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The map label for this gene is IS1086 [H]

Identifier: 84625163

GI number: 84625163

Start: 3969913

End: 3970455

Strand: Reverse

Name: IS1086 [H]

Synonym: XOO_3506

Alternate gene names: 84625163

Gene position: 3970455-3969913 (Counterclockwise)

Preceding gene: 84625164

Following gene: 84625161

Centisome position: 80.37

GC content: 58.01

Gene sequence:

>543_bases
GTGCCGGAGGAGTTGCGGATTGTGCATCGCCCCGAAGAAGTGCAGACGCGCTTGGTCCCAGGTCATTGGGAAGGCGACTT
GATCAAGGGCGCATTCAATCGTTCTTGCGTGGGCACGTTGGTGGAACGCAAGACGCGCTTTGTCGTGCTGTGCCGCATGG
ATGGCTGCACGGCCGCAGATGCGCTGGAAGGGTTTACCCGGCAAATGAAGAAACTGCCGGCCTCAATGCGGACAAGTCTG
ACCTACGATCGCGGTACCGAGCTCACGTGCTACGCCGAGCTGATGCAAGGATCGAACATCGACGTGTGGTTCGCTGATCC
ACATGCGCGGTGGCAGCGGGGAAGTAACGAGAACACCAACGGCCTGCTGCGCCAATTCCTGCCCAAGGGCGCCGACCTGT
CCACTGTCAGCCAAGAGTATCTCAATCACATCGCACTGCTGATGAATACCCGCCCTCGTCAGACGCTCGGATGGAAGACA
CCAAGCGAGGCAATGGAGGAAGAAATCGCAGCACTCAAATCACGTGTTGCACTTGAATCTTGA

Upstream 100 bases:

>100_bases
CGCATCCGCGTGGGGGCTGAAGAAGGAACTGGTCCAGGCCCTGCGTCAGCACAAGCCCAAACGCGGATGACGGCGTACAA
CGGCGGCCACACGCAGCTGG

Downstream 100 bases:

>100_bases
GACTGCCAGGCGACACCCACCATCAAGCGTTCACGCATCGTGCTGTTCCTCAGGGCGTGCGTCGCAGCGTGCCGTGCGGC
AGCCGGTTGATCAAGGCGAG

Product: ISXoo15 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MPEELRIVHRPEEVQTRLVPGHWEGDLIKGAFNRSCVGTLVERKTRFVVLCRMDGCTAADALEGFTRQMKKLPASMRTSL
TYDRGTELTCYAELMQGSNIDVWFADPHARWQRGSNENTNGLLRQFLPKGADLSTVSQEYLNHIALLMNTRPRQTLGWKT
PSEAMEEEIAALKSRVALES

Sequences:

>Translated_180_residues
MPEELRIVHRPEEVQTRLVPGHWEGDLIKGAFNRSCVGTLVERKTRFVVLCRMDGCTAADALEGFTRQMKKLPASMRTSL
TYDRGTELTCYAELMQGSNIDVWFADPHARWQRGSNENTNGLLRQFLPKGADLSTVSQEYLNHIALLMNTRPRQTLGWKT
PSEAMEEEIAALKSRVALES
>Mature_179_residues
PEELRIVHRPEEVQTRLVPGHWEGDLIKGAFNRSCVGTLVERKTRFVVLCRMDGCTAADALEGFTRQMKKLPASMRTSLT
YDRGTELTCYAELMQGSNIDVWFADPHARWQRGSNENTNGLLRQFLPKGADLSTVSQEYLNHIALLMNTRPRQTLGWKTP
SEAMEEEIAALKSRVALES

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG2826

COG function: function code L; Transposase and inactivated derivatives, IS30 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1786450, Length=164, Percent_Identity=42.0731707317073, Blast_Score=147, Evalue=4e-37,
Organism=Escherichia coli, GI1790736, Length=164, Percent_Identity=42.0731707317073, Blast_Score=147, Evalue=5e-37,
Organism=Escherichia coli, GI1787671, Length=164, Percent_Identity=42.0731707317073, Blast_Score=147, Evalue=5e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR001598 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 20395; Mature: 20263

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: PS50994 INTEGRASE ; PS01043 TRANSPOSASE_IS30

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEELRIVHRPEEVQTRLVPGHWEGDLIKGAFNRSCVGTLVERKTRFVVLCRMDGCTAAD
CCCCCEEEECCHHHHHEECCCCCCCCHHHHHCCHHHHHHHHHCCCEEEEEEECCCCCHHH
ALEGFTRQMKKLPASMRTSLTYDRGTELTCYAELMQGSNIDVWFADPHARWQRGSNENTN
HHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEECCCHHHHHCCCCCCHH
GLLRQFLPKGADLSTVSQEYLNHIALLMNTRPRQTLGWKTPSEAMEEEIAALKSRVALES
HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PEELRIVHRPEEVQTRLVPGHWEGDLIKGAFNRSCVGTLVERKTRFVVLCRMDGCTAAD
CCCCEEEECCHHHHHEECCCCCCCCHHHHHCCHHHHHHHHHCCCEEEEEEECCCCCHHH
ALEGFTRQMKKLPASMRTSLTYDRGTELTCYAELMQGSNIDVWFADPHARWQRGSNENTN
HHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEECCCHHHHHCCCCCCHH
GLLRQFLPKGADLSTVSQEYLNHIALLMNTRPRQTLGWKTPSEAMEEEIAALKSRVALES
HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1334071 [H]