| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84625660
Identifier: 84625660
GI number: 84625660
Start: 4512024
End: 4512482
Strand: Reverse
Name: 84625660
Synonym: XOO_4003
Alternate gene names: NA
Gene position: 4512482-4512024 (Counterclockwise)
Preceding gene: 84625661
Following gene: 84625658
Centisome position: 91.34
GC content: 65.58
Gene sequence:
>459_bases ATGGACGTAGGCAGGCACCGCGCAAGCAATTCACGCAGTTGCGGCAAGCCCCGTCTGGCGGTGCCCATGCTGGGAGTGCT GGCGATCGATGCTGCGGTGACCTATCGCATGGCGCTGGCCGATGGTCCCATCGACATCGCACCGCACGCTCCAGGACACT CCAGCGGAAGAGGGCAGCAGATACCGAATGCATCACAGGATGGGTGCCACGGTAGGCACGCGACCTTTCGGCCTCCTTTC CGCAAGCCAACCAAATGCGCACGGCCTGGTTGGCTTCACAGCGGTCAGGGAGGTGCTGCCAGTTCGTGCATCGGCGGCGG TGCCGTGACGGCAGACCTGCGCGCGGTCGGCGGGAATTCGGCGCGAATGCTTGCACCGGTCGGCGAGTGCATTCTGCTAA GGGGCAGTGCGATCCACGTGTGCGCCGCGCTGGCGCCAGGCGACGTAGCGCATCGATGA
Upstream 100 bases:
>100_bases CCCCCTGGTCTGCGGGGCTTTTTATTTGTGTCTTCCTGATCGTATGCCACCGCTGCAACGCTAATCGCGCTGCTGCATAT GCGTTGACACAACGCAATGG
Downstream 100 bases:
>100_bases TGCACGGTTGATCTGGCCGTCAGCGGGCAGCGCATCTGCTCACGACGCGCGCTGCAACGTTTCCGCTATTGCCATCGCCG CGTGGACGTCCGCAAGGACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MDVGRHRASNSRSCGKPRLAVPMLGVLAIDAAVTYRMALADGPIDIAPHAPGHSSGRGQQIPNASQDGCHGRHATFRPPF RKPTKCARPGWLHSGQGGAASSCIGGGAVTADLRAVGGNSARMLAPVGECILLRGSAIHVCAALAPGDVAHR
Sequences:
>Translated_152_residues MDVGRHRASNSRSCGKPRLAVPMLGVLAIDAAVTYRMALADGPIDIAPHAPGHSSGRGQQIPNASQDGCHGRHATFRPPF RKPTKCARPGWLHSGQGGAASSCIGGGAVTADLRAVGGNSARMLAPVGECILLRGSAIHVCAALAPGDVAHR >Mature_152_residues MDVGRHRASNSRSCGKPRLAVPMLGVLAIDAAVTYRMALADGPIDIAPHAPGHSSGRGQQIPNASQDGCHGRHATFRPPF RKPTKCARPGWLHSGQGGAASSCIGGGAVTADLRAVGGNSARMLAPVGECILLRGSAIHVCAALAPGDVAHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15511; Mature: 15511
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVGRHRASNSRSCGKPRLAVPMLGVLAIDAAVTYRMALADGPIDIAPHAPGHSSGRGQQ CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCEEECCCCCCCCCCCCCC IPNASQDGCHGRHATFRPPFRKPTKCARPGWLHSGQGGAASSCIGGGAVTADLRAVGGNS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC ARMLAPVGECILLRGSAIHVCAALAPGDVAHR CEEECCCCCEEEECCCCEEEEEECCCCCCCCC >Mature Secondary Structure MDVGRHRASNSRSCGKPRLAVPMLGVLAIDAAVTYRMALADGPIDIAPHAPGHSSGRGQQ CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCEEECCCCCCCCCCCCCC IPNASQDGCHGRHATFRPPFRKPTKCARPGWLHSGQGGAASSCIGGGAVTADLRAVGGNS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC ARMLAPVGECILLRGSAIHVCAALAPGDVAHR CEEECCCCCEEEECCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA