| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is ppc [H]
Identifier: 84625235
GI number: 84625235
Start: 4045283
End: 4047997
Strand: Reverse
Name: ppc [H]
Synonym: XOO_3578
Alternate gene names: 84625235
Gene position: 4047997-4045283 (Counterclockwise)
Preceding gene: 84625237
Following gene: 84625234
Centisome position: 81.94
GC content: 67.59
Gene sequence:
>2715_bases ATGAACGAGTACCGCAGCAGTCTTGTGTTCGCTACCCCCGATCTTCCCTTGCGCGACGATGTGCGTCGGCTCGGTGCACT GGTGGGTGATCTGCTCGCCGAGCAGGTGTCTGCGGAATTCCTCGATGAAATCGAACGCGTGCGCACCACCGCCATCTCGC GGCGCGAAAGCGATGCCCCGCCCTCCACGTTGAGCGAACAACTCACCGGGCGCGAGCCGCGTGATGCCGAAGCGCTGGTG CGCGCCTTCAGTACCTATTTCCAGGTCGTCAATATCGCCGAGCGCGTGCACCGCATCCGCCGCCGCCGCGAGTACCAGCG CAGCGGGACCGACACGCCGCAGCCGGATGGCCTGCACGACGCATTGCGTCGGCTCAAGGCGCAGGGCGTGACGCTGGACG AACTCAGCCAGTGGTTGCCGCGCATCGATGTGGAGCCGGTGTTCACCGCGCATCCCACCGAGGCGGTGCGCCGCGCGCTG CTGGAAAAAGAGCAGCTGATGGTCGCCAGCCTGGTCGACAACCTGGACGGCATGCGCACGCCCAATGAGCGCACCAGCGA TGCGGCACGTTTCCGCATGGCGTTGACCGCATCGTGGCAGACCGCCGATTCCTCGCCGGTGCGCCCCACCGTGGGCGACG AGCGCGAGCATGTGGGCTTCTATCTCACCCAGGTGCTCTACCGCGTCATCCCGGTGATGTACGAAACCCTCGAACACGCC ATCGAAGAAACCTATGGCAGCGTGCCAGCCCTGCCGCGCCTGCTGCGTTTCGGCACCTGGGTGGGCGGCGACATGGACGG CAATCCCAATGTGGATGCCAACACCATCGCCGGCACCCTGGATGCACAACGGCGCGCGGTGCTGGACCGCTATCAAAAGG AACTCTGGCAGCTGGCCAGCCTGCTCAGTCAATCGACCACGCTGGTGCAGGTGAGCCCGGAACTCATGACGCAGCTGGAA CGCTATCGCGCGCTGCTGCCCGACGCCGCGGCACGGTCGCGTCCACGTCACGGCGACATGCCGTACCGCCTGCTCAACGA CCTGATGCGCGCCCGCCTGCAGGCCACACTGGACGACGCCGACGGCGCCTATACCGCCCCTTCTGAACTCGAAGACGATC TGCAGTTGATCCTGGACAGCCTGCAGGCCAACAAGGGCCTGCACGCCGGTTGGTTCGCCGTGCGGCGTCTGCTGTGGCGT GTGCGCAGTTTCGGTTTCCATCTGGCGCGGCTGGACGTGCGCCAGGAATCGAGCGTGCATGCGCGCGCGGTGGCCGATGC CTTGGGCCAGACCGACTGGGACGCGCAGGACGCAACCCGGCGCGCCGCCGTGCTCGGCCCGTATGCCTGCGGGCAAGAAG CCTTGCCGCGCGTGCAGGATGAAGGCAATGCGCGGCTGGACGCGGTATTCGCCGCGCTCGCCGATGCACGCACGCGCCAC GGTGCCGATGCACTGGGCAGCTACATCATTTCGATGGCGCACAACCGCGCCGACGTGCTCACTGTGCTGGCGCTGGCGCG CCGCGGCGGATTGGTCGACGCCGCCGGCGCCGTGCCGCTAGATATCGTGCCGCTGTTCGAAACCGTGGACGACCTGCGCG GCGGCACCGGCACGGTGCAGGACCTGCTGGCCGACCCGGTATATCGCCAGCATCTGGCCGCGCGCGGCGATACGCAGATG GTGATGTTGGGGTATTCGGATAGCGGCAAGGACGGCGGCATCGCCGCCTCGCGCTGGGGGCTGCAGCGTGCGCAGGTGGA ACTGCTGGAAGCCGCTGCCGATCTGGGCGTGCGGCTGACCTTCTTCCACGGCCGTGGCGGTTCGATCGCGCGCGGTGGCG GCAAGACCAGCCGCGCGCTGGACGCCGCCCCGCGCGGCAGCGTCGATGGCCGCCTGCGCGTCACCGAGCAGGGCGAGGTG ATCCACCGCAAGTACGGCATCCGTGCATTGGCCTTGCGCTCGCTGGAGCAGATGACCGGCGCGGTGTTGCTTTCGAGCCT GCGCCCGCGTGCGCCCGAGCCGCGCGAGGCGCGCTGGCGCCCGGTGATGGATCTGGTGGCCGAACGCAGCACCGTCGCGT ATCGCGCCTTCGTCGCCGCGCCGGAGTTCATGCAGTACTTCCGCCTGGCCACGCCGATCGATGTGATCGAACGCATGACG CTGGGCTCGCGGCCCTCGCGGCGGCTGGGGCAGGACGCGGCGTTGTCCAACCTGCGTGCGATTCCGTGGGTGTTCGCCTG GAGCCAGGCACGTGCGGTGATTCCCGGCTGGTACGGCGTGGGCAGCGGCCTGCAGGCGGCGGTGGATGCCGGGCATGAAG ACAGCCTGCGCGAAATGGCGCAGGACTGGCCGTTCTTCCGCACCTTTCTGGACGATGTCGCCATGGTGCTGTCCAAGGGC GATCTGAATATCGCCGAGTTGTTTTCGCGCTTGTCCGGCGACTTGCACACGCGGTTTTTCCCGCTGATTCGCGACGAACT GGCCTTGACCAAGGGCTGGGTCAAGGCACTGCTGCAGCAGCAGTCGCTGTTGCAGCACGACCCGCGGCTGGCGTTGTCGA TCCGCCTGCGCAACCCGTACATCGACCCGATCAGCGTGCTGCAGGTAGACCTGCTGCAGCGCTGGCGCGCTACCGATGGC GAAGACGAAGCGCTGCTGCGCGCGCTGGTGGCCTGCGTCAACGGCGTCTCGCAAGGTTTGCAGAACACTGGTTGA
Upstream 100 bases:
>100_bases CAAGATGGTTCGCTCTGAAACAGTCTTGTGCGTCGCAACACTCTAATCCTTTTGGGTTAGTCTTCGACGACTTTGCGCTT GAAGAGGGTGTGCGTTTCCG
Downstream 100 bases:
>100_bases GCGAGCCGCGCGCTGCGGGGCCGAGTGGCGGGCAATTCCACCGCAAAGCAACGGCGACCATGCGGTTGGTCGGCGAGGGC GCGCAACCGGCAAGCGGGCT
Product: phosphoenolpyruvate carboxylase
Products: NA
Alternate protein names: PEPC; PEPCase [H]
Number of amino acids: Translated: 904; Mature: 904
Protein sequence:
>904_residues MNEYRSSLVFATPDLPLRDDVRRLGALVGDLLAEQVSAEFLDEIERVRTTAISRRESDAPPSTLSEQLTGREPRDAEALV RAFSTYFQVVNIAERVHRIRRRREYQRSGTDTPQPDGLHDALRRLKAQGVTLDELSQWLPRIDVEPVFTAHPTEAVRRAL LEKEQLMVASLVDNLDGMRTPNERTSDAARFRMALTASWQTADSSPVRPTVGDEREHVGFYLTQVLYRVIPVMYETLEHA IEETYGSVPALPRLLRFGTWVGGDMDGNPNVDANTIAGTLDAQRRAVLDRYQKELWQLASLLSQSTTLVQVSPELMTQLE RYRALLPDAAARSRPRHGDMPYRLLNDLMRARLQATLDDADGAYTAPSELEDDLQLILDSLQANKGLHAGWFAVRRLLWR VRSFGFHLARLDVRQESSVHARAVADALGQTDWDAQDATRRAAVLGPYACGQEALPRVQDEGNARLDAVFAALADARTRH GADALGSYIISMAHNRADVLTVLALARRGGLVDAAGAVPLDIVPLFETVDDLRGGTGTVQDLLADPVYRQHLAARGDTQM VMLGYSDSGKDGGIAASRWGLQRAQVELLEAAADLGVRLTFFHGRGGSIARGGGKTSRALDAAPRGSVDGRLRVTEQGEV IHRKYGIRALALRSLEQMTGAVLLSSLRPRAPEPREARWRPVMDLVAERSTVAYRAFVAAPEFMQYFRLATPIDVIERMT LGSRPSRRLGQDAALSNLRAIPWVFAWSQARAVIPGWYGVGSGLQAAVDAGHEDSLREMAQDWPFFRTFLDDVAMVLSKG DLNIAELFSRLSGDLHTRFFPLIRDELALTKGWVKALLQQQSLLQHDPRLALSIRLRNPYIDPISVLQVDLLQRWRATDG EDEALLRALVACVNGVSQGLQNTG
Sequences:
>Translated_904_residues MNEYRSSLVFATPDLPLRDDVRRLGALVGDLLAEQVSAEFLDEIERVRTTAISRRESDAPPSTLSEQLTGREPRDAEALV RAFSTYFQVVNIAERVHRIRRRREYQRSGTDTPQPDGLHDALRRLKAQGVTLDELSQWLPRIDVEPVFTAHPTEAVRRAL LEKEQLMVASLVDNLDGMRTPNERTSDAARFRMALTASWQTADSSPVRPTVGDEREHVGFYLTQVLYRVIPVMYETLEHA IEETYGSVPALPRLLRFGTWVGGDMDGNPNVDANTIAGTLDAQRRAVLDRYQKELWQLASLLSQSTTLVQVSPELMTQLE RYRALLPDAAARSRPRHGDMPYRLLNDLMRARLQATLDDADGAYTAPSELEDDLQLILDSLQANKGLHAGWFAVRRLLWR VRSFGFHLARLDVRQESSVHARAVADALGQTDWDAQDATRRAAVLGPYACGQEALPRVQDEGNARLDAVFAALADARTRH GADALGSYIISMAHNRADVLTVLALARRGGLVDAAGAVPLDIVPLFETVDDLRGGTGTVQDLLADPVYRQHLAARGDTQM VMLGYSDSGKDGGIAASRWGLQRAQVELLEAAADLGVRLTFFHGRGGSIARGGGKTSRALDAAPRGSVDGRLRVTEQGEV IHRKYGIRALALRSLEQMTGAVLLSSLRPRAPEPREARWRPVMDLVAERSTVAYRAFVAAPEFMQYFRLATPIDVIERMT LGSRPSRRLGQDAALSNLRAIPWVFAWSQARAVIPGWYGVGSGLQAAVDAGHEDSLREMAQDWPFFRTFLDDVAMVLSKG DLNIAELFSRLSGDLHTRFFPLIRDELALTKGWVKALLQQQSLLQHDPRLALSIRLRNPYIDPISVLQVDLLQRWRATDG EDEALLRALVACVNGVSQGLQNTG >Mature_904_residues MNEYRSSLVFATPDLPLRDDVRRLGALVGDLLAEQVSAEFLDEIERVRTTAISRRESDAPPSTLSEQLTGREPRDAEALV RAFSTYFQVVNIAERVHRIRRRREYQRSGTDTPQPDGLHDALRRLKAQGVTLDELSQWLPRIDVEPVFTAHPTEAVRRAL LEKEQLMVASLVDNLDGMRTPNERTSDAARFRMALTASWQTADSSPVRPTVGDEREHVGFYLTQVLYRVIPVMYETLEHA IEETYGSVPALPRLLRFGTWVGGDMDGNPNVDANTIAGTLDAQRRAVLDRYQKELWQLASLLSQSTTLVQVSPELMTQLE RYRALLPDAAARSRPRHGDMPYRLLNDLMRARLQATLDDADGAYTAPSELEDDLQLILDSLQANKGLHAGWFAVRRLLWR VRSFGFHLARLDVRQESSVHARAVADALGQTDWDAQDATRRAAVLGPYACGQEALPRVQDEGNARLDAVFAALADARTRH GADALGSYIISMAHNRADVLTVLALARRGGLVDAAGAVPLDIVPLFETVDDLRGGTGTVQDLLADPVYRQHLAARGDTQM VMLGYSDSGKDGGIAASRWGLQRAQVELLEAAADLGVRLTFFHGRGGSIARGGGKTSRALDAAPRGSVDGRLRVTEQGEV IHRKYGIRALALRSLEQMTGAVLLSSLRPRAPEPREARWRPVMDLVAERSTVAYRAFVAAPEFMQYFRLATPIDVIERMT LGSRPSRRLGQDAALSNLRAIPWVFAWSQARAVIPGWYGVGSGLQAAVDAGHEDSLREMAQDWPFFRTFLDDVAMVLSKG DLNIAELFSRLSGDLHTRFFPLIRDELALTKGWVKALLQQQSLLQHDPRLALSIRLRNPYIDPISVLQVDLLQRWRATDG EDEALLRALVACVNGVSQGLQNTG
Specific function: Through the carboxylation of phosphoenolpyruvate (PEP) it forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle [H]
COG id: COG2352
COG function: function code C; Phosphoenolpyruvate carboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEPCase type 1 family [H]
Homologues:
Organism=Escherichia coli, GI1790393, Length=917, Percent_Identity=34.0239912758997, Blast_Score=409, Evalue=1e-115,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021135 - InterPro: IPR018129 - InterPro: IPR022805 - InterPro: IPR015813 [H]
Pfam domain/function: PF00311 PEPcase [H]
EC number: =4.1.1.31 [H]
Molecular weight: Translated: 100269; Mature: 100269
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: PS00781 PEPCASE_1 ; PS00393 PEPCASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEYRSSLVFATPDLPLRDDVRRLGALVGDLLAEQVSAEFLDEIERVRTTAISRRESDAP CCCHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PSTLSEQLTGREPRDAEALVRAFSTYFQVVNIAERVHRIRRRREYQRSGTDTPQPDGLHD HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH ALRRLKAQGVTLDELSQWLPRIDVEPVFTAHPTEAVRRALLEKEQLMVASLVDNLDGMRT HHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC PNERTSDAARFRMALTASWQTADSSPVRPTVGDEREHVGFYLTQVLYRVIPVMYETLEHA CCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IEETYGSVPALPRLLRFGTWVGGDMDGNPNVDANTIAGTLDAQRRAVLDRYQKELWQLAS HHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLSQSTTLVQVSPELMTQLERYRALLPDAAARSRPRHGDMPYRLLNDLMRARLQATLDDA HHHCCCEEEEECHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC DGAYTAPSELEDDLQLILDSLQANKGLHAGWFAVRRLLWRVRSFGFHLARLDVRQESSVH CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHH ARAVADALGQTDWDAQDATRRAAVLGPYACGQEALPRVQDEGNARLDAVFAALADARTRH HHHHHHHHCCCCCCHHHHHHHHHHHCCHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHC GADALGSYIISMAHNRADVLTVLALARRGGLVDAAGAVPLDIVPLFETVDDLRGGTGTVQ CHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHCCCCCHHH DLLADPVYRQHLAARGDTQMVMLGYSDSGKDGGIAASRWGLQRAQVELLEAAADLGVRLT HHHHCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEE FFHGRGGSIARGGGKTSRALDAAPRGSVDGRLRVTEQGEVIHRKYGIRALALRSLEQMTG EEECCCCCCCCCCCCCHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH AVLLSSLRPRAPEPREARWRPVMDLVAERSTVAYRAFVAAPEFMQYFRLATPIDVIERMT HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHH LGSRPSRRLGQDAALSNLRAIPWVFAWSQARAVIPGWYGVGSGLQAAVDAGHEDSLREMA CCCCCHHHHCCHHHHHHCHHHHHHHHHCCCCEECCCCCCCCCCHHHHHCCCCHHHHHHHH QDWPFFRTFLDDVAMVLSKGDLNIAELFSRLSGDLHTRFFPLIRDELALTKGWVKALLQQ HHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QSLLQHDPRLALSIRLRNPYIDPISVLQVDLLQRWRATDGEDEALLRALVACVNGVSQGL HHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH QNTG CCCC >Mature Secondary Structure MNEYRSSLVFATPDLPLRDDVRRLGALVGDLLAEQVSAEFLDEIERVRTTAISRRESDAP CCCHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PSTLSEQLTGREPRDAEALVRAFSTYFQVVNIAERVHRIRRRREYQRSGTDTPQPDGLHD HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH ALRRLKAQGVTLDELSQWLPRIDVEPVFTAHPTEAVRRALLEKEQLMVASLVDNLDGMRT HHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC PNERTSDAARFRMALTASWQTADSSPVRPTVGDEREHVGFYLTQVLYRVIPVMYETLEHA CCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IEETYGSVPALPRLLRFGTWVGGDMDGNPNVDANTIAGTLDAQRRAVLDRYQKELWQLAS HHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLSQSTTLVQVSPELMTQLERYRALLPDAAARSRPRHGDMPYRLLNDLMRARLQATLDDA HHHCCCEEEEECHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC DGAYTAPSELEDDLQLILDSLQANKGLHAGWFAVRRLLWRVRSFGFHLARLDVRQESSVH CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHH ARAVADALGQTDWDAQDATRRAAVLGPYACGQEALPRVQDEGNARLDAVFAALADARTRH HHHHHHHHCCCCCCHHHHHHHHHHHCCHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHC GADALGSYIISMAHNRADVLTVLALARRGGLVDAAGAVPLDIVPLFETVDDLRGGTGTVQ CHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHCCCCCHHH DLLADPVYRQHLAARGDTQMVMLGYSDSGKDGGIAASRWGLQRAQVELLEAAADLGVRLT HHHHCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEE FFHGRGGSIARGGGKTSRALDAAPRGSVDGRLRVTEQGEVIHRKYGIRALALRSLEQMTG EEECCCCCCCCCCCCCHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH AVLLSSLRPRAPEPREARWRPVMDLVAERSTVAYRAFVAAPEFMQYFRLATPIDVIERMT HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHH LGSRPSRRLGQDAALSNLRAIPWVFAWSQARAVIPGWYGVGSGLQAAVDAGHEDSLREMA CCCCCHHHHCCHHHHHHCHHHHHHHHHCCCCEECCCCCCCCCCHHHHHCCCCHHHHHHHH QDWPFFRTFLDDVAMVLSKGDLNIAELFSRLSGDLHTRFFPLIRDELALTKGWVKALLQQ HHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QSLLQHDPRLALSIRLRNPYIDPISVLQVDLLQRWRATDGEDEALLRALVACVNGVSQGL HHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH QNTG CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]