| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is ygjG [C]
Identifier: 84624292
GI number: 84624292
Start: 2940772
End: 2942124
Strand: Direct
Name: ygjG [C]
Synonym: XOO_2635
Alternate gene names: 84624292
Gene position: 2940772-2942124 (Clockwise)
Preceding gene: 84624291
Following gene: 84624294
Centisome position: 59.53
GC content: 67.41
Gene sequence:
>1353_bases ATGCCCGACCACCTTCCCCGCGATGCGGCCGATGCGCTGCAGGCACCGGCGCAGCTGGATGCCTTCTGGATGCCATTCAC CGCCAATCGCCAGTTCAAGGCGCGCCCTCGCCTGCTGGCCTCGGCACAGGGCATGTATTACCGCGACGTCGATGGCCGCC AGATCCTGGACGGCACCGCCGGCCTGTGGTGCTGCAATGCCGGCCACAGCCGCGAGCGCATCGTGGCCGCGATCCGCGAA CAGGCCGGCACGCTGGATTTCGCGCCGACCTTCCAGATGGGTTCGCCGCTGCCGTTCGTGCTGGCGCAACGGCTGGCCGC AATCGCCCCACCCGGCCTGTGCCACGTGTTCTTCACCAACTCCGGCTCGGAAGCGGTGGATAGCGCGATGAAGATCGTGC TGGCCTATCACCGGCTGCGCGGCGACGGCCAGCGCACCCGCTTCATCGGCCGCGAGAAGGCATACCACGGGGTCGGCTTC GGCGGCATGTCCATCGGTGGGCTGCCCAATAACCGCAAATGGTTCGGCCCGTTGCTGGCCGGCACCGACCATCTGCGCCA CACGCTGGATATCGAACGCAATGCCTACACGCGCGGCCTGCCCGCGCATGGCGCGGAGCTGGCCGACGATCTGGAACGGC TGATCACCCTGCACGATGCGTCCACCATTGCCGCGGTTTTCGTCGAACCGGTGTCCGGTTCGGCCGGCGTGATACTGCCG CCTGAAGGTTACCTGCAGCGGTTACGCGCCATCTGCAACCGCCACGGCATCGTGCTGGTGTTCGACGAAGTGATCACCGG TTTCGGCCGCGTGGGCGATACGTTCGCCGCGCAGCGCTTCAGCGTCACTCCGGACATCATCACCGCTGCCAAGGGCCTGA CCAGCGGCACCGTGCCGATGGGCGCGGTGCTGGTGGCCGATGCCATCCACGACGCCTTCATGCACGGGCCGCAGAGCGTG ATCGAGCTCTTTCACGGCTACACCTATTCCGGCCATCCGCTGGCCTGCGCGGCCGCGATCGCCACGCTGGACACCTATGC AGAGGAAGACCTGTTCACGCGTGCGATCACGCGCGGCGCGCAGTGGGAGGACGCAGTGCACAGCCTGCGCGGGCTGCCGC ACGTCATCGATATCCGCAACATCGGCCTGATCGGGGCGATCGAGCTGGCGCCGCGCGACGGCGCCCCGGGTGCGCGCGGT TACGAGATCTTCGAGCGCTGTTTCCATGAAGGCGGCCTGCTGGTGCGCGTCACCGGCGATGTCATCGCACTGTCACCGCC ACTGATCGTCACGCCCGAGCAGATCGGGCAGATGGTGGAGACGCTGGGCAACATCCTGCGCAGCACTGCGTGA
Upstream 100 bases:
>100_bases CACGACGCGCCCCGCCAATGCGGTGCGACTGCCGGTATCGGGGTGACGGCCGACGCATCAGCTGCGTACAGTCGGGCGAT CCAAAGCGACGGAGCCTGCC
Downstream 100 bases:
>100_bases ATTGGTGACGGTCACCAGCAACGTCATTGCGAAGGCGTCTTGCCCTACACCATGCCGCAATCAAGCGGCATGTCGAGCAT GGAAGTCATTCAACATGGCG
Product: beta alanine--pyruvate transaminase
Products: NA
Alternate protein names: Omega-APT; Beta-alanine--pyruvate aminotransferase [H]
Number of amino acids: Translated: 450; Mature: 449
Protein sequence:
>450_residues MPDHLPRDAADALQAPAQLDAFWMPFTANRQFKARPRLLASAQGMYYRDVDGRQILDGTAGLWCCNAGHSRERIVAAIRE QAGTLDFAPTFQMGSPLPFVLAQRLAAIAPPGLCHVFFTNSGSEAVDSAMKIVLAYHRLRGDGQRTRFIGREKAYHGVGF GGMSIGGLPNNRKWFGPLLAGTDHLRHTLDIERNAYTRGLPAHGAELADDLERLITLHDASTIAAVFVEPVSGSAGVILP PEGYLQRLRAICNRHGIVLVFDEVITGFGRVGDTFAAQRFSVTPDIITAAKGLTSGTVPMGAVLVADAIHDAFMHGPQSV IELFHGYTYSGHPLACAAAIATLDTYAEEDLFTRAITRGAQWEDAVHSLRGLPHVIDIRNIGLIGAIELAPRDGAPGARG YEIFERCFHEGGLLVRVTGDVIALSPPLIVTPEQIGQMVETLGNILRSTA
Sequences:
>Translated_450_residues MPDHLPRDAADALQAPAQLDAFWMPFTANRQFKARPRLLASAQGMYYRDVDGRQILDGTAGLWCCNAGHSRERIVAAIRE QAGTLDFAPTFQMGSPLPFVLAQRLAAIAPPGLCHVFFTNSGSEAVDSAMKIVLAYHRLRGDGQRTRFIGREKAYHGVGF GGMSIGGLPNNRKWFGPLLAGTDHLRHTLDIERNAYTRGLPAHGAELADDLERLITLHDASTIAAVFVEPVSGSAGVILP PEGYLQRLRAICNRHGIVLVFDEVITGFGRVGDTFAAQRFSVTPDIITAAKGLTSGTVPMGAVLVADAIHDAFMHGPQSV IELFHGYTYSGHPLACAAAIATLDTYAEEDLFTRAITRGAQWEDAVHSLRGLPHVIDIRNIGLIGAIELAPRDGAPGARG YEIFERCFHEGGLLVRVTGDVIALSPPLIVTPEQIGQMVETLGNILRSTA >Mature_449_residues PDHLPRDAADALQAPAQLDAFWMPFTANRQFKARPRLLASAQGMYYRDVDGRQILDGTAGLWCCNAGHSRERIVAAIREQ AGTLDFAPTFQMGSPLPFVLAQRLAAIAPPGLCHVFFTNSGSEAVDSAMKIVLAYHRLRGDGQRTRFIGREKAYHGVGFG GMSIGGLPNNRKWFGPLLAGTDHLRHTLDIERNAYTRGLPAHGAELADDLERLITLHDASTIAAVFVEPVSGSAGVILPP EGYLQRLRAICNRHGIVLVFDEVITGFGRVGDTFAAQRFSVTPDIITAAKGLTSGTVPMGAVLVADAIHDAFMHGPQSVI ELFHGYTYSGHPLACAAAIATLDTYAEEDLFTRAITRGAQWEDAVHSLRGLPHVIDIRNIGLIGAIELAPRDGAPGARGY EIFERCFHEGGLLVRVTGDVIALSPPLIVTPEQIGQMVETLGNILRSTA
Specific function: Catalyzes transamination between a variety of omega- amino acids, mono and diamines, and pyruvate. Plays a pivotal role in the metabolism of the omega amino acids [H]
COG id: COG0161
COG function: function code H; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI4557809, Length=421, Percent_Identity=29.2161520190024, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI37574042, Length=433, Percent_Identity=30.0230946882217, Blast_Score=136, Evalue=4e-32, Organism=Homo sapiens, GI226442705, Length=433, Percent_Identity=30.0230946882217, Blast_Score=132, Evalue=7e-31, Organism=Homo sapiens, GI284507298, Length=336, Percent_Identity=29.7619047619048, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI13994255, Length=436, Percent_Identity=27.5229357798165, Blast_Score=129, Evalue=6e-30, Organism=Homo sapiens, GI226442709, Length=397, Percent_Identity=30.2267002518892, Blast_Score=125, Evalue=9e-29, Organism=Homo sapiens, GI24119277, Length=431, Percent_Identity=26.2180974477958, Blast_Score=125, Evalue=1e-28, Organism=Escherichia coli, GI145693181, Length=391, Percent_Identity=32.4808184143223, Blast_Score=193, Evalue=2e-50, Organism=Escherichia coli, GI1786991, Length=434, Percent_Identity=31.1059907834101, Blast_Score=164, Evalue=7e-42, Organism=Escherichia coli, GI1789759, Length=427, Percent_Identity=30.6791569086651, Blast_Score=152, Evalue=5e-38, Organism=Escherichia coli, GI1789016, Length=408, Percent_Identity=31.1274509803922, Blast_Score=146, Evalue=3e-36, Organism=Escherichia coli, GI1788044, Length=405, Percent_Identity=29.3827160493827, Blast_Score=144, Evalue=1e-35, Organism=Escherichia coli, GI1787560, Length=438, Percent_Identity=29.6803652968037, Blast_Score=138, Evalue=7e-34, Organism=Escherichia coli, GI1786349, Length=354, Percent_Identity=27.9661016949153, Blast_Score=91, Evalue=1e-19, Organism=Caenorhabditis elegans, GI25144271, Length=420, Percent_Identity=28.3333333333333, Blast_Score=154, Evalue=7e-38, Organism=Caenorhabditis elegans, GI32564660, Length=434, Percent_Identity=27.1889400921659, Blast_Score=136, Evalue=2e-32, Organism=Caenorhabditis elegans, GI25144274, Length=296, Percent_Identity=30.0675675675676, Blast_Score=126, Evalue=2e-29, Organism=Caenorhabditis elegans, GI71992977, Length=441, Percent_Identity=26.984126984127, Blast_Score=123, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6323470, Length=437, Percent_Identity=27.2311212814645, Blast_Score=163, Evalue=5e-41, Organism=Saccharomyces cerevisiae, GI6324386, Length=486, Percent_Identity=26.9547325102881, Blast_Score=138, Evalue=1e-33, Organism=Saccharomyces cerevisiae, GI6324432, Length=420, Percent_Identity=25.4761904761905, Blast_Score=115, Evalue=1e-26, Organism=Drosophila melanogaster, GI21357415, Length=422, Percent_Identity=27.0142180094787, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI161085790, Length=440, Percent_Identity=29.7727272727273, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI28574759, Length=429, Percent_Identity=29.6037296037296, Blast_Score=139, Evalue=5e-33, Organism=Drosophila melanogaster, GI21356575, Length=421, Percent_Identity=28.2660332541568, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI281366494, Length=370, Percent_Identity=23.5135135135135, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI24667139, Length=370, Percent_Identity=23.5135135135135, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI24667143, Length=370, Percent_Identity=23.5135135135135, Blast_Score=74, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005814 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00202 Aminotran_3 [H]
EC number: =2.6.1.18 [H]
Molecular weight: Translated: 48509; Mature: 48378
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: PS00600 AA_TRANSFER_CLASS_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDHLPRDAADALQAPAQLDAFWMPFTANRQFKARPRLLASAQGMYYRDVDGRQILDGTA CCCCCCCCHHHHHCCCHHCCEEECCCCCCCCCCCCCHHHHHCCCCEEECCCCCEEECCCC GLWCCNAGHSRERIVAAIREQAGTLDFAPTFQMGSPLPFVLAQRLAAIAPPGLCHVFFTN CEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEC SGSEAVDSAMKIVLAYHRLRGDGQRTRFIGREKAYHGVGFGGMSIGGLPNNRKWFGPLLA CCHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHCCCCCCCCCCEECCCCCCCCCCCHHHH GTDHLRHTLDIERNAYTRGLPAHGAELADDLERLITLHDASTIAAVFVEPVSGSAGVILP CCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEEC PEGYLQRLRAICNRHGIVLVFDEVITGFGRVGDTFAAQRFSVTPDIITAAKGLTSGTVPM CHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHCCCCCCCCCH GAVLVADAIHDAFMHGPQSVIELFHGYTYSGHPLACAAAIATLDTYAEEDLFTRAITRGA HHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC QWEDAVHSLRGLPHVIDIRNIGLIGAIELAPRDGAPGARGYEIFERCFHEGGLLVRVTGD CHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECC VIALSPPLIVTPEQIGQMVETLGNILRSTA EEEECCCEEECHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PDHLPRDAADALQAPAQLDAFWMPFTANRQFKARPRLLASAQGMYYRDVDGRQILDGTA CCCCCCCHHHHHCCCHHCCEEECCCCCCCCCCCCCHHHHHCCCCEEECCCCCEEECCCC GLWCCNAGHSRERIVAAIREQAGTLDFAPTFQMGSPLPFVLAQRLAAIAPPGLCHVFFTN CEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEC SGSEAVDSAMKIVLAYHRLRGDGQRTRFIGREKAYHGVGFGGMSIGGLPNNRKWFGPLLA CCHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHCCCCCCCCCCEECCCCCCCCCCCHHHH GTDHLRHTLDIERNAYTRGLPAHGAELADDLERLITLHDASTIAAVFVEPVSGSAGVILP CCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEEC PEGYLQRLRAICNRHGIVLVFDEVITGFGRVGDTFAAQRFSVTPDIITAAKGLTSGTVPM CHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHCCCCCCCCCH GAVLVADAIHDAFMHGPQSVIELFHGYTYSGHPLACAAAIATLDTYAEEDLFTRAITRGA HHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC QWEDAVHSLRGLPHVIDIRNIGLIGAIELAPRDGAPGARGYEIFERCFHEGGLLVRVTGD CHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECC VIALSPPLIVTPEQIGQMVETLGNILRSTA EEEECCCEEECHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1618757; 6822556; 2500426 [H]