| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84625685
Identifier: 84625685
GI number: 84625685
Start: 4540812
End: 4541510
Strand: Reverse
Name: 84625685
Synonym: XOO_4028
Alternate gene names: NA
Gene position: 4541510-4540812 (Counterclockwise)
Preceding gene: 84625686
Following gene: 84625684
Centisome position: 91.93
GC content: 63.23
Gene sequence:
>699_bases GTGACCGTTACCGGCTTGACCCGCGGCCTGCCGCCGGCGCACCTGAACTCGCGGGTGGTGGCCAGTGACCCCAGCAACCG CTATGGCAAGGGCACCACGAGCTATTGGTACAACGATCTCAAGCAGGCCTACGGTTATCCGTCCTACCAGACGATGATCG GCGCGCCGGGGCAGCAACATCGGCTCGATGGCAGCGGCAGCACGATCGCCGTCCTGATCAACAGCGACGTGCTGGATTCG GATATCGCCACGATGTTCGACCACGAGCACTTCAGCCTGTATGCCGGCAACCATGCCAATCCGACGCTCTACGCGCGCCA CTATGTGGCCGGCGCCAAGCCCGGCTTGCACGAGGGCAATGAGGCTGCGTCTATCGAGGCCACGCTCGATGTGGACATGG CCCTTGGCGGTGCACCAGGCGCGCACGTGCTCTTGTACGTGGTCCCCGACCTCAGCTCGATTCCTTGCTGGCCGGCTACC GACAGATCGTGCAGGACAATGAAGCGGACGTGGTCAGCTCTTCGTTTGGGGTCTGCGAGAAGTACTTCACCGCGGCCTAT AACAGCGGCAGAGATGCCACCTCCGTTGCTGGCCTGTTCGATGCCGTCTTCAAGCAAGGCAACGCGCAAGGCATCACCTT CGTCACCTCCAGCGGCGACAACGCCGGCCTGGAGTGCGCGGACACGCAGTACCTGGTAG
Upstream 100 bases:
>100_bases GCGGATGGCGTGGAGCGGCTGTTCGCTGCGCCGCTGGTCGCCGACCTGAAGCCGGCACGCCTTGCCGCCGCCGTTGCCGG CCGCGCTGCGCGCCAATGGC
Downstream 100 bases:
>100_bases AGGGCAATAATGGCCGTTACATCCCAGGTGTGGAATTTCCGGCCGCCGATGCGCATGTGACCGCGGTCGGTGGTGGCAAC CTGTTCACCGCTTACAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Proteinase
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MTVTGLTRGLPPAHLNSRVVASDPSNRYGKGTTSYWYNDLKQAYGYPSYQTMIGAPGQQHRLDGSGSTIAVLINSDVLDS DIATMFDHEHFSLYAGNHANPTLYARHYVAGAKPGLHEGNEAASIEATLDVDMALGGAPGAHVLLYVVPDLSSIPCWPAT DRSCRTMKRTWSALRLGSARSTSPRPITAAEMPPPLLACSMPSSSKATRKASPSSPPAATTPAWSARTRSTW
Sequences:
>Translated_232_residues MTVTGLTRGLPPAHLNSRVVASDPSNRYGKGTTSYWYNDLKQAYGYPSYQTMIGAPGQQHRLDGSGSTIAVLINSDVLDS DIATMFDHEHFSLYAGNHANPTLYARHYVAGAKPGLHEGNEAASIEATLDVDMALGGAPGAHVLLYVVPDLSSIPCWPAT DRSCRTMKRTWSALRLGSARSTSPRPITAAEMPPPLLACSMPSSSKATRKASPSSPPAATTPAWSARTRSTW >Mature_231_residues TVTGLTRGLPPAHLNSRVVASDPSNRYGKGTTSYWYNDLKQAYGYPSYQTMIGAPGQQHRLDGSGSTIAVLINSDVLDSD IATMFDHEHFSLYAGNHANPTLYARHYVAGAKPGLHEGNEAASIEATLDVDMALGGAPGAHVLLYVVPDLSSIPCWPATD RSCRTMKRTWSALRLGSARSTSPRPITAAEMPPPLLACSMPSSSKATRKASPSSPPAATTPAWSARTRSTW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24756; Mature: 24625
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVTGLTRGLPPAHLNSRVVASDPSNRYGKGTTSYWYNDLKQAYGYPSYQTMIGAPGQQH CCCCCCCCCCCCHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHEECCCCCCE RLDGSGSTIAVLINSDVLDSDIATMFDHEHFSLYAGNHANPTLYARHYVAGAKPGLHEGN EECCCCCEEEEEEECCCCCHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCC EAASIEATLDVDMALGGAPGAHVLLYVVPDLSSIPCWPATDRSCRTMKRTWSALRLGSAR CCEEEEEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC STSPRPITAAEMPPPLLACSMPSSSKATRKASPSSPPAATTPAWSARTRSTW CCCCCCEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TVTGLTRGLPPAHLNSRVVASDPSNRYGKGTTSYWYNDLKQAYGYPSYQTMIGAPGQQH CCCCCCCCCCCHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHEECCCCCCE RLDGSGSTIAVLINSDVLDSDIATMFDHEHFSLYAGNHANPTLYARHYVAGAKPGLHEGN EECCCCCEEEEEEECCCCCHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCC EAASIEATLDVDMALGGAPGAHVLLYVVPDLSSIPCWPATDRSCRTMKRTWSALRLGSAR CCEEEEEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC STSPRPITAAEMPPPLLACSMPSSSKATRKASPSSPPAATTPAWSARTRSTW CCCCCCEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA