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The map label for this gene is qseC [H]

Identifier: 84625208

GI number: 84625208

Start: 4011563

End: 4012834

Strand: Reverse

Name: qseC [H]

Synonym: XOO_3551

Alternate gene names: 84625208

Gene position: 4012834-4011563 (Counterclockwise)

Preceding gene: 84625209

Following gene: 84625207

Centisome position: 81.23

GC content: 64.78

Gene sequence:

>1272_bases
ATGCCACACGGGCTCCCGCGAAAAATACGTCTCGCCTTCCTGCTGCAGGTCGCGTTGGCAAGCCTGGCCCTCGTGCTGGC
CGGGTATCTGGTGTCGTTCGTCATCAAATACAGCCTGGTGCGCACCGTGCTTGCCGACGAGGCGGTGCATTTCTGGCAGA
TGCAAAAGAGCGTCCCGGACAACCGAGCGCCGAACACGCGCAACATCCAGGGGTATTTTTCGCCCGCCGGCACTGCCGCC
GATACCGCGCCGGCCGCGCTGCGTACGCTGTCGCCGGGTTTCAGCGAAGTCGCTGCCGCCGATGCGCTGGTGTATGTCGA
TCAACGCCCGGAGGGGCGGCTGTATCTGGTGTTTCCGCGCTCGCGTGCGGCGCATTTGACGCTGTGGTTCGGCGTGGTGC
CGGCGATCGTGGTGTTGCTGGCGATCTACGGCGTGTCCTGGTTTACCTACCGTGTCTCCAAACGGCTGGTCTCGCCGATC
AGCTGGCTGGCGCGGCGTGTGTCGCAGTGGGACCCACGTAACCCGGATGTGGACGAACTGGCGCCGGAGCGGCTGCCTGC
CGAATTACAGGGCGAAACCCGCCAGCTTGCCGCCGCCTTGCATGCCTTAGGACGACGCGTCAGCGAGCATGTGGCACGCG
AACGCAATTTCACCCGCGATGCCAGCCATGAATTGCGTACGCCACTCACGGTGATCCGCGTGGCCAGCGACATGGCATTG
GCCGACGACGAATTGTCGACGCGCACCCAACGCAGCCTGCGCCGCATCCAACGCGCCGGTCACGAAATGGAAGCGGTGAT
CGACGCGTTCCTGATCCTGGCACGCGAAGCCGAGGTCGATCCGCAATGCGAAAACTTCGATGTCGCCGAACTGGCCACGG
AAGAAGTCGAGAGCGCGCGTGACTTGCTCGGCGACAAGCCGGTGTCGTTGCGCATGGTCGGCAACCGCAGCCTGCAGATG
TTCGCACCACCCAGGGTCATGCGGGTGGTGCTCAGCAATCTGTTACGTAACGCCTGCGCTTATACCGATACCGGCAGCAT
CGACGTCGAGGTCACGCACGACCGCATCGTGGTGCGCGACACCGGCATCGGCATGAGCCAGGAAGCGCGCGCACGCGCGT
TCGAACCGTTCTTCCGTGCCGACCCCACCCGACCGCAAGGCACCGGCCTGGGTCTGTCGATCGTGCGCCGGCTGTGCGAC
CGCTTCGGCTGGCGTATCGAATTGCACAGCGAACCCGGCGCCGGGACCTCAGTAGCGGTGGTGTTGGCCTGA

Upstream 100 bases:

>100_bases
GGCGCCCACGCGCCGATCGCTTTCCTGTGCTGCCGGCTGGTTGCACGACGGACTCACGGAAGCGTTGCCTATACTCCGGC
GCTCTCCCCTGGATGCAGCA

Downstream 100 bases:

>100_bases
GGTAGCGGTCGGTAGCAGGGCGCGGGCTGCCTGCGCCTTGTTGTCGGCGACGCAACCCGGCTGCGGATACCAGAAAAGCG
TACGAGCGGCTGCTGCATGC

Product: two-component system sensor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 422

Protein sequence:

>423_residues
MPHGLPRKIRLAFLLQVALASLALVLAGYLVSFVIKYSLVRTVLADEAVHFWQMQKSVPDNRAPNTRNIQGYFSPAGTAA
DTAPAALRTLSPGFSEVAAADALVYVDQRPEGRLYLVFPRSRAAHLTLWFGVVPAIVVLLAIYGVSWFTYRVSKRLVSPI
SWLARRVSQWDPRNPDVDELAPERLPAELQGETRQLAAALHALGRRVSEHVARERNFTRDASHELRTPLTVIRVASDMAL
ADDELSTRTQRSLRRIQRAGHEMEAVIDAFLILAREAEVDPQCENFDVAELATEEVESARDLLGDKPVSLRMVGNRSLQM
FAPPRVMRVVLSNLLRNACAYTDTGSIDVEVTHDRIVVRDTGIGMSQEARARAFEPFFRADPTRPQGTGLGLSIVRRLCD
RFGWRIELHSEPGAGTSVAVVLA

Sequences:

>Translated_423_residues
MPHGLPRKIRLAFLLQVALASLALVLAGYLVSFVIKYSLVRTVLADEAVHFWQMQKSVPDNRAPNTRNIQGYFSPAGTAA
DTAPAALRTLSPGFSEVAAADALVYVDQRPEGRLYLVFPRSRAAHLTLWFGVVPAIVVLLAIYGVSWFTYRVSKRLVSPI
SWLARRVSQWDPRNPDVDELAPERLPAELQGETRQLAAALHALGRRVSEHVARERNFTRDASHELRTPLTVIRVASDMAL
ADDELSTRTQRSLRRIQRAGHEMEAVIDAFLILAREAEVDPQCENFDVAELATEEVESARDLLGDKPVSLRMVGNRSLQM
FAPPRVMRVVLSNLLRNACAYTDTGSIDVEVTHDRIVVRDTGIGMSQEARARAFEPFFRADPTRPQGTGLGLSIVRRLCD
RFGWRIELHSEPGAGTSVAVVLA
>Mature_422_residues
PHGLPRKIRLAFLLQVALASLALVLAGYLVSFVIKYSLVRTVLADEAVHFWQMQKSVPDNRAPNTRNIQGYFSPAGTAAD
TAPAALRTLSPGFSEVAAADALVYVDQRPEGRLYLVFPRSRAAHLTLWFGVVPAIVVLLAIYGVSWFTYRVSKRLVSPIS
WLARRVSQWDPRNPDVDELAPERLPAELQGETRQLAAALHALGRRVSEHVARERNFTRDASHELRTPLTVIRVASDMALA
DDELSTRTQRSLRRIQRAGHEMEAVIDAFLILAREAEVDPQCENFDVAELATEEVESARDLLGDKPVSLRMVGNRSLQMF
APPRVMRVVLSNLLRNACAYTDTGSIDVEVTHDRIVVRDTGIGMSQEARARAFEPFFRADPTRPQGTGLGLSIVRRLCDR
FGWRIELHSEPGAGTSVAVVLA

Specific function: Member of a two-component regulatory system qseB/qseC. Activates the flagella regulon by activating transcription of flhDC. May activate qseB by phosphorylation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1786783, Length=316, Percent_Identity=26.8987341772152, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1789403, Length=307, Percent_Identity=29.9674267100977, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1789149, Length=234, Percent_Identity=28.2051282051282, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI145693157, Length=239, Percent_Identity=28.4518828451883, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI48994928, Length=232, Percent_Identity=29.7413793103448, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1786600, Length=220, Percent_Identity=28.6363636363636, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI87082128, Length=297, Percent_Identity=27.2727272727273, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1788713, Length=253, Percent_Identity=24.901185770751, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1787894, Length=246, Percent_Identity=28.4552845528455, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1789808, Length=287, Percent_Identity=26.4808362369338, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI87081816, Length=253, Percent_Identity=27.6679841897233, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1790346, Length=217, Percent_Identity=29.0322580645161, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1788393, Length=243, Percent_Identity=25.5144032921811, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1790861, Length=263, Percent_Identity=27.3764258555133, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 46959; Mature: 46828

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHGLPRKIRLAFLLQVALASLALVLAGYLVSFVIKYSLVRTVLADEAVHFWQMQKSVPD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NRAPNTRNIQGYFSPAGTAADTAPAALRTLSPGFSEVAAADALVYVDQRPEGRLYLVFPR
CCCCCCCCCEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHCEEEEEECCCCCCEEEEECC
SRAAHLTLWFGVVPAIVVLLAIYGVSWFTYRVSKRLVSPISWLARRVSQWDPRNPDVDEL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
APERLPAELQGETRQLAAALHALGRRVSEHVARERNFTRDASHELRTPLTVIRVASDMAL
CHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHH
ADDELSTRTQRSLRRIQRAGHEMEAVIDAFLILAREAEVDPQCENFDVAELATEEVESAR
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
DLLGDKPVSLRMVGNRSLQMFAPPRVMRVVLSNLLRNACAYTDTGSIDVEVTHDRIVVRD
HHHCCCCEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEE
TGIGMSQEARARAFEPFFRADPTRPQGTGLGLSIVRRLCDRFGWRIELHSEPGAGTSVAV
CCCCCCHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCEEE
VLA
EEC
>Mature Secondary Structure 
PHGLPRKIRLAFLLQVALASLALVLAGYLVSFVIKYSLVRTVLADEAVHFWQMQKSVPD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NRAPNTRNIQGYFSPAGTAADTAPAALRTLSPGFSEVAAADALVYVDQRPEGRLYLVFPR
CCCCCCCCCEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHCEEEEEECCCCCCEEEEECC
SRAAHLTLWFGVVPAIVVLLAIYGVSWFTYRVSKRLVSPISWLARRVSQWDPRNPDVDEL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
APERLPAELQGETRQLAAALHALGRRVSEHVARERNFTRDASHELRTPLTVIRVASDMAL
CHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHH
ADDELSTRTQRSLRRIQRAGHEMEAVIDAFLILAREAEVDPQCENFDVAELATEEVESAR
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
DLLGDKPVSLRMVGNRSLQMFAPPRVMRVVLSNLLRNACAYTDTGSIDVEVTHDRIVVRD
HHHCCCCEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEE
TGIGMSQEARARAFEPFFRADPTRPQGTGLGLSIVRRLCDRFGWRIELHSEPGAGTSVAV
CCCCCCHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCEEE
VLA
EEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796; 11929534 [H]