| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84624933
Identifier: 84624933
GI number: 84624933
Start: 3719840
End: 3722278
Strand: Reverse
Name: 84624933
Synonym: XOO_3276
Alternate gene names: NA
Gene position: 3722278-3719840 (Counterclockwise)
Preceding gene: 84624934
Following gene: 84624931
Centisome position: 75.35
GC content: 66.22
Gene sequence:
>2439_bases ATGCGATGCGCAAGGCGCAGGGCATCAAGACACCGCCCGATGCACCCAGCGATCTTGCATCGCAGTTCAAGGATTGGGGC AAGAAGTAACGTGGACGGGCCGCGCTGCATCACGGTCAAGGATGCGGCACGCGCCACCAAGGTATGGCTGGGGTTCTCGG ATGTGACGTGGAAAGCGGCCGTGCTGCAGAAGCACGCCGATGCCGCCTACCGACAAGCGCATATGCGCTGCCTGGACATC GCCCAATGGCGCGCTGGCGGGCAGCTGCAACATGCCAGCGACTTTGCCGAGCTTGCCAGCCGCGTGGCCGAGTACGCGAC CACGCCAGAGCAGCTGCTTGCCCAGACCCGGGCCTATGTCAAAACGCTGCTGCCGGTGCCGCTCAAGACCGTCGGCGAGC TGCGCGGTGCCGATGCCTTGGCAACGCGCGCCCGCGAGTCGAGTTCACGGCTGCTGCAGCAACTGCTGCCGGTGGCGGCC GGCGGCGTTGCCGCCCACAAGGGCCGGGTGACCTCGGCAACCTGGGCGTTCTCCACCCAACCGTTCTTCGCCGACGGCAA CGATGCCGCCGCCATGCTGACCTGGGCTGCGCAGACAGCCGCACCGTTGCGGCCGGCCTTGGTCGCGTTGGACGATCCGG CCGGGGTGGCCATGGAGCTCAACGGCCTGGCCCTGCAGCGCAGCATGGAGTTCAGCGAGAACCCGCAGCGCAAGTGGAAG CATGAAACGGCGGTGTTGATCGATGCGCTGCAGGAGGCGGTCAAGCACGGCGCGGTCGAGGATGAAGTGCATGCGCAGAT CGCCGCCTCGCGCACCGCCGAAGGCATCGCGAACATCGACGACGCCCAGGATCTTCCCGATGCGACCTCCTACCTGTGGA CCACTATGACGCAAGGATCGGATGTCGCCTTGCGTGAGCAGACCGCCCGGCGCGCGCAGCGCGAGCGCGCACGTGCCCAG GACGATGCAAGGATCCGCGAGCAAGCCGACGCGAATGCCTCCGCACTGGGGCGGGAAGCGTGGAAGACATACACCAAGTA CTTCGATGAGCCGGCGCAGCGCCGCGTGGTCGATCAGGAGTATCCCCAGCAGCTGGAGCACTTCGGGCGCGAGGTGCTGG CCAGGCTGGACCCGCCCTACCTCGCCTGGCTCAAGAGTCCCTCGTTGACGACCTACCTGACCCACACCTTCGACGAGCAC GATCTCGACAGCGGTGCCTCCTATACGGCCCTGGCGACCCAACTGCTGCACCATGCCAGCGGCCGTGGCGCGGTGTTCGA CTACCTGTGCCAGAGCATCCAGCAGGCGCCGACCGCGCCCGAGGCCTGGGTGGCGCGGGCGTTGGCGCTCAATCACGCGC CGCTGATCCAGGCGAGCTGGGAGGAGGCGGCCAGGAAGGGCAGCGAGCGCGAGCCATTCCTGCCGGAGTTCGTGGAGAAG TTCCACGACAAGTTCAAGGATGTGCTGGTGGCCGGTGGCAAGGGGGAATTGAACCGGCCGATGGTGGATGCGGTGGCGCG CTTCATGTACCAGCTGACCGGCCCGCTGGTGCGCGAGCTGGGGTCCGCGCTGGATCACGGCATGGCGTTTGCGGCCCTGC CGCTGCCGTCGAAATGGCAGCTGGGCTTGTTGGGCGCGGTGGCGCGCGCGGAGACGCCGACCCTGCGGATGGTGGATCTG CGCGGCACGCGCAGTTTCAGCGAAGCGACCAAGCTGCTGGCCAATCTGGTGTCCTCGCTGGGCGCCGGGCCGGCGGGCGC GGCGCGCGGCGCGGTGCGGCCGACGCTGCGGCCGGTGATGGACACGGCCGAGCGCTATCCGTTCCGGGCGGTGATGCTGG TGGACGAGGCCAAGGTCGCGCAGCTGGAAGGCAGCGGCGGTGCGGCGCTGAAGGCCGGCATGGCCGAGGCGCTGAGCGCG CGGGAATTCGATGACGTGATGCAGGAATCGGTGGGCAAGCTGGCCAGCCTGGAAGTGAAGGTGGCGGTGGTGCAGGCGAT CCTGTCGTCGATCACGCTGTATCTGTCGTACGGCAAACTGATGAAGGCCGAGGAGGACAAGGTGTGGAGCGAACGGATCA ACGTGGCCGGCGGGGTGATCGGATTGGTGGGTGGATTGACCGAAGCCACCGGCACTGTGCTGGAGAAGACCCCCTGGGGC CAGACCCGCCTGAGCTGGCAGTTCCGGTTCCAGGCGGTGGTGATCGAGAGCCGTGCGGGTTGGTTTACCGGCACCGGCAA GCTGATGGGCGTGGTGGGCGGGGTGATTGGGGGGGTGTTGGCGATTAAGGATGGTATAGAGACGCGTAAAAAACATCCGG TAATTACTGTGCTTTTGATAGGCTTGGGCGCAGCTTCTATATTCTCAGCGGTTATGTTGATTTTTACGTCTGTCGCTGGC ATTGGGGGCGAATTCAACTCTGATTCGCAACGCTGTTGA
Upstream 100 bases:
>100_bases GTGGAAGCCGAGTGCCAGGTCGAGCCGAACGACCCGCACATCTGGCCGATCCCCAACTCGATAGGCGAGTTCGTCACCAC CGTGCCGGGCTTGATGTCCT
Downstream 100 bases:
>100_bases GGACCTCCTCGGAGAAGACTTCGAGGGGCGTTTTGAATCCAAGTATCTTGCGCGGACGATTGTAGAGCCGCTGCTCGATC CATCGCAGGTGCGCATCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 812; Mature: 812
Protein sequence:
>812_residues MRCARRRASRHRPMHPAILHRSSRIGARSNVDGPRCITVKDAARATKVWLGFSDVTWKAAVLQKHADAAYRQAHMRCLDI AQWRAGGQLQHASDFAELASRVAEYATTPEQLLAQTRAYVKTLLPVPLKTVGELRGADALATRARESSSRLLQQLLPVAA GGVAAHKGRVTSATWAFSTQPFFADGNDAAAMLTWAAQTAAPLRPALVALDDPAGVAMELNGLALQRSMEFSENPQRKWK HETAVLIDALQEAVKHGAVEDEVHAQIAASRTAEGIANIDDAQDLPDATSYLWTTMTQGSDVALREQTARRAQRERARAQ DDARIREQADANASALGREAWKTYTKYFDEPAQRRVVDQEYPQQLEHFGREVLARLDPPYLAWLKSPSLTTYLTHTFDEH DLDSGASYTALATQLLHHASGRGAVFDYLCQSIQQAPTAPEAWVARALALNHAPLIQASWEEAARKGSEREPFLPEFVEK FHDKFKDVLVAGGKGELNRPMVDAVARFMYQLTGPLVRELGSALDHGMAFAALPLPSKWQLGLLGAVARAETPTLRMVDL RGTRSFSEATKLLANLVSSLGAGPAGAARGAVRPTLRPVMDTAERYPFRAVMLVDEAKVAQLEGSGGAALKAGMAEALSA REFDDVMQESVGKLASLEVKVAVVQAILSSITLYLSYGKLMKAEEDKVWSERINVAGGVIGLVGGLTEATGTVLEKTPWG QTRLSWQFRFQAVVIESRAGWFTGTGKLMGVVGGVIGGVLAIKDGIETRKKHPVITVLLIGLGAASIFSAVMLIFTSVAG IGGEFNSDSQRC
Sequences:
>Translated_812_residues MRCARRRASRHRPMHPAILHRSSRIGARSNVDGPRCITVKDAARATKVWLGFSDVTWKAAVLQKHADAAYRQAHMRCLDI AQWRAGGQLQHASDFAELASRVAEYATTPEQLLAQTRAYVKTLLPVPLKTVGELRGADALATRARESSSRLLQQLLPVAA GGVAAHKGRVTSATWAFSTQPFFADGNDAAAMLTWAAQTAAPLRPALVALDDPAGVAMELNGLALQRSMEFSENPQRKWK HETAVLIDALQEAVKHGAVEDEVHAQIAASRTAEGIANIDDAQDLPDATSYLWTTMTQGSDVALREQTARRAQRERARAQ DDARIREQADANASALGREAWKTYTKYFDEPAQRRVVDQEYPQQLEHFGREVLARLDPPYLAWLKSPSLTTYLTHTFDEH DLDSGASYTALATQLLHHASGRGAVFDYLCQSIQQAPTAPEAWVARALALNHAPLIQASWEEAARKGSEREPFLPEFVEK FHDKFKDVLVAGGKGELNRPMVDAVARFMYQLTGPLVRELGSALDHGMAFAALPLPSKWQLGLLGAVARAETPTLRMVDL RGTRSFSEATKLLANLVSSLGAGPAGAARGAVRPTLRPVMDTAERYPFRAVMLVDEAKVAQLEGSGGAALKAGMAEALSA REFDDVMQESVGKLASLEVKVAVVQAILSSITLYLSYGKLMKAEEDKVWSERINVAGGVIGLVGGLTEATGTVLEKTPWG QTRLSWQFRFQAVVIESRAGWFTGTGKLMGVVGGVIGGVLAIKDGIETRKKHPVITVLLIGLGAASIFSAVMLIFTSVAG IGGEFNSDSQRC >Mature_812_residues MRCARRRASRHRPMHPAILHRSSRIGARSNVDGPRCITVKDAARATKVWLGFSDVTWKAAVLQKHADAAYRQAHMRCLDI AQWRAGGQLQHASDFAELASRVAEYATTPEQLLAQTRAYVKTLLPVPLKTVGELRGADALATRARESSSRLLQQLLPVAA GGVAAHKGRVTSATWAFSTQPFFADGNDAAAMLTWAAQTAAPLRPALVALDDPAGVAMELNGLALQRSMEFSENPQRKWK HETAVLIDALQEAVKHGAVEDEVHAQIAASRTAEGIANIDDAQDLPDATSYLWTTMTQGSDVALREQTARRAQRERARAQ DDARIREQADANASALGREAWKTYTKYFDEPAQRRVVDQEYPQQLEHFGREVLARLDPPYLAWLKSPSLTTYLTHTFDEH DLDSGASYTALATQLLHHASGRGAVFDYLCQSIQQAPTAPEAWVARALALNHAPLIQASWEEAARKGSEREPFLPEFVEK FHDKFKDVLVAGGKGELNRPMVDAVARFMYQLTGPLVRELGSALDHGMAFAALPLPSKWQLGLLGAVARAETPTLRMVDL RGTRSFSEATKLLANLVSSLGAGPAGAARGAVRPTLRPVMDTAERYPFRAVMLVDEAKVAQLEGSGGAALKAGMAEALSA REFDDVMQESVGKLASLEVKVAVVQAILSSITLYLSYGKLMKAEEDKVWSERINVAGGVIGLVGGLTEATGTVLEKTPWG QTRLSWQFRFQAVVIESRAGWFTGTGKLMGVVGGVIGGVLAIKDGIETRKKHPVITVLLIGLGAASIFSAVMLIFTSVAG IGGEFNSDSQRC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88030; Mature: 88030
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCARRRASRHRPMHPAILHRSSRIGARSNVDGPRCITVKDAARATKVWLGFSDVTWKAA CCCHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCEEEEECHHHHHHHEEECCCCHHHHHH VLQKHADAAYRQAHMRCLDIAQWRAGGQLQHASDFAELASRVAEYATTPEQLLAQTRAYV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH KTLLPVPLKTVGELRGADALATRARESSSRLLQQLLPVAAGGVAAHKGRVTSATWAFSTQ HHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCEEEEEECCC PFFADGNDAAAMLTWAAQTAAPLRPALVALDDPAGVAMELNGLALQRSMEFSENPQRKWK CCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCEEEECCHHHHHHCCCCCCHHHHHH HETAVLIDALQEAVKHGAVEDEVHAQIAASRTAEGIANIDDAQDLPDATSYLWTTMTQGS HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHCCCCC DVALREQTARRAQRERARAQDDARIREQADANASALGREAWKTYTKYFDEPAQRRVVDQE CHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHCCCHH YPQQLEHFGREVLARLDPPYLAWLKSPSLTTYLTHTFDEHDLDSGASYTALATQLLHHAS HHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEHHHHCCCCCCCCCCCHHHHHHHHHHHHCC GRGAVFDYLCQSIQQAPTAPEAWVARALALNHAPLIQASWEEAARKGSEREPFLPEFVEK CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCHHHHHH FHDKFKDVLVAGGKGELNRPMVDAVARFMYQLTGPLVRELGSALDHGMAFAALPLPSKWQ HHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCC LGLLGAVARAETPTLRMVDLRGTRSFSEATKLLANLVSSLGAGPAGAARGAVRPTLRPVM HHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH DTAERYPFRAVMLVDEAKVAQLEGSGGAALKAGMAEALSAREFDDVMQESVGKLASLEVK HHHHHCCEEEEEEECCHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAVVQAILSSITLYLSYGKLMKAEEDKVWSERINVAGGVIGLVGGLTEATGTVLEKTPWG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCC QTRLSWQFRFQAVVIESRAGWFTGTGKLMGVVGGVIGGVLAIKDGIETRKKHPVITVLLI CCEEEEEEEEEEEEEECCCCEECCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCEEHHHH GLGAASIFSAVMLIFTSVAGIGGEFNSDSQRC HHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MRCARRRASRHRPMHPAILHRSSRIGARSNVDGPRCITVKDAARATKVWLGFSDVTWKAA CCCHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCEEEEECHHHHHHHEEECCCCHHHHHH VLQKHADAAYRQAHMRCLDIAQWRAGGQLQHASDFAELASRVAEYATTPEQLLAQTRAYV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH KTLLPVPLKTVGELRGADALATRARESSSRLLQQLLPVAAGGVAAHKGRVTSATWAFSTQ HHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCEEEEEECCC PFFADGNDAAAMLTWAAQTAAPLRPALVALDDPAGVAMELNGLALQRSMEFSENPQRKWK CCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCEEEECCHHHHHHCCCCCCHHHHHH HETAVLIDALQEAVKHGAVEDEVHAQIAASRTAEGIANIDDAQDLPDATSYLWTTMTQGS HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHCCCCC DVALREQTARRAQRERARAQDDARIREQADANASALGREAWKTYTKYFDEPAQRRVVDQE CHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHCCCHH YPQQLEHFGREVLARLDPPYLAWLKSPSLTTYLTHTFDEHDLDSGASYTALATQLLHHAS HHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEHHHHCCCCCCCCCCCHHHHHHHHHHHHCC GRGAVFDYLCQSIQQAPTAPEAWVARALALNHAPLIQASWEEAARKGSEREPFLPEFVEK CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCHHHHHH FHDKFKDVLVAGGKGELNRPMVDAVARFMYQLTGPLVRELGSALDHGMAFAALPLPSKWQ HHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCC LGLLGAVARAETPTLRMVDLRGTRSFSEATKLLANLVSSLGAGPAGAARGAVRPTLRPVM HHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH DTAERYPFRAVMLVDEAKVAQLEGSGGAALKAGMAEALSAREFDDVMQESVGKLASLEVK HHHHHCCEEEEEEECCHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAVVQAILSSITLYLSYGKLMKAEEDKVWSERINVAGGVIGLVGGLTEATGTVLEKTPWG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCC QTRLSWQFRFQAVVIESRAGWFTGTGKLMGVVGGVIGGVLAIKDGIETRKKHPVITVLLI CCEEEEEEEEEEEEEECCCCEECCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCEEHHHH GLGAASIFSAVMLIFTSVAGIGGEFNSDSQRC HHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA