Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is ygjG [C]

Identifier: 84624292

GI number: 84624292

Start: 2940772

End: 2942124

Strand: Direct

Name: ygjG [C]

Synonym: XOO_2635

Alternate gene names: 84624292

Gene position: 2940772-2942124 (Clockwise)

Preceding gene: 84624291

Following gene: 84624294

Centisome position: 59.53

GC content: 67.41

Gene sequence:

>1353_bases
ATGCCCGACCACCTTCCCCGCGATGCGGCCGATGCGCTGCAGGCACCGGCGCAGCTGGATGCCTTCTGGATGCCATTCAC
CGCCAATCGCCAGTTCAAGGCGCGCCCTCGCCTGCTGGCCTCGGCACAGGGCATGTATTACCGCGACGTCGATGGCCGCC
AGATCCTGGACGGCACCGCCGGCCTGTGGTGCTGCAATGCCGGCCACAGCCGCGAGCGCATCGTGGCCGCGATCCGCGAA
CAGGCCGGCACGCTGGATTTCGCGCCGACCTTCCAGATGGGTTCGCCGCTGCCGTTCGTGCTGGCGCAACGGCTGGCCGC
AATCGCCCCACCCGGCCTGTGCCACGTGTTCTTCACCAACTCCGGCTCGGAAGCGGTGGATAGCGCGATGAAGATCGTGC
TGGCCTATCACCGGCTGCGCGGCGACGGCCAGCGCACCCGCTTCATCGGCCGCGAGAAGGCATACCACGGGGTCGGCTTC
GGCGGCATGTCCATCGGTGGGCTGCCCAATAACCGCAAATGGTTCGGCCCGTTGCTGGCCGGCACCGACCATCTGCGCCA
CACGCTGGATATCGAACGCAATGCCTACACGCGCGGCCTGCCCGCGCATGGCGCGGAGCTGGCCGACGATCTGGAACGGC
TGATCACCCTGCACGATGCGTCCACCATTGCCGCGGTTTTCGTCGAACCGGTGTCCGGTTCGGCCGGCGTGATACTGCCG
CCTGAAGGTTACCTGCAGCGGTTACGCGCCATCTGCAACCGCCACGGCATCGTGCTGGTGTTCGACGAAGTGATCACCGG
TTTCGGCCGCGTGGGCGATACGTTCGCCGCGCAGCGCTTCAGCGTCACTCCGGACATCATCACCGCTGCCAAGGGCCTGA
CCAGCGGCACCGTGCCGATGGGCGCGGTGCTGGTGGCCGATGCCATCCACGACGCCTTCATGCACGGGCCGCAGAGCGTG
ATCGAGCTCTTTCACGGCTACACCTATTCCGGCCATCCGCTGGCCTGCGCGGCCGCGATCGCCACGCTGGACACCTATGC
AGAGGAAGACCTGTTCACGCGTGCGATCACGCGCGGCGCGCAGTGGGAGGACGCAGTGCACAGCCTGCGCGGGCTGCCGC
ACGTCATCGATATCCGCAACATCGGCCTGATCGGGGCGATCGAGCTGGCGCCGCGCGACGGCGCCCCGGGTGCGCGCGGT
TACGAGATCTTCGAGCGCTGTTTCCATGAAGGCGGCCTGCTGGTGCGCGTCACCGGCGATGTCATCGCACTGTCACCGCC
ACTGATCGTCACGCCCGAGCAGATCGGGCAGATGGTGGAGACGCTGGGCAACATCCTGCGCAGCACTGCGTGA

Upstream 100 bases:

>100_bases
CACGACGCGCCCCGCCAATGCGGTGCGACTGCCGGTATCGGGGTGACGGCCGACGCATCAGCTGCGTACAGTCGGGCGAT
CCAAAGCGACGGAGCCTGCC

Downstream 100 bases:

>100_bases
ATTGGTGACGGTCACCAGCAACGTCATTGCGAAGGCGTCTTGCCCTACACCATGCCGCAATCAAGCGGCATGTCGAGCAT
GGAAGTCATTCAACATGGCG

Product: beta alanine--pyruvate transaminase

Products: NA

Alternate protein names: Omega-APT; Beta-alanine--pyruvate aminotransferase [H]

Number of amino acids: Translated: 450; Mature: 449

Protein sequence:

>450_residues
MPDHLPRDAADALQAPAQLDAFWMPFTANRQFKARPRLLASAQGMYYRDVDGRQILDGTAGLWCCNAGHSRERIVAAIRE
QAGTLDFAPTFQMGSPLPFVLAQRLAAIAPPGLCHVFFTNSGSEAVDSAMKIVLAYHRLRGDGQRTRFIGREKAYHGVGF
GGMSIGGLPNNRKWFGPLLAGTDHLRHTLDIERNAYTRGLPAHGAELADDLERLITLHDASTIAAVFVEPVSGSAGVILP
PEGYLQRLRAICNRHGIVLVFDEVITGFGRVGDTFAAQRFSVTPDIITAAKGLTSGTVPMGAVLVADAIHDAFMHGPQSV
IELFHGYTYSGHPLACAAAIATLDTYAEEDLFTRAITRGAQWEDAVHSLRGLPHVIDIRNIGLIGAIELAPRDGAPGARG
YEIFERCFHEGGLLVRVTGDVIALSPPLIVTPEQIGQMVETLGNILRSTA

Sequences:

>Translated_450_residues
MPDHLPRDAADALQAPAQLDAFWMPFTANRQFKARPRLLASAQGMYYRDVDGRQILDGTAGLWCCNAGHSRERIVAAIRE
QAGTLDFAPTFQMGSPLPFVLAQRLAAIAPPGLCHVFFTNSGSEAVDSAMKIVLAYHRLRGDGQRTRFIGREKAYHGVGF
GGMSIGGLPNNRKWFGPLLAGTDHLRHTLDIERNAYTRGLPAHGAELADDLERLITLHDASTIAAVFVEPVSGSAGVILP
PEGYLQRLRAICNRHGIVLVFDEVITGFGRVGDTFAAQRFSVTPDIITAAKGLTSGTVPMGAVLVADAIHDAFMHGPQSV
IELFHGYTYSGHPLACAAAIATLDTYAEEDLFTRAITRGAQWEDAVHSLRGLPHVIDIRNIGLIGAIELAPRDGAPGARG
YEIFERCFHEGGLLVRVTGDVIALSPPLIVTPEQIGQMVETLGNILRSTA
>Mature_449_residues
PDHLPRDAADALQAPAQLDAFWMPFTANRQFKARPRLLASAQGMYYRDVDGRQILDGTAGLWCCNAGHSRERIVAAIREQ
AGTLDFAPTFQMGSPLPFVLAQRLAAIAPPGLCHVFFTNSGSEAVDSAMKIVLAYHRLRGDGQRTRFIGREKAYHGVGFG
GMSIGGLPNNRKWFGPLLAGTDHLRHTLDIERNAYTRGLPAHGAELADDLERLITLHDASTIAAVFVEPVSGSAGVILPP
EGYLQRLRAICNRHGIVLVFDEVITGFGRVGDTFAAQRFSVTPDIITAAKGLTSGTVPMGAVLVADAIHDAFMHGPQSVI
ELFHGYTYSGHPLACAAAIATLDTYAEEDLFTRAITRGAQWEDAVHSLRGLPHVIDIRNIGLIGAIELAPRDGAPGARGY
EIFERCFHEGGLLVRVTGDVIALSPPLIVTPEQIGQMVETLGNILRSTA

Specific function: Catalyzes transamination between a variety of omega- amino acids, mono and diamines, and pyruvate. Plays a pivotal role in the metabolism of the omega amino acids [H]

COG id: COG0161

COG function: function code H; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI4557809, Length=421, Percent_Identity=29.2161520190024, Blast_Score=151, Evalue=1e-36,
Organism=Homo sapiens, GI37574042, Length=433, Percent_Identity=30.0230946882217, Blast_Score=136, Evalue=4e-32,
Organism=Homo sapiens, GI226442705, Length=433, Percent_Identity=30.0230946882217, Blast_Score=132, Evalue=7e-31,
Organism=Homo sapiens, GI284507298, Length=336, Percent_Identity=29.7619047619048, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI13994255, Length=436, Percent_Identity=27.5229357798165, Blast_Score=129, Evalue=6e-30,
Organism=Homo sapiens, GI226442709, Length=397, Percent_Identity=30.2267002518892, Blast_Score=125, Evalue=9e-29,
Organism=Homo sapiens, GI24119277, Length=431, Percent_Identity=26.2180974477958, Blast_Score=125, Evalue=1e-28,
Organism=Escherichia coli, GI145693181, Length=391, Percent_Identity=32.4808184143223, Blast_Score=193, Evalue=2e-50,
Organism=Escherichia coli, GI1786991, Length=434, Percent_Identity=31.1059907834101, Blast_Score=164, Evalue=7e-42,
Organism=Escherichia coli, GI1789759, Length=427, Percent_Identity=30.6791569086651, Blast_Score=152, Evalue=5e-38,
Organism=Escherichia coli, GI1789016, Length=408, Percent_Identity=31.1274509803922, Blast_Score=146, Evalue=3e-36,
Organism=Escherichia coli, GI1788044, Length=405, Percent_Identity=29.3827160493827, Blast_Score=144, Evalue=1e-35,
Organism=Escherichia coli, GI1787560, Length=438, Percent_Identity=29.6803652968037, Blast_Score=138, Evalue=7e-34,
Organism=Escherichia coli, GI1786349, Length=354, Percent_Identity=27.9661016949153, Blast_Score=91, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI25144271, Length=420, Percent_Identity=28.3333333333333, Blast_Score=154, Evalue=7e-38,
Organism=Caenorhabditis elegans, GI32564660, Length=434, Percent_Identity=27.1889400921659, Blast_Score=136, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI25144274, Length=296, Percent_Identity=30.0675675675676, Blast_Score=126, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI71992977, Length=441, Percent_Identity=26.984126984127, Blast_Score=123, Evalue=2e-28,
Organism=Saccharomyces cerevisiae, GI6323470, Length=437, Percent_Identity=27.2311212814645, Blast_Score=163, Evalue=5e-41,
Organism=Saccharomyces cerevisiae, GI6324386, Length=486, Percent_Identity=26.9547325102881, Blast_Score=138, Evalue=1e-33,
Organism=Saccharomyces cerevisiae, GI6324432, Length=420, Percent_Identity=25.4761904761905, Blast_Score=115, Evalue=1e-26,
Organism=Drosophila melanogaster, GI21357415, Length=422, Percent_Identity=27.0142180094787, Blast_Score=150, Evalue=2e-36,
Organism=Drosophila melanogaster, GI161085790, Length=440, Percent_Identity=29.7727272727273, Blast_Score=144, Evalue=2e-34,
Organism=Drosophila melanogaster, GI28574759, Length=429, Percent_Identity=29.6037296037296, Blast_Score=139, Evalue=5e-33,
Organism=Drosophila melanogaster, GI21356575, Length=421, Percent_Identity=28.2660332541568, Blast_Score=112, Evalue=5e-25,
Organism=Drosophila melanogaster, GI281366494, Length=370, Percent_Identity=23.5135135135135, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24667139, Length=370, Percent_Identity=23.5135135135135, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24667143, Length=370, Percent_Identity=23.5135135135135, Blast_Score=74, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005814
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00202 Aminotran_3 [H]

EC number: =2.6.1.18 [H]

Molecular weight: Translated: 48509; Mature: 48378

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: PS00600 AA_TRANSFER_CLASS_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDHLPRDAADALQAPAQLDAFWMPFTANRQFKARPRLLASAQGMYYRDVDGRQILDGTA
CCCCCCCCHHHHHCCCHHCCEEECCCCCCCCCCCCCHHHHHCCCCEEECCCCCEEECCCC
GLWCCNAGHSRERIVAAIREQAGTLDFAPTFQMGSPLPFVLAQRLAAIAPPGLCHVFFTN
CEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEC
SGSEAVDSAMKIVLAYHRLRGDGQRTRFIGREKAYHGVGFGGMSIGGLPNNRKWFGPLLA
CCHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHCCCCCCCCCCEECCCCCCCCCCCHHHH
GTDHLRHTLDIERNAYTRGLPAHGAELADDLERLITLHDASTIAAVFVEPVSGSAGVILP
CCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEEC
PEGYLQRLRAICNRHGIVLVFDEVITGFGRVGDTFAAQRFSVTPDIITAAKGLTSGTVPM
CHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHCCCCCCCCCH
GAVLVADAIHDAFMHGPQSVIELFHGYTYSGHPLACAAAIATLDTYAEEDLFTRAITRGA
HHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QWEDAVHSLRGLPHVIDIRNIGLIGAIELAPRDGAPGARGYEIFERCFHEGGLLVRVTGD
CHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECC
VIALSPPLIVTPEQIGQMVETLGNILRSTA
EEEECCCEEECHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PDHLPRDAADALQAPAQLDAFWMPFTANRQFKARPRLLASAQGMYYRDVDGRQILDGTA
CCCCCCCHHHHHCCCHHCCEEECCCCCCCCCCCCCHHHHHCCCCEEECCCCCEEECCCC
GLWCCNAGHSRERIVAAIREQAGTLDFAPTFQMGSPLPFVLAQRLAAIAPPGLCHVFFTN
CEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEC
SGSEAVDSAMKIVLAYHRLRGDGQRTRFIGREKAYHGVGFGGMSIGGLPNNRKWFGPLLA
CCHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHCCCCCCCCCCEECCCCCCCCCCCHHHH
GTDHLRHTLDIERNAYTRGLPAHGAELADDLERLITLHDASTIAAVFVEPVSGSAGVILP
CCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEEC
PEGYLQRLRAICNRHGIVLVFDEVITGFGRVGDTFAAQRFSVTPDIITAAKGLTSGTVPM
CHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHCCCCCCCCCH
GAVLVADAIHDAFMHGPQSVIELFHGYTYSGHPLACAAAIATLDTYAEEDLFTRAITRGA
HHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QWEDAVHSLRGLPHVIDIRNIGLIGAIELAPRDGAPGARGYEIFERCFHEGGLLVRVTGD
CHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECC
VIALSPPLIVTPEQIGQMVETLGNILRSTA
EEEECCCEEECHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1618757; 6822556; 2500426 [H]