| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is cwlK [H]
Identifier: 84624979
GI number: 84624979
Start: 3786874
End: 3787752
Strand: Reverse
Name: cwlK [H]
Synonym: XOO_3322
Alternate gene names: 84624979
Gene position: 3787752-3786874 (Counterclockwise)
Preceding gene: 84624982
Following gene: 84624978
Centisome position: 76.67
GC content: 69.17
Gene sequence:
>879_bases GTGGCAGTCGTCGTTGCGGGCGTGGTGATCTTCCTGCTGGTGGTGTCTATCGCCTGCTGGCTGCTGTTGTTTCCGGAGGC GCTGGAGCGGGTGCAGGCCTGGTTAGGCGAGCGCCTGCGCGGCCTTCGGCAAGGCGCCGGGCGGGTCGGCCAGCGCGTGG GCCGCAGCGCTGGCGGAGTCGGCGAGGGGGTGCGCGGCGGGATCGGCGGGGTGACGGATTTCTTTCGGCGCCATCGCTGG GTCATCCTGTGCGCGACGCTGCTCTTGCTGTTGCCGCCGAGCGTGATCCTGCTGGTCCGGCAGAACGTGGTGCTGGAGGA TTTCCGTGCCGACGACATGAATGAATCCAGCAGCATGGTGGCGCAACTGCTGCGCGGCGAACGCTTGGTGCCGCCGCTGG CGCCGCCGCCGGAGGTATTCACCACCGAGGAGATCCGCCGCACCCGCCCGGAGATCGTCACCGCGGACCGGCGCTGGGAA AGCATCGACGCCGACCTGCAACAGCGCGTGCTCGCGATCTACGAGGTCATGCGTCGCCAGTACGGCTACGAAATGGTGCT AGTGGAGGGCTATCGCAGCCCGGAGCGCCAGGCCGAGTTGATGGGCGGCGGCCGTGCCACCCGCGCCGGCTCTTGGCAGA GCTGCCACCAGTATGGCCTGGCGGTGGACAGCGCGCCGCTGCGCGACGGCAAGCTGCAGTGGGACATGGGCGATCCGTGG ACCAGACGCGCCTACTTCCTCTACGGCGAGCTTGCGCAGCAGGCCGGGCTGGAGTGGGGCGGCAGCTGGCGCAGTATCAA GGACTACGTGCATCTGGAGAAGCTGGACGCCTGCCGCAGCGCCCGCGCCGCCAAGCGCGCTGAATTGGCCCAAGGGTGA
Upstream 100 bases:
>100_bases CCTTGTTCGGCGAGCGCCGGGGATTTGTCTATCTTCATTCTAGTGCTTGGCGCCGGCCCGTCAACCGCACAGGAATCATC AGCATAATCAGGAGGATGTA
Downstream 100 bases:
>100_bases GCCGTGGCTGAACTCCTGCTATCTTCTCCTGCGTGGCGGCGATCGCGTCCCACGGGGGGGATGGCGGCGACGGACCGGCC CCGGCACAAAGACCATGGAG
Product: putative transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MAVVVAGVVIFLLVVSIACWLLLFPEALERVQAWLGERLRGLRQGAGRVGQRVGRSAGGVGEGVRGGIGGVTDFFRRHRW VILCATLLLLLPPSVILLVRQNVVLEDFRADDMNESSSMVAQLLRGERLVPPLAPPPEVFTTEEIRRTRPEIVTADRRWE SIDADLQQRVLAIYEVMRRQYGYEMVLVEGYRSPERQAELMGGGRATRAGSWQSCHQYGLAVDSAPLRDGKLQWDMGDPW TRRAYFLYGELAQQAGLEWGGSWRSIKDYVHLEKLDACRSARAAKRAELAQG
Sequences:
>Translated_292_residues MAVVVAGVVIFLLVVSIACWLLLFPEALERVQAWLGERLRGLRQGAGRVGQRVGRSAGGVGEGVRGGIGGVTDFFRRHRW VILCATLLLLLPPSVILLVRQNVVLEDFRADDMNESSSMVAQLLRGERLVPPLAPPPEVFTTEEIRRTRPEIVTADRRWE SIDADLQQRVLAIYEVMRRQYGYEMVLVEGYRSPERQAELMGGGRATRAGSWQSCHQYGLAVDSAPLRDGKLQWDMGDPW TRRAYFLYGELAQQAGLEWGGSWRSIKDYVHLEKLDACRSARAAKRAELAQG >Mature_291_residues AVVVAGVVIFLLVVSIACWLLLFPEALERVQAWLGERLRGLRQGAGRVGQRVGRSAGGVGEGVRGGIGGVTDFFRRHRWV ILCATLLLLLPPSVILLVRQNVVLEDFRADDMNESSSMVAQLLRGERLVPPLAPPPEVFTTEEIRRTRPEIVTADRRWES IDADLQQRVLAIYEVMRRQYGYEMVLVEGYRSPERQAELMGGGRATRAGSWQSCHQYGLAVDSAPLRDGKLQWDMGDPWT RRAYFLYGELAQQAGLEWGGSWRSIKDYVHLEKLDACRSARAAKRAELAQG
Specific function: Cleaves the linkage of the L-alanine-D-glutamic acid of B.subtilis cell wall [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M15C family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009045 - InterPro: IPR012340 - InterPro: IPR003709 [H]
Pfam domain/function: PF02557 VanY [H]
EC number: NA
Molecular weight: Translated: 32716; Mature: 32585
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVVVAGVVIFLLVVSIACWLLLFPEALERVQAWLGERLRGLRQGAGRVGQRVGRSAGGV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GEGVRGGIGGVTDFFRRHRWVILCATLLLLLPPSVILLVRQNVVLEDFRADDMNESSSMV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCHHHHH AQLLRGERLVPPLAPPPEVFTTEEIRRTRPEIVTADRRWESIDADLQQRVLAIYEVMRRQ HHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHH YGYEMVLVEGYRSPERQAELMGGGRATRAGSWQSCHQYGLAVDSAPLRDGKLQWDMGDPW CCCEEEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEECCCCCH TRRAYFLYGELAQQAGLEWGGSWRSIKDYVHLEKLDACRSARAAKRAELAQG HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AVVVAGVVIFLLVVSIACWLLLFPEALERVQAWLGERLRGLRQGAGRVGQRVGRSAGGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GEGVRGGIGGVTDFFRRHRWVILCATLLLLLPPSVILLVRQNVVLEDFRADDMNESSSMV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCHHHHH AQLLRGERLVPPLAPPPEVFTTEEIRRTRPEIVTADRRWESIDADLQQRVLAIYEVMRRQ HHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHH YGYEMVLVEGYRSPERQAELMGGGRATRAGSWQSCHQYGLAVDSAPLRDGKLQWDMGDPW CCCEEEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEECCCCCH TRRAYFLYGELAQQAGLEWGGSWRSIKDYVHLEKLDACRSARAAKRAELAQG HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274031; 9384377 [H]