| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84624935
Identifier: 84624935
GI number: 84624935
Start: 3723230
End: 3725167
Strand: Reverse
Name: 84624935
Synonym: XOO_3278
Alternate gene names: NA
Gene position: 3725167-3723230 (Counterclockwise)
Preceding gene: 84624936
Following gene: 84624934
Centisome position: 75.4
GC content: 63.26
Gene sequence:
>1938_bases ATGCGATCCGCAAGGCGCAGGGCATCAAGACACCGCCCGATGCACCCAGCGATCTTGCATCGCAGTTCAAGGATTGGGGC AAGAAGTAACGTGGACGGGCCGCGCCGCATCACGGTCAAGCACGGCGCGGTCGAGGATGAAGTGCGTTGGCAGCGGGCCG CCTCGCGCACCGCCGAAGGCATCGCGAACATCGACGACGCCCAGGATCTTCCCGATGCGACCTCCTACCTGTGGACCACT ATGACGCAAGGATCGGATGTCGCCTTGCGTGAGCAGACCGCCCGGCGCGCGCAGCGCGAGCGCGCACGTGCCCAGGACGA TGCAAGGATCCGCGAGCAAGCCGACGCGAATGCCTCCGCACTGGGGCGGGAAGCGTGGAAGACATACACCAAGTACTTCG ATGAGCCGGCGCAGCGCCGCGTGGTCGATCAGGAGTATCCCCAGCAGCTGGAGCACTTCGGGCGCGAGGTGCTGGCCAGG CTGGACCCGCCCTACCTCGCCTGGCTCAAGAGTCCCTCGTTGACGACCTACCTGACCCACACCTTCGACGAGCACGATCT CGACAGCGGTGCCTCCTATACGGCCCTGGCGACCCAACTGCTGCACCATGCCAGCGGCCGTGGCGCGGTGTTCGACTACC TGTGCCAGAGCATCCAGCAGGCGCCGACCGCGCCCGAGGCCTGGGTGGCGCGGGCGTTGGCGCTCAATCACGCGCCGCTG ATCCAGGCGAGCTGGGAGGAGGCGGCCAGGAAGGGCAGCGAGCGCGAGCCATTCCTGCCGGAGTTCGTGGAGAAGTTCCA CGACAAGTTCAAGGATGTGCTGGTGGCCGGTGGCAAGGGGGAATTGAACCGGCCGATGGTGGATGCGGTGGCGCGCTTCA TGTACCAGCTGACCGGCCCGCTGGTGCGCGAGCTGGGGTCCGCGCTGGATCACGGCATGGCGTTTGCGGCCCTGCCGCTG CCGTCGAAATGGCAGCTGGGCTTGTTGGGCGCGGTGGCGCGCGCGGAGACGCCGACCCTGCGGATGGTGGATCTGCGCGG CACGCGCAGTTTCAGCGAAGCGACCAAGCTGCTGGCCAATCTGGTGTCCTCGCTGGGCGCCGGGCCGGCGGGCGCGGCGC GCGGCGCGGTGCGGCCGACGCTGCGGCCGGTGATGGACACGGCCGAGCGCTATCCGTTCCGGGCGGTGATGCTGGTAGAC GAGGCCAAGGTCGCGCAGCTGGAAGGCAGCGGCGGTGCGGCGCTGAAGGCCGGCATGGCCGAGGCGCTGAGCGCGCGGGA ATTCGATGACGTGATGCAGGAGTCGGTGGGCAAGCTGGCCAGCCTGGAAGTGAAGGTGGCGGTGGTGCAGGCGATCCTGT CGTCGATCACGCTGTATCTGTCGTACGGCAAACTGATGAAGGCCGAGGAGGACAAGGTGTGGAGCGAACGGATCAACGTG GCCGGCGGGGTGATCGGATTGGTGGGTGGATTGACCGAAGCCACCGGCACTGTGCTGGAGAAGACCCCCTGGGGCCAGAC CCGCCTGAGCTGGCAGTTCCGGTTCCAGGCGGTGGTGATCGAGAGCCGTGCGGGTTGGTTTACCGGCACCGGCAAGCTGA TGGGCGTGGTGGGCGGTGTGATTGGGGGGGTGTTGGCGATGATTGATGGTTTTAAGACGTTCAAAAAACATCCTGTAATT GGAACTTTGATTATGGCGCTAGGATTTATTTCTATCGCCGCAGCATTCTTGCTCCTCACCTCTGCTGCGGGAATTGGAAT AATAATTGGTTTGGTTGTTGCGGCAATTATGGCTGTAGTATATTTAATAAAGCCAAACGCGCTGCAGGATTTTTTAATCG ATACTCTTTACGGAAAAACAGATGTTGGAGCTGAGAAAAACGGTTTCAAGGGTTTGGCGCAGCAGCAGATTGCATTGGAA AGTATTGCTAAATCTTAA
Upstream 100 bases:
>100_bases GTGGAAGCCGAGTGCCAGGTCGAGCCGAACGACCCGCACATCTGGCCGATCCCCAACTCGATAGGCGAGTTCGTCACCAC CGTGCCGGGCTTGATGTCCT
Downstream 100 bases:
>100_bases GGAATTCCATGTTTACTGGATGGTCAAGGGCGTTTAAGATTAATAGGCCGTTGGATGAGGGGGAGAAATCTTCGTCTCTT CTGCGAGATCTGAAGGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 645; Mature: 645
Protein sequence:
>645_residues MRSARRRASRHRPMHPAILHRSSRIGARSNVDGPRRITVKHGAVEDEVRWQRAASRTAEGIANIDDAQDLPDATSYLWTT MTQGSDVALREQTARRAQRERARAQDDARIREQADANASALGREAWKTYTKYFDEPAQRRVVDQEYPQQLEHFGREVLAR LDPPYLAWLKSPSLTTYLTHTFDEHDLDSGASYTALATQLLHHASGRGAVFDYLCQSIQQAPTAPEAWVARALALNHAPL IQASWEEAARKGSEREPFLPEFVEKFHDKFKDVLVAGGKGELNRPMVDAVARFMYQLTGPLVRELGSALDHGMAFAALPL PSKWQLGLLGAVARAETPTLRMVDLRGTRSFSEATKLLANLVSSLGAGPAGAARGAVRPTLRPVMDTAERYPFRAVMLVD EAKVAQLEGSGGAALKAGMAEALSAREFDDVMQESVGKLASLEVKVAVVQAILSSITLYLSYGKLMKAEEDKVWSERINV AGGVIGLVGGLTEATGTVLEKTPWGQTRLSWQFRFQAVVIESRAGWFTGTGKLMGVVGGVIGGVLAMIDGFKTFKKHPVI GTLIMALGFISIAAAFLLLTSAAGIGIIIGLVVAAIMAVVYLIKPNALQDFLIDTLYGKTDVGAEKNGFKGLAQQQIALE SIAKS
Sequences:
>Translated_645_residues MRSARRRASRHRPMHPAILHRSSRIGARSNVDGPRRITVKHGAVEDEVRWQRAASRTAEGIANIDDAQDLPDATSYLWTT MTQGSDVALREQTARRAQRERARAQDDARIREQADANASALGREAWKTYTKYFDEPAQRRVVDQEYPQQLEHFGREVLAR LDPPYLAWLKSPSLTTYLTHTFDEHDLDSGASYTALATQLLHHASGRGAVFDYLCQSIQQAPTAPEAWVARALALNHAPL IQASWEEAARKGSEREPFLPEFVEKFHDKFKDVLVAGGKGELNRPMVDAVARFMYQLTGPLVRELGSALDHGMAFAALPL PSKWQLGLLGAVARAETPTLRMVDLRGTRSFSEATKLLANLVSSLGAGPAGAARGAVRPTLRPVMDTAERYPFRAVMLVD EAKVAQLEGSGGAALKAGMAEALSAREFDDVMQESVGKLASLEVKVAVVQAILSSITLYLSYGKLMKAEEDKVWSERINV AGGVIGLVGGLTEATGTVLEKTPWGQTRLSWQFRFQAVVIESRAGWFTGTGKLMGVVGGVIGGVLAMIDGFKTFKKHPVI GTLIMALGFISIAAAFLLLTSAAGIGIIIGLVVAAIMAVVYLIKPNALQDFLIDTLYGKTDVGAEKNGFKGLAQQQIALE SIAKS >Mature_645_residues MRSARRRASRHRPMHPAILHRSSRIGARSNVDGPRRITVKHGAVEDEVRWQRAASRTAEGIANIDDAQDLPDATSYLWTT MTQGSDVALREQTARRAQRERARAQDDARIREQADANASALGREAWKTYTKYFDEPAQRRVVDQEYPQQLEHFGREVLAR LDPPYLAWLKSPSLTTYLTHTFDEHDLDSGASYTALATQLLHHASGRGAVFDYLCQSIQQAPTAPEAWVARALALNHAPL IQASWEEAARKGSEREPFLPEFVEKFHDKFKDVLVAGGKGELNRPMVDAVARFMYQLTGPLVRELGSALDHGMAFAALPL PSKWQLGLLGAVARAETPTLRMVDLRGTRSFSEATKLLANLVSSLGAGPAGAARGAVRPTLRPVMDTAERYPFRAVMLVD EAKVAQLEGSGGAALKAGMAEALSAREFDDVMQESVGKLASLEVKVAVVQAILSSITLYLSYGKLMKAEEDKVWSERINV AGGVIGLVGGLTEATGTVLEKTPWGQTRLSWQFRFQAVVIESRAGWFTGTGKLMGVVGGVIGGVLAMIDGFKTFKKHPVI GTLIMALGFISIAAAFLLLTSAAGIGIIIGLVVAAIMAVVYLIKPNALQDFLIDTLYGKTDVGAEKNGFKGLAQQQIALE SIAKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70080; Mature: 70080
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSARRRASRHRPMHPAILHRSSRIGARSNVDGPRRITVKHGAVEDEVRWQRAASRTAEG CCCHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH IANIDDAQDLPDATSYLWTTMTQGSDVALREQTARRAQRERARAQDDARIREQADANASA CCCCCCHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHH LGREAWKTYTKYFDEPAQRRVVDQEYPQQLEHFGREVLARLDPPYLAWLKSPSLTTYLTH HHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEHHHH TFDEHDLDSGASYTALATQLLHHASGRGAVFDYLCQSIQQAPTAPEAWVARALALNHAPL CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC IQASWEEAARKGSEREPFLPEFVEKFHDKFKDVLVAGGKGELNRPMVDAVARFMYQLTGP HHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHH LVRELGSALDHGMAFAALPLPSKWQLGLLGAVARAETPTLRMVDLRGTRSFSEATKLLAN HHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHH LVSSLGAGPAGAARGAVRPTLRPVMDTAERYPFRAVMLVDEAKVAQLEGSGGAALKAGMA HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHEECCCCCHHHHHHHH EALSAREFDDVMQESVGKLASLEVKVAVVQAILSSITLYLSYGKLMKAEEDKVWSERINV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGGVIGLVGGLTEATGTVLEKTPWGQTRLSWQFRFQAVVIESRAGWFTGTGKLMGVVGGV HHHHHHHHHHHHHHHCHHHCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCHHHHHHHHHH IGGVLAMIDGFKTFKKHPVIGTLIMALGFISIAAAFLLLTSAAGIGIIIGLVVAAIMAVV HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH YLIKPNALQDFLIDTLYGKTDVGAEKNGFKGLAQQQIALESIAKS HHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MRSARRRASRHRPMHPAILHRSSRIGARSNVDGPRRITVKHGAVEDEVRWQRAASRTAEG CCCHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH IANIDDAQDLPDATSYLWTTMTQGSDVALREQTARRAQRERARAQDDARIREQADANASA CCCCCCHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHH LGREAWKTYTKYFDEPAQRRVVDQEYPQQLEHFGREVLARLDPPYLAWLKSPSLTTYLTH HHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEHHHH TFDEHDLDSGASYTALATQLLHHASGRGAVFDYLCQSIQQAPTAPEAWVARALALNHAPL CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC IQASWEEAARKGSEREPFLPEFVEKFHDKFKDVLVAGGKGELNRPMVDAVARFMYQLTGP HHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHH LVRELGSALDHGMAFAALPLPSKWQLGLLGAVARAETPTLRMVDLRGTRSFSEATKLLAN HHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHH LVSSLGAGPAGAARGAVRPTLRPVMDTAERYPFRAVMLVDEAKVAQLEGSGGAALKAGMA HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHEECCCCCHHHHHHHH EALSAREFDDVMQESVGKLASLEVKVAVVQAILSSITLYLSYGKLMKAEEDKVWSERINV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGGVIGLVGGLTEATGTVLEKTPWGQTRLSWQFRFQAVVIESRAGWFTGTGKLMGVVGGV HHHHHHHHHHHHHHHCHHHCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCHHHHHHHHHH IGGVLAMIDGFKTFKKHPVIGTLIMALGFISIAAAFLLLTSAAGIGIIIGLVVAAIMAVV HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH YLIKPNALQDFLIDTLYGKTDVGAEKNGFKGLAQQQIALESIAKS HHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA