| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84624965
Identifier: 84624965
GI number: 84624965
Start: 3769562
End: 3770884
Strand: Reverse
Name: 84624965
Synonym: XOO_3308
Alternate gene names: NA
Gene position: 3770884-3769562 (Counterclockwise)
Preceding gene: 84624966
Following gene: 84624964
Centisome position: 76.33
GC content: 61.15
Gene sequence:
>1323_bases ATGAGCCAGCTCTCGCTCGCAGAGGGCTTCAGGCGCCGCACCTACCTCGAAATCTATGGGCGCAAGCTGGAACAGCTGGT CAAGACCCATCAGCGTAAAATCAAGTCGCTCAATATCGCCGTCTTCGGCTTTTCGCGTGGTGCGGCCGCTGCGCGGGCCT TCGTGCATTGGTTGTATGAGGTGGTGCAACCCTGGGGCAGCGGCTGCGGCTACAACCTGGCCGGCGTGCCGATGCAGCTG ACGTTCCTGGGGATTTTCGATACCGTGGCGTCGGTGGGCATGGCGGCGATGTCGCGCGTCAGCGAGGGCAAGATGGCCTG GGCGCATGGCGAGATGATGAGCATCCATCCTGAGGTCAAACAGTGCGTGCACTTCGCCGCGCTGCACGAGCAGCGCATCA ATTTTCCGGCGGATCTGGCGGCATCCGGCAAGGAAGCGTTGTATCCGGGCATGCATTCTGATGTGGGTGGCGGCTACAGC CCGGGTGGACAGGGCAAGGATTGCGTCGATGCGCAGGCGCTTGGCGCCGCCAAGCTGTCCCAGATTCCGCTGATCGACAT GCACCACGAAGCCATCAAGGCCGGCGTGCCGCTGATGACGATGGAGGAAATCCGTCAACGTCCCGCACTTGCCAAATACT TCGCCTGCCATCCGCAACTGATCGATGCCTACAACGGTTGGCTGGCCGGACACGCGATAGCCGGGGGAGATCATATGCAG CAGATCAGGCAGCACTGTCGCCAGTATGTGCGGTGGAAAGGCATGCGCCTGTGGGAGGGTCCAGACAGCCTGTTGCAACA GCCGTTTTACGTGCGCGCCGATGCTGAGGACAAAGTGGACTTGGCCAAAGCGCAGCATGCCTTCGGCCAACTGGTCGCCG ATATGAGCCGGCAAAACGATGCGGTCGATGGGTATCAACAGGCGTTTGCCGATTACAAGGCAAGAGACCAGGCGTGGCAA ACCAGCCGTCAGGGACCGCGCCCGGTGCCTCCAAGGCGCATCGTCTCCGCGGATCTGGCGGACGCCGGTACCAAGGAACT GCTCGATGTCGTGCTGAGCAAGAAGCCCGTTCCACCTGTGGTTGCGAACCTGTTCGACAACTATGTCCACGACTCGCTGG CGGGGTTCTACATCAAGCGGTGGACCGAATTGGATATTCCGGTGGCCGCTACCAATGGCTATCTCCGTTACCGCTCAGTC TTCAAGCTCACCAGCAGTTGGCAGCAGCGCGAATGCGTCGACACGCTGACCACTCCCATGCCGCCCGCAAACGTTCCCAG TATCGACCAGGCGTTCGGGATGATGGGAAACGCGATGCGGTAG
Upstream 100 bases:
>100_bases TTGGGCGATCATCCAGGTCTATAACTCAATTCATCGTTATTTAGATATCAACCACGCACCATTAATTCCAGACGACAGCG CAAGATTAATCGTCAGTCAA
Downstream 100 bases:
>100_bases ACCGCGTGCCATGGATGACTGTGCCAGCGGCACAGCCAAGCAATCAGCGCAGGCAACCGCCCGCCTGCACACTAGGCAGG CGTGCTGGCCGCGGCGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 440; Mature: 439
Protein sequence:
>440_residues MSQLSLAEGFRRRTYLEIYGRKLEQLVKTHQRKIKSLNIAVFGFSRGAAAARAFVHWLYEVVQPWGSGCGYNLAGVPMQL TFLGIFDTVASVGMAAMSRVSEGKMAWAHGEMMSIHPEVKQCVHFAALHEQRINFPADLAASGKEALYPGMHSDVGGGYS PGGQGKDCVDAQALGAAKLSQIPLIDMHHEAIKAGVPLMTMEEIRQRPALAKYFACHPQLIDAYNGWLAGHAIAGGDHMQ QIRQHCRQYVRWKGMRLWEGPDSLLQQPFYVRADAEDKVDLAKAQHAFGQLVADMSRQNDAVDGYQQAFADYKARDQAWQ TSRQGPRPVPPRRIVSADLADAGTKELLDVVLSKKPVPPVVANLFDNYVHDSLAGFYIKRWTELDIPVAATNGYLRYRSV FKLTSSWQQRECVDTLTTPMPPANVPSIDQAFGMMGNAMR
Sequences:
>Translated_440_residues MSQLSLAEGFRRRTYLEIYGRKLEQLVKTHQRKIKSLNIAVFGFSRGAAAARAFVHWLYEVVQPWGSGCGYNLAGVPMQL TFLGIFDTVASVGMAAMSRVSEGKMAWAHGEMMSIHPEVKQCVHFAALHEQRINFPADLAASGKEALYPGMHSDVGGGYS PGGQGKDCVDAQALGAAKLSQIPLIDMHHEAIKAGVPLMTMEEIRQRPALAKYFACHPQLIDAYNGWLAGHAIAGGDHMQ QIRQHCRQYVRWKGMRLWEGPDSLLQQPFYVRADAEDKVDLAKAQHAFGQLVADMSRQNDAVDGYQQAFADYKARDQAWQ TSRQGPRPVPPRRIVSADLADAGTKELLDVVLSKKPVPPVVANLFDNYVHDSLAGFYIKRWTELDIPVAATNGYLRYRSV FKLTSSWQQRECVDTLTTPMPPANVPSIDQAFGMMGNAMR >Mature_439_residues SQLSLAEGFRRRTYLEIYGRKLEQLVKTHQRKIKSLNIAVFGFSRGAAAARAFVHWLYEVVQPWGSGCGYNLAGVPMQLT FLGIFDTVASVGMAAMSRVSEGKMAWAHGEMMSIHPEVKQCVHFAALHEQRINFPADLAASGKEALYPGMHSDVGGGYSP GGQGKDCVDAQALGAAKLSQIPLIDMHHEAIKAGVPLMTMEEIRQRPALAKYFACHPQLIDAYNGWLAGHAIAGGDHMQQ IRQHCRQYVRWKGMRLWEGPDSLLQQPFYVRADAEDKVDLAKAQHAFGQLVADMSRQNDAVDGYQQAFADYKARDQAWQT SRQGPRPVPPRRIVSADLADAGTKELLDVVLSKKPVPPVVANLFDNYVHDSLAGFYIKRWTELDIPVAATNGYLRYRSVF KLTSSWQQRECVDTLTTPMPPANVPSIDQAFGMMGNAMR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48834; Mature: 48702
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: PS50007 PIPLC_X_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQLSLAEGFRRRTYLEIYGRKLEQLVKTHQRKIKSLNIAVFGFSRGAAAARAFVHWLYE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHH VVQPWGSGCGYNLAGVPMQLTFLGIFDTVASVGMAAMSRVSEGKMAWAHGEMMSIHPEVK HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEECCHHHH QCVHFAALHEQRINFPADLAASGKEALYPGMHSDVGGGYSPGGQGKDCVDAQALGAAKLS HHHHHHHHHHHHCCCCHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHH QIPLIDMHHEAIKAGVPLMTMEEIRQRPALAKYFACHPQLIDAYNGWLAGHAIAGGDHMQ CCCEEHHHHHHHHCCCCCEEHHHHHHCCHHHHHHHCCHHHHHHHCCHHHCCCCCCCHHHH QIRQHCRQYVRWKGMRLWEGPDSLLQQPFYVRADAEDKVDLAKAQHAFGQLVADMSRQND HHHHHHHHHHHHCCCEEECCCHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC AVDGYQQAFADYKARDQAWQTSRQGPRPVPPRRIVSADLADAGTKELLDVVLSKKPVPPV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCHH VANLFDNYVHDSLAGFYIKRWTELDIPVAATNGYLRYRSVFKLTSSWQQRECVDTLTTPM HHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCC PPANVPSIDQAFGMMGNAMR CCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure SQLSLAEGFRRRTYLEIYGRKLEQLVKTHQRKIKSLNIAVFGFSRGAAAARAFVHWLYE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHH VVQPWGSGCGYNLAGVPMQLTFLGIFDTVASVGMAAMSRVSEGKMAWAHGEMMSIHPEVK HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEECCHHHH QCVHFAALHEQRINFPADLAASGKEALYPGMHSDVGGGYSPGGQGKDCVDAQALGAAKLS HHHHHHHHHHHHCCCCHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHH QIPLIDMHHEAIKAGVPLMTMEEIRQRPALAKYFACHPQLIDAYNGWLAGHAIAGGDHMQ CCCEEHHHHHHHHCCCCCEEHHHHHHCCHHHHHHHCCHHHHHHHCCHHHCCCCCCCHHHH QIRQHCRQYVRWKGMRLWEGPDSLLQQPFYVRADAEDKVDLAKAQHAFGQLVADMSRQND HHHHHHHHHHHHCCCEEECCCHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC AVDGYQQAFADYKARDQAWQTSRQGPRPVPPRRIVSADLADAGTKELLDVVLSKKPVPPV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCHH VANLFDNYVHDSLAGFYIKRWTELDIPVAATNGYLRYRSVFKLTSSWQQRECVDTLTTPM HHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCC PPANVPSIDQAFGMMGNAMR CCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA