| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is 84625686
Identifier: 84625686
GI number: 84625686
Start: 4541443
End: 4542141
Strand: Reverse
Name: 84625686
Synonym: XOO_4029
Alternate gene names: NA
Gene position: 4542141-4541443 (Counterclockwise)
Preceding gene: 84625688
Following gene: 84625685
Centisome position: 91.94
GC content: 68.24
Gene sequence:
>699_bases ATGTCGCACGTCGTGAGGCCGGCTCGACTGTTTGCGCAGCAGGCACACGCATCCCCCACCCGTGTCGATCTGACCATGCA TCGTCGGTCTGCGATCGGTCGTGCACGCCCCTGCGATGCCGTTCCGGCCTCGCCTGTTCGCTTTACCCCCGGAGAGATGC CCATGCTTGATCGTATTCGTCGTCGGCCGCTGCTGGCTGTCGTGTTGTCTGCGTCACTGGCCGCAGGCGGTGCCGCCAAC GCCGCCCCGCCCGTCCCAGAGGCCAAGCTTGCCGCGATGACGGCGACCTTGCGTGCAGCGCCGGTGTTTTTCGACGTGCA TTTGCCATCGCGCGATCAGGCCGGACTGGACGCATTCCTTGCGGAGGTCCAGGATCCGTTGTCGCCGCAGCATCACAAGT GGTTGTCTGCTGCCGAATTCCAACGTCGCTTCGGCCCCGCGCTGGCGCAGCTCGCGCAAGTGCGTGCCGCGTTGCAGGCC GCGCACATGCGTGTGGTGCAGCAGGGGCCGAACCTGCATGTCAGCGCGAATGCGGATGGCGTGGAGCGGCTGTTCGCTGC GCCGCTGGTCGCCGACCTGAAGCCGGCACGCCTTGCCGCCGCCGTTGCCGGCCGCGCTGCGCGCCAATGGCGTGACCGTT ACCGGCTTGACCCGCGGCCTGCCGCCGGCGCACCTGAACTCGCGGGTGGTGGCCAGTGA
Upstream 100 bases:
>100_bases GCCGATGCCGATGCCGATAGAGAAAGCTGCCGAAGATGCAGTGTGGTGATGGTGTCGCACCGCCAGCGCGCTGATTTCTT TACTCCCCTGCAGCAGGGTG
Downstream 100 bases:
>100_bases CCCCAGCAACCGCTATGGCAAGGGCACCACGAGCTATTGGTACAACGATCTCAAGCAGGCCTACGGTTATCCGTCCTACC AGACGATGATCGGCGCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Protease Protein
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MSHVVRPARLFAQQAHASPTRVDLTMHRRSAIGRARPCDAVPASPVRFTPGEMPMLDRIRRRPLLAVVLSASLAAGGAAN AAPPVPEAKLAAMTATLRAAPVFFDVHLPSRDQAGLDAFLAEVQDPLSPQHHKWLSAAEFQRRFGPALAQLAQVRAALQA AHMRVVQQGPNLHVSANADGVERLFAAPLVADLKPARLAAAVAGRAARQWRDRYRLDPRPAAGAPELAGGGQ
Sequences:
>Translated_232_residues MSHVVRPARLFAQQAHASPTRVDLTMHRRSAIGRARPCDAVPASPVRFTPGEMPMLDRIRRRPLLAVVLSASLAAGGAAN AAPPVPEAKLAAMTATLRAAPVFFDVHLPSRDQAGLDAFLAEVQDPLSPQHHKWLSAAEFQRRFGPALAQLAQVRAALQA AHMRVVQQGPNLHVSANADGVERLFAAPLVADLKPARLAAAVAGRAARQWRDRYRLDPRPAAGAPELAGGGQ >Mature_231_residues SHVVRPARLFAQQAHASPTRVDLTMHRRSAIGRARPCDAVPASPVRFTPGEMPMLDRIRRRPLLAVVLSASLAAGGAANA APPVPEAKLAAMTATLRAAPVFFDVHLPSRDQAGLDAFLAEVQDPLSPQHHKWLSAAEFQRRFGPALAQLAQVRAALQAA HMRVVQQGPNLHVSANADGVERLFAAPLVADLKPARLAAAVAGRAARQWRDRYRLDPRPAAGAPELAGGGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24748; Mature: 24617
Theoretical pI: Translated: 12.00; Mature: 12.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHVVRPARLFAQQAHASPTRVDLTMHRRSAIGRARPCDAVPASPVRFTPGEMPMLDRIR CCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCHHHHHH RRPLLAVVLSASLAAGGAANAAPPVPEAKLAAMTATLRAAPVFFDVHLPSRDQAGLDAFL HCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHH AEVQDPLSPQHHKWLSAAEFQRRFGPALAQLAQVRAALQAAHMRVVQQGPNLHVSANADG HHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHH VERLFAAPLVADLKPARLAAAVAGRAARQWRDRYRLDPRPAAGAPELAGGGQ HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SHVVRPARLFAQQAHASPTRVDLTMHRRSAIGRARPCDAVPASPVRFTPGEMPMLDRIR CCCHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCHHHHHH RRPLLAVVLSASLAAGGAANAAPPVPEAKLAAMTATLRAAPVFFDVHLPSRDQAGLDAFL HCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHH AEVQDPLSPQHHKWLSAAEFQRRFGPALAQLAQVRAALQAAHMRVVQQGPNLHVSANADG HHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHH VERLFAAPLVADLKPARLAAAVAGRAARQWRDRYRLDPRPAAGAPELAGGGQ HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA