| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84624959
Identifier: 84624959
GI number: 84624959
Start: 3760603
End: 3761199
Strand: Reverse
Name: 84624959
Synonym: XOO_3302
Alternate gene names: NA
Gene position: 3761199-3760603 (Counterclockwise)
Preceding gene: 84624960
Following gene: 84624958
Centisome position: 76.13
GC content: 60.97
Gene sequence:
>597_bases ATGCGTGACGCGATCGCGCACCGTGGCGTTGTCACTGACGTAACGCGCGGCTCGGTGCCGAGACGCCTGCTTGCCATCTG CGGCCTGATGCTGATGCTGGCAGGATGCGGCGCTGGCAATTCGTCCGCGCCGTCATCGGCACAGGCCCAGGAAACCGACA CGGTCGGCCTGAGCCTGTTCGGGCTGAACTATACCGATGTGCCGATCGGCATCTTTTATGTGAACGGCACTTGGGGTGGT GCGGTGACGCCTTATGCGGCTGGGCTGAAGACAGCAGGCAGCATCGGTCTACCAGACAAATGGCATCCAGGCATCAAGGT CAAGGTGCAGTGGCAGGACGACTTTCTTTACGATCAGGACAAGGATGCGCTGACGACGGCGGAAGTCGAGGTGCCCCGTT ACGGAAAGATCTACTCCGGCTACTTGCTGGTGGCGTTCCTGCCAGGCCGCAAGGTCAAGGTCTATGCGTCTGGTGTCGGA CCTGGGCACAAGGACGCGCCGGATGGTTTGGAGAATCCTGGCGAATTCTGTCAAAGGCAGCCGGGTTGCCCGCAGTGGTA TCGAAGCGACAAGCCGCCCAGGGAGGGTCATTACTGA
Upstream 100 bases:
>100_bases GGCCTGGCGGAGACGCCGCAGATATCTGCAAACGCATACCGCCAGGTGCTGGTGGCCCTGGAAGCCGAAGGGCTGCTCAG CGCTGCCGAGGCGACGCAGG
Downstream 100 bases:
>100_bases TGCAAGTTTCCTTCGCTCCACTGTGTCCTGAAAATCCGTTGCAGCTCAGTCGCGCGCAACAGGCTGAAATGATGAGCGCG GGGCTGGGCCGTCCTCAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MRDAIAHRGVVTDVTRGSVPRRLLAICGLMLMLAGCGAGNSSAPSSAQAQETDTVGLSLFGLNYTDVPIGIFYVNGTWGG AVTPYAAGLKTAGSIGLPDKWHPGIKVKVQWQDDFLYDQDKDALTTAEVEVPRYGKIYSGYLLVAFLPGRKVKVYASGVG PGHKDAPDGLENPGEFCQRQPGCPQWYRSDKPPREGHY
Sequences:
>Translated_198_residues MRDAIAHRGVVTDVTRGSVPRRLLAICGLMLMLAGCGAGNSSAPSSAQAQETDTVGLSLFGLNYTDVPIGIFYVNGTWGG AVTPYAAGLKTAGSIGLPDKWHPGIKVKVQWQDDFLYDQDKDALTTAEVEVPRYGKIYSGYLLVAFLPGRKVKVYASGVG PGHKDAPDGLENPGEFCQRQPGCPQWYRSDKPPREGHY >Mature_198_residues MRDAIAHRGVVTDVTRGSVPRRLLAICGLMLMLAGCGAGNSSAPSSAQAQETDTVGLSLFGLNYTDVPIGIFYVNGTWGG AVTPYAAGLKTAGSIGLPDKWHPGIKVKVQWQDDFLYDQDKDALTTAEVEVPRYGKIYSGYLLVAFLPGRKVKVYASGVG PGHKDAPDGLENPGEFCQRQPGCPQWYRSDKPPREGHY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21300; Mature: 21300
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDAIAHRGVVTDVTRGSVPRRLLAICGLMLMLAGCGAGNSSAPSSAQAQETDTVGLSLF CCCCHHHCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEE GLNYTDVPIGIFYVNGTWGGAVTPYAAGLKTAGSIGLPDKWHPGIKVKVQWQDDFLYDQD CCCCCCCEEEEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC KDALTTAEVEVPRYGKIYSGYLLVAFLPGRKVKVYASGVGPGHKDAPDGLENPGEFCQRQ CCCEEEEEEECCCCCCEECCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHCC PGCPQWYRSDKPPREGHY CCCCHHHCCCCCCCCCCC >Mature Secondary Structure MRDAIAHRGVVTDVTRGSVPRRLLAICGLMLMLAGCGAGNSSAPSSAQAQETDTVGLSLF CCCCHHHCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEE GLNYTDVPIGIFYVNGTWGGAVTPYAAGLKTAGSIGLPDKWHPGIKVKVQWQDDFLYDQD CCCCCCCEEEEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC KDALTTAEVEVPRYGKIYSGYLLVAFLPGRKVKVYASGVGPGHKDAPDGLENPGEFCQRQ CCCEEEEEEECCCCCCEECCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHCC PGCPQWYRSDKPPREGHY CCCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA