| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84624491
Identifier: 84624491
GI number: 84624491
Start: 3185532
End: 3186746
Strand: Direct
Name: 84624491
Synonym: XOO_2834
Alternate gene names: NA
Gene position: 3185532-3186746 (Clockwise)
Preceding gene: 84624490
Following gene: 84624492
Centisome position: 64.48
GC content: 64.61
Gene sequence:
>1215_bases ATGCAGCCCTCCCTTCGCATTATCAAGCACTGCCTGTACACCGCGACTGAGCGGCTGGCGCAGGAGCTGGCCCAGCCGGG CGATGCATTGCCGCAATGGGACCGGCTGCAATGGCAGCTGGCGGCGGCGGCAGCGGCGGCACATGGCGTGTCGCCGCTGC TGCAGCGCCGCTCGTTGTGGCAGAACGCCGAATGGAACACCTTCCTGAGCGAGCAGCGTGGCCATGTCGAAGACCGCCAT CGGCGCATCGCGCTGTTGCTGACCCGTATCGATGCCGCTGCGCGCGGTGCCGGCATCGCACTGGTGGGCCTGAAAGGCAC TGCGCTGCATCGACTGGGCGTGTATCTGCCCGGCGACCGCCCAATGGCCGATATCGATCTGCTGGTGGAGCCGGAAGACG CGCCTGCGGCGGCCACGCTGTTGTGCGAACTCGGTTATGTCGCTTCTTTCGAACAATGGAAGCATCAGGTGTTCAAGCCG ATGCAGGGCGAGGCTGTTGCCGGGTTGGGCGAACACCGCGATGCGCCGATCAATATCGAGTTGCATACGCGCATCCAGGA ACGTTTGCCGGTGCGCAGTGTGGAGATCACTGCCCGGATCCGGCCGGAGCGCCCGCAACCGGGTTTGAACCCCTATCCGT CCATCGGTGCATTGATGTGTCACTTGCTGCTGCACGCGGCCGGCGGTATCTGTCACCGCAGTATTCGCCTGATGCATTTG CATGATCTTGCCTTGCTGGCCACGCGCATGGGTCCGCGCGATTGGGAAGAATTGTGGGAAGACGCCTCCATGCCACCGTG GTGGGCGCTGCCGCCATTGCTGTTGCTGCAGCGTTATTACCGCGCAGTGGTCCCGGCTGCGCTGATGGCACGCCTGCATG GGGTCTGTCCTGCGCTGCTGCGCCTGAGCGCGGCACGGCAAACGCTCACCGCCGCATCGTGCTCCCACCTGTGGCTGTCG GCGTTGCCTGGGATTGAATGGTCGCGTTCGTTTGGCGAGGCGCGGCAGTATCTGCACAACCGCGTGGTGCCTTCGGCAGA AAGCCGCAAGGAACGCGCAGACATGCTGCAGACCCAGTTATGGCTGCAGGATCAGCCGTGGCTGCGGCAGACCCAGGCGC GACGTCTAATAACGCGCCTGACTCGGCCAGTGCCGCGCACCGACATGTTGTACGTGGTGCGTGCGGCGCTGGATGGCTAT CTGCAGCCGGCGTGA
Upstream 100 bases:
>100_bases CTGCGCGTTAGCCACGGCAATTGGCCACCGTACTGGTGCGCTAGCCCTCGCCTGCTCTCACGTTGTTTCCTCCATCGTTT CGCCTGACCGGACCACACGC
Downstream 100 bases:
>100_bases GATTACATTTCACGAGGCGGCTTCAACTCTGATTCGCAACACCAACGCTTGTGAAGTGGTCCAGGCGACCTGACCTGAGC GACTTCATTGCCAAGTGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MQPSLRIIKHCLYTATERLAQELAQPGDALPQWDRLQWQLAAAAAAAHGVSPLLQRRSLWQNAEWNTFLSEQRGHVEDRH RRIALLLTRIDAAARGAGIALVGLKGTALHRLGVYLPGDRPMADIDLLVEPEDAPAAATLLCELGYVASFEQWKHQVFKP MQGEAVAGLGEHRDAPINIELHTRIQERLPVRSVEITARIRPERPQPGLNPYPSIGALMCHLLLHAAGGICHRSIRLMHL HDLALLATRMGPRDWEELWEDASMPPWWALPPLLLLQRYYRAVVPAALMARLHGVCPALLRLSAARQTLTAASCSHLWLS ALPGIEWSRSFGEARQYLHNRVVPSAESRKERADMLQTQLWLQDQPWLRQTQARRLITRLTRPVPRTDMLYVVRAALDGY LQPA
Sequences:
>Translated_404_residues MQPSLRIIKHCLYTATERLAQELAQPGDALPQWDRLQWQLAAAAAAAHGVSPLLQRRSLWQNAEWNTFLSEQRGHVEDRH RRIALLLTRIDAAARGAGIALVGLKGTALHRLGVYLPGDRPMADIDLLVEPEDAPAAATLLCELGYVASFEQWKHQVFKP MQGEAVAGLGEHRDAPINIELHTRIQERLPVRSVEITARIRPERPQPGLNPYPSIGALMCHLLLHAAGGICHRSIRLMHL HDLALLATRMGPRDWEELWEDASMPPWWALPPLLLLQRYYRAVVPAALMARLHGVCPALLRLSAARQTLTAASCSHLWLS ALPGIEWSRSFGEARQYLHNRVVPSAESRKERADMLQTQLWLQDQPWLRQTQARRLITRLTRPVPRTDMLYVVRAALDGY LQPA >Mature_404_residues MQPSLRIIKHCLYTATERLAQELAQPGDALPQWDRLQWQLAAAAAAAHGVSPLLQRRSLWQNAEWNTFLSEQRGHVEDRH RRIALLLTRIDAAARGAGIALVGLKGTALHRLGVYLPGDRPMADIDLLVEPEDAPAAATLLCELGYVASFEQWKHQVFKP MQGEAVAGLGEHRDAPINIELHTRIQERLPVRSVEITARIRPERPQPGLNPYPSIGALMCHLLLHAAGGICHRSIRLMHL HDLALLATRMGPRDWEELWEDASMPPWWALPPLLLLQRYYRAVVPAALMARLHGVCPALLRLSAARQTLTAASCSHLWLS ALPGIEWSRSFGEARQYLHNRVVPSAESRKERADMLQTQLWLQDQPWLRQTQARRLITRLTRPVPRTDMLYVVRAALDGY LQPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45541; Mature: 45541
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPSLRIIKHCLYTATERLAQELAQPGDALPQWDRLQWQLAAAAAAAHGVSPLLQRRSLW CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHH QNAEWNTFLSEQRGHVEDRHRRIALLLTRIDAAARGAGIALVGLKGTALHRLGVYLPGDR CCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEECCCC PMADIDLLVEPEDAPAAATLLCELGYVASFEQWKHQVFKPMQGEAVAGLGEHRDAPINIE CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCEEEE LHTRIQERLPVRSVEITARIRPERPQPGLNPYPSIGALMCHLLLHAAGGICHRSIRLMHL EHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHH HDLALLATRMGPRDWEELWEDASMPPWWALPPLLLLQRYYRAVVPAALMARLHGVCPALL HHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLSAARQTLTAASCSHLWLSALPGIEWSRSFGEARQYLHNRVVPSAESRKERADMLQTQL HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH WLQDQPWLRQTQARRLITRLTRPVPRTDMLYVVRAALDGYLQPA HCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MQPSLRIIKHCLYTATERLAQELAQPGDALPQWDRLQWQLAAAAAAAHGVSPLLQRRSLW CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHH QNAEWNTFLSEQRGHVEDRHRRIALLLTRIDAAARGAGIALVGLKGTALHRLGVYLPGDR CCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEECCCC PMADIDLLVEPEDAPAAATLLCELGYVASFEQWKHQVFKPMQGEAVAGLGEHRDAPINIE CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCEEEE LHTRIQERLPVRSVEITARIRPERPQPGLNPYPSIGALMCHLLLHAAGGICHRSIRLMHL EHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHH HDLALLATRMGPRDWEELWEDASMPPWWALPPLLLLQRYYRAVVPAALMARLHGVCPALL HHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLSAARQTLTAASCSHLWLSALPGIEWSRSFGEARQYLHNRVVPSAESRKERADMLQTQL HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH WLQDQPWLRQTQARRLITRLTRPVPRTDMLYVVRAALDGYLQPA HCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA