| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is 84625167
Identifier: 84625167
GI number: 84625167
Start: 3972685
End: 3973194
Strand: Reverse
Name: 84625167
Synonym: XOO_3511
Alternate gene names: NA
Gene position: 3973194-3972685 (Counterclockwise)
Preceding gene: 84625172
Following gene: 84625166
Centisome position: 80.43
GC content: 64.31
Gene sequence:
>510_bases TTGGCGATCGAATACGCCGACCACGACACCAGCGCACCCGCCGCGCACAGCAGGCCGGCAATGTGGGTAAGGTGGCCGCT CGCTCGCTCGCTCGCTCGCTTGCTGGCCGGAGTCGTCCTGCACGGTGTCCAGTGCCACCAATGCCACGCCCATCACGCAC AACACGCACAACACGCACAACACGCAGGGCGCCGCCAGACGGCGCAATTGCACCGCGCCTGCGGTGCGCGTGCCGATCAC GGTGACCACGACCGGCAACAGCCCGATGATCAATGCAGTCGCCGCACTGCCCGCCCACTGCACGGCGCTGCCAAGCAGCA GGTAATAAATCAGATTGCCCATCAGGCTCAGGCGCACCAGCGCCCACCATTCAGCGCGACCCAGGCGGGCACCGGTCTGT CGCGCGCGTGGCGCCAGTACCAACGCCGCTATCGCGCCGTAAGAACCTGTTCACAATCTTATTCAAACCGTGCAAACTCC ACGAATGCGCGAGAAGAACTATCCAAGTGA
Upstream 100 bases:
>100_bases GGCCGGCGCCAGCAATAACGCCAGTGCGCCGGTGACCACGCTGGTGAGCAGCGACCAGTCGCCGCCGGACAGATCCGGGC GCCGCCGCAACCAGCGCGCA
Downstream 100 bases:
>100_bases CGTGAGCCGTGAGCGGTTCGAGCAAATCCGCCCGATTCTGGAGCAAGCCCGCAAGCGCACCAAGCCTGTGACAGTGGATA TGTATGAGGTGTGGTGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MAIEYADHDTSAPAAHSRPAMWVRWPLARSLARLLAGVVLHGVQCHQCHAHHAQHAQHAQHAGRRQTAQLHRACGARADH GDHDRQQPDDQCSRRTARPLHGAAKQQVINQIAHQAQAHQRPPFSATQAGTGLSRAWRQYQRRYRAVRTCSQSYSNRANS TNAREELSK
Sequences:
>Translated_169_residues MAIEYADHDTSAPAAHSRPAMWVRWPLARSLARLLAGVVLHGVQCHQCHAHHAQHAQHAQHAGRRQTAQLHRACGARADH GDHDRQQPDDQCSRRTARPLHGAAKQQVINQIAHQAQAHQRPPFSATQAGTGLSRAWRQYQRRYRAVRTCSQSYSNRANS TNAREELSK >Mature_168_residues AIEYADHDTSAPAAHSRPAMWVRWPLARSLARLLAGVVLHGVQCHQCHAHHAQHAQHAQHAGRRQTAQLHRACGARADHG DHDRQQPDDQCSRRTARPLHGAAKQQVINQIAHQAQAHQRPPFSATQAGTGLSRAWRQYQRRYRAVRTCSQSYSNRANST NAREELSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18984; Mature: 18853
Theoretical pI: Translated: 11.41; Mature: 11.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIEYADHDTSAPAAHSRPAMWVRWPLARSLARLLAGVVLHGVQCHQCHAHHAQHAQHAQ CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH HAGRRQTAQLHRACGARADHGDHDRQQPDDQCSRRTARPLHGAAKQQVINQIAHQAQAHQ HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC RPPFSATQAGTGLSRAWRQYQRRYRAVRTCSQSYSNRANSTNAREELSK CCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCC >Mature Secondary Structure AIEYADHDTSAPAAHSRPAMWVRWPLARSLARLLAGVVLHGVQCHQCHAHHAQHAQHAQ CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH HAGRRQTAQLHRACGARADHGDHDRQQPDDQCSRRTARPLHGAAKQQVINQIAHQAQAHQ HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC RPPFSATQAGTGLSRAWRQYQRRYRAVRTCSQSYSNRANSTNAREELSK CCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA