| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is ilvE [H]
Identifier: 84625082
GI number: 84625082
Start: 3884973
End: 3886058
Strand: Reverse
Name: ilvE [H]
Synonym: XOO_3425
Alternate gene names: 84625082
Gene position: 3886058-3884973 (Counterclockwise)
Preceding gene: 84625083
Following gene: 84625081
Centisome position: 78.66
GC content: 65.47
Gene sequence:
>1086_bases GTGTCCGTGTCCTTCGCTTCCACCCGTTCTCCGTCGCCGCGCAGCGCCGACGAATTGTCCGTGATCCTGGCCGCGCCCGG TTTCGGGCTGCATTTCACCGACCACATGGTCGCCATCTCCTGGAACAACGAGCAGGGTTGGCATGACGCGCAGGTGCGCG CCTACGGCCCGCTGCAGCTGGATCCGGCGGCGTCGGTGTTGCATTACGGCCAGGAGATCTTCGAAGGCATCAAGGCCTAT CGGCATGCCGACGGCTCGATCTGGACCTTCCGTCCGCAGGCCAATGGCGAGCGCTTGCAGCGCTCGGCACGCCGTCTGGC ACTGCCGGAATTGCCGGTGGATCTGTTCGTCGAATCGCTGCGTCAGTTGGTCGCCGTGGACGGCAATTGGGTACCGTCGG CGCCGGAAACCAGCCTGTATTTCCGCCCGTTCATGATTGCCGATGAGGCCTTTCTGGGGGTGCGTGCGGCGCACAAGGCG TCGTACTACGTGATCGCCAGCCCGGCGGGCCCGTACTTCGCCAACGGCGTGGCGCCGGTGTCGATCTGGCTGTCCACCGA GTATGCACGTGCGGCCAAGGGCGGTACCGGTGCGGCCAAGTGCGGCGGCAATTACGCCGCCTCGTTGCTGCCGCAGCAGA AGGCCTACGCGCAGGGCTGCTCGCAGGTGCTGTTCCTGGACCCGGTGGAAGGCAAATACATCGAGGAACTGGGCGGCATG AACGTGTTCCTGGTCTACAGGGACGGCACGTTGGTGACCCCGGAACTGTCCGGCAGCATCCTTGAAGGCATCACCCGCGA CAGCATCCTGCAACTTGCCCGCGACCGCGGCATGCAGGTGATCGAGCGCAAGGTCGCCATCGACGAGTGGAAGCAGGGCG TGGCGTCGGGCGAAATCACCGAGGTGTTCGCCTGCGGCACGGCGGCGGTGGTGACCCCGATCGGCGAGTTGAAGGGCGAT GGCTTTGCGGTAGGCGATCTGTCCGTGCCGGCTGGCGAGGTGACCATGTCGCTGCGTCAGGAACTGACCGACATCCAGTA CGGGCGCGTGCCGGACCGTCATGGCTGGCTGGTGCGTTTGTCGTAA
Upstream 100 bases:
>100_bases TCCGAAGCGGCCCGTCTCGAGACTGGCATGCTCTGATCGTCACGCGCCATGTCCACGATGTGGCGCCGCGTCCTTTCGCC CGCCATACAGGAATCCCCCG
Downstream 100 bases:
>100_bases GTCGATATATTTCGTCAAACAAGCGCCTCCGTGTGTCAGCACGGGGGCTTTTTTGTTTGCGGAACAGCAGAAAATACGTT TTTCGACCGGGAACCCGTCG
Product: branched-chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT [H]
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MSVSFASTRSPSPRSADELSVILAAPGFGLHFTDHMVAISWNNEQGWHDAQVRAYGPLQLDPAASVLHYGQEIFEGIKAY RHADGSIWTFRPQANGERLQRSARRLALPELPVDLFVESLRQLVAVDGNWVPSAPETSLYFRPFMIADEAFLGVRAAHKA SYYVIASPAGPYFANGVAPVSIWLSTEYARAAKGGTGAAKCGGNYAASLLPQQKAYAQGCSQVLFLDPVEGKYIEELGGM NVFLVYRDGTLVTPELSGSILEGITRDSILQLARDRGMQVIERKVAIDEWKQGVASGEITEVFACGTAAVVTPIGELKGD GFAVGDLSVPAGEVTMSLRQELTDIQYGRVPDRHGWLVRLS
Sequences:
>Translated_361_residues MSVSFASTRSPSPRSADELSVILAAPGFGLHFTDHMVAISWNNEQGWHDAQVRAYGPLQLDPAASVLHYGQEIFEGIKAY RHADGSIWTFRPQANGERLQRSARRLALPELPVDLFVESLRQLVAVDGNWVPSAPETSLYFRPFMIADEAFLGVRAAHKA SYYVIASPAGPYFANGVAPVSIWLSTEYARAAKGGTGAAKCGGNYAASLLPQQKAYAQGCSQVLFLDPVEGKYIEELGGM NVFLVYRDGTLVTPELSGSILEGITRDSILQLARDRGMQVIERKVAIDEWKQGVASGEITEVFACGTAAVVTPIGELKGD GFAVGDLSVPAGEVTMSLRQELTDIQYGRVPDRHGWLVRLS >Mature_360_residues SVSFASTRSPSPRSADELSVILAAPGFGLHFTDHMVAISWNNEQGWHDAQVRAYGPLQLDPAASVLHYGQEIFEGIKAYR HADGSIWTFRPQANGERLQRSARRLALPELPVDLFVESLRQLVAVDGNWVPSAPETSLYFRPFMIADEAFLGVRAAHKAS YYVIASPAGPYFANGVAPVSIWLSTEYARAAKGGTGAAKCGGNYAASLLPQQKAYAQGCSQVLFLDPVEGKYIEELGGMN VFLVYRDGTLVTPELSGSILEGITRDSILQLARDRGMQVIERKVAIDEWKQGVASGEITEVFACGTAAVVTPIGELKGDG FAVGDLSVPAGEVTMSLRQELTDIQYGRVPDRHGWLVRLS
Specific function: Catalyzes the reversible transfers of an amino group from glutamate to the alpha-ketoacid of the respective amino acid in the final step in the biosynthesis of branchedchain amino acids. The amino acids can be ranked in the following order with respect to
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI296010904, Length=341, Percent_Identity=41.6422287390029, Blast_Score=253, Evalue=3e-67, Organism=Homo sapiens, GI296010906, Length=341, Percent_Identity=41.6422287390029, Blast_Score=252, Evalue=3e-67, Organism=Homo sapiens, GI38176287, Length=341, Percent_Identity=41.6422287390029, Blast_Score=252, Evalue=3e-67, Organism=Homo sapiens, GI50658084, Length=331, Percent_Identity=39.5770392749245, Blast_Score=233, Evalue=2e-61, Organism=Homo sapiens, GI296010902, Length=341, Percent_Identity=36.6568914956012, Blast_Score=203, Evalue=2e-52, Organism=Homo sapiens, GI296010900, Length=341, Percent_Identity=36.6568914956012, Blast_Score=202, Evalue=4e-52, Organism=Homo sapiens, GI258614015, Length=287, Percent_Identity=39.0243902439024, Blast_Score=192, Evalue=3e-49, Organism=Escherichia coli, GI48994963, Length=320, Percent_Identity=32.1875, Blast_Score=122, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17568601, Length=343, Percent_Identity=37.9008746355685, Blast_Score=242, Evalue=2e-64, Organism=Caenorhabditis elegans, GI17565728, Length=343, Percent_Identity=35.5685131195335, Blast_Score=195, Evalue=4e-50, Organism=Saccharomyces cerevisiae, GI6322002, Length=362, Percent_Identity=41.9889502762431, Blast_Score=245, Evalue=1e-65, Organism=Saccharomyces cerevisiae, GI6322608, Length=342, Percent_Identity=40.9356725146199, Blast_Score=231, Evalue=1e-61, Organism=Drosophila melanogaster, GI24641779, Length=367, Percent_Identity=40.3269754768392, Blast_Score=232, Evalue=2e-61,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005786 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 39119; Mature: 38988
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: PS00770 AA_TRANSFER_CLASS_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSFASTRSPSPRSADELSVILAAPGFGLHFTDHMVAISWNNEQGWHDAQVRAYGPLQL CCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCEEEEEEECCCCCCCCCEEEEECCEEE DPAASVLHYGQEIFEGIKAYRHADGSIWTFRPQANGERLQRSARRLALPELPVDLFVESL CHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHH RQLVAVDGNWVPSAPETSLYFRPFMIADEAFLGVRAAHKASYYVIASPAGPYFANGVAPV HHHHCCCCCCCCCCCCCCEEEEEEEEECHHHHHHHHHCCCCEEEEECCCCCHHHCCCCEE SIWLSTEYARAAKGGTGAAKCGGNYAASLLPQQKAYAQGCSQVLFLDPVEGKYIEELGGM EEEEECHHHHHHCCCCCCHHCCCCHHHHHCCHHHHHHHCCCEEEEECCCCCHHHHHHCCC NVFLVYRDGTLVTPELSGSILEGITRDSILQLARDRGMQVIERKVAIDEWKQGVASGEIT EEEEEEECCEEECCCCCCHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHH EVFACGTAAVVTPIGELKGDGFAVGDLSVPAGEVTMSLRQELTDIQYGRVPDRHGWLVRL EEEECCCHHEECCHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE S C >Mature Secondary Structure SVSFASTRSPSPRSADELSVILAAPGFGLHFTDHMVAISWNNEQGWHDAQVRAYGPLQL CCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCEEEEEEECCCCCCCCCEEEEECCEEE DPAASVLHYGQEIFEGIKAYRHADGSIWTFRPQANGERLQRSARRLALPELPVDLFVESL CHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHH RQLVAVDGNWVPSAPETSLYFRPFMIADEAFLGVRAAHKASYYVIASPAGPYFANGVAPV HHHHCCCCCCCCCCCCCCEEEEEEEEECHHHHHHHHHCCCCEEEEECCCCCHHHCCCCEE SIWLSTEYARAAKGGTGAAKCGGNYAASLLPQQKAYAQGCSQVLFLDPVEGKYIEELGGM EEEEECHHHHHHCCCCCCHHCCCCHHHHHCCHHHHHHHCCCEEEEECCCCCHHHHHHCCC NVFLVYRDGTLVTPELSGSILEGITRDSILQLARDRGMQVIERKVAIDEWKQGVASGEIT EEEEEEECCEEECCCCCCHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHH EVFACGTAAVVTPIGELKGDGFAVGDLSVPAGEVTMSLRQELTDIQYGRVPDRHGWLVRL EEEECCCHHEECCHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE S C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA