| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84624930
Identifier: 84624930
GI number: 84624930
Start: 3717179
End: 3717604
Strand: Reverse
Name: 84624930
Synonym: XOO_3273
Alternate gene names: NA
Gene position: 3717604-3717179 (Counterclockwise)
Preceding gene: 84624931
Following gene: 84624928
Centisome position: 75.25
GC content: 68.54
Gene sequence:
>426_bases GTGGACGGGCCGCGCTGCATCACGGTCAAGGATGCGGCACGCGCCACCAAGGTATGGCTGGGGTTCTCGGATGTGACGTG GAAAGCGGCCGTGCTGCAGAAGCACGCCGATGCCGCCTACCGACAAGCGCATATGCGCTGCCTGGACATCGCCCAATGGC GCGCTGGCGGGCAGCTGCAACATGTCAGCGACTTCGCCGAGCTTGCCAGCCGCGTGGCCGAGTACGCGACCACGCCGGAG CCGCTGCTTGCCCAGACCCAGGCCTATGTCAAAACGCTGCTGCCGGTGCCGTTCAAGAGCGTCGGCGAGCTGCGCGGTGC CGTGCCTTGGCAACGCGCGCCCGCGAGTCGAGTTCACGGCTGCTGCAGCAACTGCTGCCGGTGGCGGCCGGCGGCGTTGC CGCCCACGACGTCCCCCCAAGTTTGA
Upstream 100 bases:
>100_bases TTGATGTCCTATGCGATGCGCAAGGCGCAGGGCATCAAGACACCGCCCGATGCACCCAGCGATCTTGCATCGCAGTTCAA GGATTGGGGCAAGAAGTAAC
Downstream 100 bases:
>100_bases GTAGCACCTCAGTTTGGAGTCCAATTCCCTACCCCGAGGAGATTGGACGTGAAGAAGCGTTTTTCCGAAGAACAGATCAT CGGCGTCCTTGCGCGAAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MDGPRCITVKDAARATKVWLGFSDVTWKAAVLQKHADAAYRQAHMRCLDIAQWRAGGQLQHVSDFAELASRVAEYATTPE PLLAQTQAYVKTLLPVPFKSVGELRGAVPWQRAPASRVHGCCSNCCRWRPAALPPTTSPQV
Sequences:
>Translated_141_residues MDGPRCITVKDAARATKVWLGFSDVTWKAAVLQKHADAAYRQAHMRCLDIAQWRAGGQLQHVSDFAELASRVAEYATTPE PLLAQTQAYVKTLLPVPFKSVGELRGAVPWQRAPASRVHGCCSNCCRWRPAALPPTTSPQV >Mature_141_residues MDGPRCITVKDAARATKVWLGFSDVTWKAAVLQKHADAAYRQAHMRCLDIAQWRAGGQLQHVSDFAELASRVAEYATTPE PLLAQTQAYVKTLLPVPFKSVGELRGAVPWQRAPASRVHGCCSNCCRWRPAALPPTTSPQV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15483; Mature: 15483
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGPRCITVKDAARATKVWLGFSDVTWKAAVLQKHADAAYRQAHMRCLDIAQWRAGGQLQ CCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH HVSDFAELASRVAEYATTPEPLLAQTQAYVKTLLPVPFKSVGELRGAVPWQRAPASRVHG HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHH CCSNCCRWRPAALPPTTSPQV HHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MDGPRCITVKDAARATKVWLGFSDVTWKAAVLQKHADAAYRQAHMRCLDIAQWRAGGQLQ CCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH HVSDFAELASRVAEYATTPEPLLAQTQAYVKTLLPVPFKSVGELRGAVPWQRAPASRVHG HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHH CCSNCCRWRPAALPPTTSPQV HHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA