| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is estA [H]
Identifier: 84624832
GI number: 84624832
Start: 3594381
End: 3596198
Strand: Reverse
Name: estA [H]
Synonym: XOO_3175
Alternate gene names: 84624832
Gene position: 3596198-3594381 (Counterclockwise)
Preceding gene: 84624837
Following gene: 84624829
Centisome position: 72.79
GC content: 66.94
Gene sequence:
>1818_bases ATGGCTTCAACACTTTGCCCGATCCGCTCCCTGATGGCGATCGCCATCGCTCTTGCGGCCACCCCGGCCATGGCCGAGTC GGCTTTCGACCGGACGGTGTTCTTCGGTGACAGCCTCACCGACAGTGGCTATTACAACCCGCTGCTGCCGGCTGCTTCGC GCGCTGTCACCGGCAAGTTCACCACCAACCCGGGCTGGGTGTGGGCCGAGTACGTGGCCGATCATTTCGGTACCAACGCT GCCCCGAACGGCAACGGCCAGATTGGCGACAACTACGCCGCCGGCGGCGCGCGCATCCAGGCCAGTGCGGTCAGCGCGCT GGGCGCGGCACCGTCGGTGAGCAGCCAGATCAACACCTACCTCACCGCCAACGGCGGCCGCGCCGACCCGAATGCGCTCT ACACCGTATGGGGCGGCGCCAATGATCTGCTCGCCGCGGCCACCGTGCCGGCACAGGCGCAGGCCATCATCGGTAGCGCG GTCACCGCCCAGGTCGGTGCCGTGGCCGCCCTGCAGAATGCCGGCGCGCGGTACGTCATGGTGCCGACCATTCCAGACGT CGGCCTTACCCCGCGCTTCCGCGCTGGCGGCGCGGTGGGAATGGCGCAGGGCACCGGCGCAGCCACCGCCTACAACAACG CCTTGTTCAACGGTCTGCAGTCGGCCGGCCTGCGCGTGATCCCGGTCGACACCTTCCACATGCTGCAGGAAATCGTCGCC AGCCCGGGCACCTACGGTTTCAGTAATGTCACCAACACCGCCTGCAACCCGGCCGTGCCGCTGCCGGCCTGTAACCCGAC CAGCCTGGTCGCCGCCAATGCGCAGAACACCTATGTGTTCGCCGATGGCGTCCACCCGACCACGGCCGTGCACCAGATTT TGGGCGAGTACGCCATCTCGCTGCTGGAAGCGCCGCGTCTGCAGCAGGTGCTGATCCATTCCGCGCAGGCCGTCGGCCGC GCGCGCGCCGATCAGGTGGCGTGGCATCTGGACGGCAAGCCGGACGCCGATGGCATGCGTTGGTGGGGGAGCGTGCGTGG CGACATGCAGCGTTACGACCACGCCGATCTGTATGACGGGATGGCGCCGGCCGGCCTGTTCGGTGTGGATTGGACTGCGG GCGACATGGTGTTCGGTGGCTTTGCCGGTTTCGGTCGCATGGATGCCGACTTCGGTCACCGCAACGGCAGCTTCAAGCAG GACGACAGCACGCTGGGTGGTTTCTTTGGCTGGTACACCGGCCCGGTGTGGGTCAATGCGCAGGTCAGCTACAGCTGGCT GAGCTACGACGTCGACCGCGAAGTGCAGCTCGGGCCAGCCACCCGCGTGCATCGCGGCTCGCCGGACGGCAGCAATCTCA CTGCCGCGCTCAACGCCGGTTATTCGCTGGGCGAAGGCAACGTCAAGTACGGCCCGGTGGCCGGCCTGACCTGGCAGAAG ATCAAGCTCGACGGCTACACCGAGAGCAACGACACCTCCACTGCGCTGGGCTATGCCAGCCAGGACGTCGACTCGCTGGT CGGCCGCGTTGGCTTCCAGGTGCGTCTGGACGGCGCCATGGTCAAACCGTACCTGCAGGCAACCTACGACCACGAGTTCA AGGAGGGCGGCGAAGCCAGCGCTTGGTTGCAGTCGATGCCGGACGTGGGCATGTACACCGTTCCGGGCCAGGACTTCGAT CGCAACTACGCCACCGTGGTGTTGGGTGCGCGTACCGGCCTGTGGGGCCTGCAGAGCAACGTCGGCCTGAGCACCACCAC GGCCCGGCGCAGCGCGCGTGATGCCACCTTGTTCGTGAACTTCAGCGGCAACTTCTGA
Upstream 100 bases:
>100_bases GCAGCGTGAGCACGGAGGGCGGGGATGAAACCATTGCCATTCGCCGACGTACGTATGCAGGCCGGTCCGGTCGTCCCATC CACTCAAAGCAGGCACTCCC
Downstream 100 bases:
>100_bases AGCGCGCGGTAAGCCACGGGTAGCAAGCAAGACACGAGGGCCGGGCAACCGGCCCTCGTCCTATCTGCGCACATTGCGCC AGACACCCGCACCCGCATAA
Product: lipase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 605; Mature: 604
Protein sequence:
>605_residues MASTLCPIRSLMAIAIALAATPAMAESAFDRTVFFGDSLTDSGYYNPLLPAASRAVTGKFTTNPGWVWAEYVADHFGTNA APNGNGQIGDNYAAGGARIQASAVSALGAAPSVSSQINTYLTANGGRADPNALYTVWGGANDLLAAATVPAQAQAIIGSA VTAQVGAVAALQNAGARYVMVPTIPDVGLTPRFRAGGAVGMAQGTGAATAYNNALFNGLQSAGLRVIPVDTFHMLQEIVA SPGTYGFSNVTNTACNPAVPLPACNPTSLVAANAQNTYVFADGVHPTTAVHQILGEYAISLLEAPRLQQVLIHSAQAVGR ARADQVAWHLDGKPDADGMRWWGSVRGDMQRYDHADLYDGMAPAGLFGVDWTAGDMVFGGFAGFGRMDADFGHRNGSFKQ DDSTLGGFFGWYTGPVWVNAQVSYSWLSYDVDREVQLGPATRVHRGSPDGSNLTAALNAGYSLGEGNVKYGPVAGLTWQK IKLDGYTESNDTSTALGYASQDVDSLVGRVGFQVRLDGAMVKPYLQATYDHEFKEGGEASAWLQSMPDVGMYTVPGQDFD RNYATVVLGARTGLWGLQSNVGLSTTTARRSARDATLFVNFSGNF
Sequences:
>Translated_605_residues MASTLCPIRSLMAIAIALAATPAMAESAFDRTVFFGDSLTDSGYYNPLLPAASRAVTGKFTTNPGWVWAEYVADHFGTNA APNGNGQIGDNYAAGGARIQASAVSALGAAPSVSSQINTYLTANGGRADPNALYTVWGGANDLLAAATVPAQAQAIIGSA VTAQVGAVAALQNAGARYVMVPTIPDVGLTPRFRAGGAVGMAQGTGAATAYNNALFNGLQSAGLRVIPVDTFHMLQEIVA SPGTYGFSNVTNTACNPAVPLPACNPTSLVAANAQNTYVFADGVHPTTAVHQILGEYAISLLEAPRLQQVLIHSAQAVGR ARADQVAWHLDGKPDADGMRWWGSVRGDMQRYDHADLYDGMAPAGLFGVDWTAGDMVFGGFAGFGRMDADFGHRNGSFKQ DDSTLGGFFGWYTGPVWVNAQVSYSWLSYDVDREVQLGPATRVHRGSPDGSNLTAALNAGYSLGEGNVKYGPVAGLTWQK IKLDGYTESNDTSTALGYASQDVDSLVGRVGFQVRLDGAMVKPYLQATYDHEFKEGGEASAWLQSMPDVGMYTVPGQDFD RNYATVVLGARTGLWGLQSNVGLSTTTARRSARDATLFVNFSGNF >Mature_604_residues ASTLCPIRSLMAIAIALAATPAMAESAFDRTVFFGDSLTDSGYYNPLLPAASRAVTGKFTTNPGWVWAEYVADHFGTNAA PNGNGQIGDNYAAGGARIQASAVSALGAAPSVSSQINTYLTANGGRADPNALYTVWGGANDLLAAATVPAQAQAIIGSAV TAQVGAVAALQNAGARYVMVPTIPDVGLTPRFRAGGAVGMAQGTGAATAYNNALFNGLQSAGLRVIPVDTFHMLQEIVAS PGTYGFSNVTNTACNPAVPLPACNPTSLVAANAQNTYVFADGVHPTTAVHQILGEYAISLLEAPRLQQVLIHSAQAVGRA RADQVAWHLDGKPDADGMRWWGSVRGDMQRYDHADLYDGMAPAGLFGVDWTAGDMVFGGFAGFGRMDADFGHRNGSFKQD DSTLGGFFGWYTGPVWVNAQVSYSWLSYDVDREVQLGPATRVHRGSPDGSNLTAALNAGYSLGEGNVKYGPVAGLTWQKI KLDGYTESNDTSTALGYASQDVDSLVGRVGFQVRLDGAMVKPYLQATYDHEFKEGGEASAWLQSMPDVGMYTVPGQDFDR NYATVVLGARTGLWGLQSNVGLSTTTARRSARDATLFVNFSGNF
Specific function: Unknown
COG id: COG3240
COG function: function code IR; Phospholipase/lecithinase/hemolysin
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005546 - InterPro: IPR013830 - InterPro: IPR013831 - InterPro: IPR017186 - InterPro: IPR001087 - InterPro: IPR008265 - InterPro: IPR006315 [H]
Pfam domain/function: PF03797 Autotransporter; PF00657 Lipase_GDSL [H]
EC number: =3.1.1.1 [H]
Molecular weight: Translated: 63517; Mature: 63386
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASTLCPIRSLMAIAIALAATPAMAESAFDRTVFFGDSLTDSGYYNPLLPAASRAVTGKF CCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCEEECEE TTNPGWVWAEYVADHFGTNAAPNGNGQIGDNYAAGGARIQASAVSALGAAPSVSSQINTY ECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHCCCCCCCCCCEEE LTANGGRADPNALYTVWGGANDLLAAATVPAQAQAIIGSAVTAQVGAVAALQNAGARYVM EEECCCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE VPTIPDVGLTPRFRAGGAVGMAQGTGAATAYNNALFNGLQSAGLRVIPVDTFHMLQEIVA ECCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHC SPGTYGFSNVTNTACNPAVPLPACNPTSLVAANAQNTYVFADGVHPTTAVHQILGEYAIS CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHHHH LLEAPRLQQVLIHSAQAVGRARADQVAWHLDGKPDADGMRWWGSVRGDMQRYDHADLYDG HHCCCHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHCC MAPAGLFGVDWTAGDMVFGGFAGFGRMDADFGHRNGSFKQDDSTLGGFFGWYTGPVWVNA CCCCCEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEECCCEEEEE QVSYSWLSYDVDREVQLGPATRVHRGSPDGSNLTAALNAGYSLGEGNVKYGPVAGLTWQK EEEEEEEEECCCCCEECCCCCEEECCCCCCCCEEEEEECCEEECCCCEEECCCCCCEEEE IKLDGYTESNDTSTALGYASQDVDSLVGRVGFQVRLDGAMVKPYLQATYDHEFKEGGEAS EEECCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCHHHCHHHHHHCCCHHHCCCCHH AWLQSMPDVGMYTVPGQDFDRNYATVVLGARTGLWGLQSNVGLSTTTARRSARDATLFVN HHHHCCCCCCEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCCEEEEEE FSGNF ECCCC >Mature Secondary Structure ASTLCPIRSLMAIAIALAATPAMAESAFDRTVFFGDSLTDSGYYNPLLPAASRAVTGKF CCCHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCEEECEE TTNPGWVWAEYVADHFGTNAAPNGNGQIGDNYAAGGARIQASAVSALGAAPSVSSQINTY ECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHCCCCCCCCCCEEE LTANGGRADPNALYTVWGGANDLLAAATVPAQAQAIIGSAVTAQVGAVAALQNAGARYVM EEECCCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE VPTIPDVGLTPRFRAGGAVGMAQGTGAATAYNNALFNGLQSAGLRVIPVDTFHMLQEIVA ECCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHC SPGTYGFSNVTNTACNPAVPLPACNPTSLVAANAQNTYVFADGVHPTTAVHQILGEYAIS CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHHHH LLEAPRLQQVLIHSAQAVGRARADQVAWHLDGKPDADGMRWWGSVRGDMQRYDHADLYDG HHCCCHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHCC MAPAGLFGVDWTAGDMVFGGFAGFGRMDADFGHRNGSFKQDDSTLGGFFGWYTGPVWVNA CCCCCEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEECCCEEEEE QVSYSWLSYDVDREVQLGPATRVHRGSPDGSNLTAALNAGYSLGEGNVKYGPVAGLTWQK EEEEEEEEECCCCCEECCCCCEEECCCCCCCCEEEEEECCEEECCCCEEECCCCCCEEEE IKLDGYTESNDTSTALGYASQDVDSLVGRVGFQVRLDGAMVKPYLQATYDHEFKEGGEAS EEECCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCHHHCHHHHHHCCCHHHCCCCHH AWLQSMPDVGMYTVPGQDFDRNYATVVLGARTGLWGLQSNVGLSTTTARRSARDATLFVN HHHHCCCCCCEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCCEEEEEE FSGNF ECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10559163; 10984043 [H]