| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84624910
Identifier: 84624910
GI number: 84624910
Start: 3694500
End: 3694766
Strand: Reverse
Name: 84624910
Synonym: XOO_3253
Alternate gene names: NA
Gene position: 3694766-3694500 (Counterclockwise)
Preceding gene: 84624911
Following gene: 84624908
Centisome position: 74.79
GC content: 64.42
Gene sequence:
>267_bases ATGTCGGACGTTGTACGCGATGTGCAGTCACACCCGGGCTACTACCTGCCAGAAGGCGCGCAGTACCGTTTGCAGCAGCT GCGCGACCACATGCGGTTTCTGGCGCGCTTGGCGCAGCCACGCACGCAGGCCGAAGAGCAGGCGCGGCAGCCGGCCATCT GCATGGACGAGTTGGCGTTTTGTCTGGAGCTACTGGCCGAGCAGGTGGGCCGGGTGCTGGACGATGTGGAGTGCGCTGTC GTCGAAGGGGCGTATCCATTGCCATGA
Upstream 100 bases:
>100_bases GGGAATACGCCCGCCGGCTGTTAGCGGTTTCGAGCCTCCCGACTTCCCGTCCGTCGCCTTGCGGTGGGCGGGGGCGATTC CATGGAATGAGGAGCAGGCC
Downstream 100 bases:
>100_bases CGTGGTGTGCTCTCTGGATCTTGTTGAGGTCTGGATCACCGCCGAATGAACGCATGATCGGCACGGGTATGGCAGCACGC AGCGGTGCCGATTGAATGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MSDVVRDVQSHPGYYLPEGAQYRLQQLRDHMRFLARLAQPRTQAEEQARQPAICMDELAFCLELLAEQVGRVLDDVECAV VEGAYPLP
Sequences:
>Translated_88_residues MSDVVRDVQSHPGYYLPEGAQYRLQQLRDHMRFLARLAQPRTQAEEQARQPAICMDELAFCLELLAEQVGRVLDDVECAV VEGAYPLP >Mature_87_residues SDVVRDVQSHPGYYLPEGAQYRLQQLRDHMRFLARLAQPRTQAEEQARQPAICMDELAFCLELLAEQVGRVLDDVECAVV EGAYPLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10017; Mature: 9885
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDVVRDVQSHPGYYLPEGAQYRLQQLRDHMRFLARLAQPRTQAEEQARQPAICMDELAF CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHH CLELLAEQVGRVLDDVECAVVEGAYPLP HHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SDVVRDVQSHPGYYLPEGAQYRLQQLRDHMRFLARLAQPRTQAEEQARQPAICMDELAF HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHH CLELLAEQVGRVLDDVECAVVEGAYPLP HHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA