BacMap

Definition	Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession	NC_007705
Length	4,940,217

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The map label for this gene is dbpA [H]

Identifier: 84624218

GI number: 84624218

Start: 2854398

End: 2855774

Strand: Direct

Name: dbpA [H]

Synonym: XOO_2561

Alternate gene names: 84624218

Gene position: 2854398-2855774 (Clockwise)

Preceding gene: 84624216

Following gene: 84624221

Centisome position: 57.78

GC content: 67.18

Gene sequence:

>1377_bases
ATGAACGAATTCTCCGCGCTGCCGCTGTCGCCGGCCCTGGCCCCCGGCATCGACGCCCTGGGCTACACCGTCCTGACTCC
CGTCCAGGCGCAGAGCCTGCCGCCGATCCTGCGGGGGCTCGATGTCATCGCGCAGGCGCCGACCGGCAGCGGCAAGACTG
CCGCGTTCGGGCTTGGCCTGCTGCAAAAGCTCGACCCCGCACTGACCCGCGCGCAAGCGCTGGTGCTCTGCCCCACCCGC
GAGCTGGCCGATCAGGTCGGCAAGCAACTGCGCAAACTCGCCACTGGCATCCCCAACATGAAATTGGTGGTACTCACCGG
CGGCATGCCGCTGGGCCCACAGCTGGCCTCGCTGGAAGCGCACGACCCGCACGTGGTGGTCGGTACGCCCGGGCGCATCC
AGGAGCTGGCGCGCAAACGCGCCCTGCATCTGGGCGGCGTGCGCACCCTGGTGCTGGACGAGGCCGACCGCATGCTCGAC
ATGGGCTTCGAAGAACCCATCCGCGAGATTGCCAGCCGCTGCGACAAACACCGCCAGAGCCTGCTGTTTTCGGCCACGTT
CCCCGACATCATCCGCACCCTGGCGCGCGAGATCCTGAAAGACCCGATTGAAATCACCGTCGAAGGCGCCGACAACGCGC
CGGAAATCGATCAGCAGTTCTTCGAGGTCGATCCCACCTATCGGCAGAAAGCGGTAGCCGGCTTGCTGCTGCGCTTCACC
CCCGAATCCAGCGTGGTGTTCTGCAATACCCGCAAGGAAGTGGATGAAGTGGCCGGCTCGCTGCAGGAGTTCGGCTTCTC
CGCGCTAGCCCTGCACGGCGACATGGAGCAGCGCGACCGCGATGAGGTGCTGGTGCGTTTCGTCAACCGCAGCTGCAACG
TGTTGGTGGCCAGCGACGTGGCAGCACGCGGATTGGACGTGGAAGACCTCTCGGCCGTGGTCAATTACGAGCTGCCCACC
GATACCGAAACCTACCGCCATCGCATCGGCCGCACCGCGCGTGCAGGCAAGCACGGGCTGGCATTAAGCCTGGTCGCCCC
GCGTGAAACCGCGCGCGCCCAAGCGCTGGAAGCCGAACAAGGCCAGCCCTTGAAGTGGTCGCGTGCACCACTGGCCACCG
CACGCCCCGCGCAGCTGCCGCAGGCGGCAATGACCACCTTGCGCATCGACGGCGGCAAGACCGACAAGCTGCGTGCCGGC
GACATCCTCGGTGCATTGACCGGCGAAGCCGGACTCTCGGGCGCGGCGATCGGCAAGATCGCCATCTACCCCACCCGCTC
CTACGTCGCCATCGCGCGCGCGCAGGTCGCCAAGGCGCTGGCACATCTGCACGCCGGCAAGATCAAGGGGCGCCGGTTCC
GGGTCAGCAAGCTCTGA

Upstream 100 bases:

>100_bases
ATTAAAGGCATGCCGCAATTGTACGGGATTGGGGATTGGCAAGAGCACAGGCTGTTGCAGTGACGAATCCCGAATTCCGA
ATCCCGGGCTAAAATGCGCC

Downstream 100 bases:

>100_bases
ATACGACGCGGCCGGCGTCATGCCGGCCGCGTGTTTTCTCAGTCACGGCAAACCTGGATGCGCACACTTCCATGCAGCCA
GGGTCGCCGCAGAACACGCG

Product: ATP-dependent RNA helicase DbpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MNEFSALPLSPALAPGIDALGYTVLTPVQAQSLPPILRGLDVIAQAPTGSGKTAAFGLGLLQKLDPALTRAQALVLCPTR
ELADQVGKQLRKLATGIPNMKLVVLTGGMPLGPQLASLEAHDPHVVVGTPGRIQELARKRALHLGGVRTLVLDEADRMLD
MGFEEPIREIASRCDKHRQSLLFSATFPDIIRTLAREILKDPIEITVEGADNAPEIDQQFFEVDPTYRQKAVAGLLLRFT
PESSVVFCNTRKEVDEVAGSLQEFGFSALALHGDMEQRDRDEVLVRFVNRSCNVLVASDVAARGLDVEDLSAVVNYELPT
DTETYRHRIGRTARAGKHGLALSLVAPRETARAQALEAEQGQPLKWSRAPLATARPAQLPQAAMTTLRIDGGKTDKLRAG
DILGALTGEAGLSGAAIGKIAIYPTRSYVAIARAQVAKALAHLHAGKIKGRRFRVSKL

Sequences:

>Translated_458_residues
MNEFSALPLSPALAPGIDALGYTVLTPVQAQSLPPILRGLDVIAQAPTGSGKTAAFGLGLLQKLDPALTRAQALVLCPTR
ELADQVGKQLRKLATGIPNMKLVVLTGGMPLGPQLASLEAHDPHVVVGTPGRIQELARKRALHLGGVRTLVLDEADRMLD
MGFEEPIREIASRCDKHRQSLLFSATFPDIIRTLAREILKDPIEITVEGADNAPEIDQQFFEVDPTYRQKAVAGLLLRFT
PESSVVFCNTRKEVDEVAGSLQEFGFSALALHGDMEQRDRDEVLVRFVNRSCNVLVASDVAARGLDVEDLSAVVNYELPT
DTETYRHRIGRTARAGKHGLALSLVAPRETARAQALEAEQGQPLKWSRAPLATARPAQLPQAAMTTLRIDGGKTDKLRAG
DILGALTGEAGLSGAAIGKIAIYPTRSYVAIARAQVAKALAHLHAGKIKGRRFRVSKL
>Mature_458_residues
MNEFSALPLSPALAPGIDALGYTVLTPVQAQSLPPILRGLDVIAQAPTGSGKTAAFGLGLLQKLDPALTRAQALVLCPTR
ELADQVGKQLRKLATGIPNMKLVVLTGGMPLGPQLASLEAHDPHVVVGTPGRIQELARKRALHLGGVRTLVLDEADRMLD
MGFEEPIREIASRCDKHRQSLLFSATFPDIIRTLAREILKDPIEITVEGADNAPEIDQQFFEVDPTYRQKAVAGLLLRFT
PESSVVFCNTRKEVDEVAGSLQEFGFSALALHGDMEQRDRDEVLVRFVNRSCNVLVASDVAARGLDVEDLSAVVNYELPT
DTETYRHRIGRTARAGKHGLALSLVAPRETARAQALEAEQGQPLKWSRAPLATARPAQLPQAAMTTLRIDGGKTDKLRAG
DILGALTGEAGLSGAAIGKIAIYPTRSYVAIARAQVAKALAHLHAGKIKGRRFRVSKL

Specific function: Has a helix-destabilizing activity, which is not coupled to the ATPase activity. Can unwind the 23S rRNA as well as 16S rRNA. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. Could play a major role in ribosome ass

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI7661920, Length=344, Percent_Identity=37.5, Blast_Score=240, Evalue=2e-63,
Organism=Homo sapiens, GI224593278, Length=415, Percent_Identity=38.0722891566265, Blast_Score=238, Evalue=1e-62,
Organism=Homo sapiens, GI20149629, Length=407, Percent_Identity=35.6265356265356, Blast_Score=234, Evalue=1e-61,
Organism=Homo sapiens, GI45446747, Length=390, Percent_Identity=38.974358974359, Blast_Score=233, Evalue=3e-61,
Organism=Homo sapiens, GI45446743, Length=390, Percent_Identity=38.974358974359, Blast_Score=233, Evalue=3e-61,
Organism=Homo sapiens, GI83700235, Length=351, Percent_Identity=37.037037037037, Blast_Score=227, Evalue=2e-59,
Organism=Homo sapiens, GI4503529, Length=360, Percent_Identity=35.5555555555556, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI164664518, Length=364, Percent_Identity=33.5164835164835, Blast_Score=223, Evalue=2e-58,
Organism=Homo sapiens, GI262118318, Length=357, Percent_Identity=37.8151260504202, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI216548263, Length=358, Percent_Identity=37.7094972067039, Blast_Score=219, Evalue=3e-57,
Organism=Homo sapiens, GI262231852, Length=358, Percent_Identity=37.7094972067039, Blast_Score=219, Evalue=3e-57,
Organism=Homo sapiens, GI13518015, Length=358, Percent_Identity=37.7094972067039, Blast_Score=219, Evalue=4e-57,
Organism=Homo sapiens, GI4758112, Length=352, Percent_Identity=33.2386363636364, Blast_Score=217, Evalue=2e-56,
Organism=Homo sapiens, GI18375623, Length=352, Percent_Identity=33.2386363636364, Blast_Score=217, Evalue=2e-56,
Organism=Homo sapiens, GI4758138, Length=346, Percent_Identity=37.5722543352601, Blast_Score=216, Evalue=3e-56,
Organism=Homo sapiens, GI21040371, Length=352, Percent_Identity=32.9545454545455, Blast_Score=214, Evalue=2e-55,
Organism=Homo sapiens, GI148613856, Length=345, Percent_Identity=36.8115942028986, Blast_Score=213, Evalue=3e-55,
Organism=Homo sapiens, GI38201710, Length=345, Percent_Identity=36.8115942028986, Blast_Score=213, Evalue=3e-55,
Organism=Homo sapiens, GI41327773, Length=335, Percent_Identity=37.6119402985075, Blast_Score=210, Evalue=3e-54,
Organism=Homo sapiens, GI301171467, Length=373, Percent_Identity=37.8016085790885, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI31542656, Length=374, Percent_Identity=36.3636363636364, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI87196351, Length=373, Percent_Identity=37.8016085790885, Blast_Score=209, Evalue=5e-54,
Organism=Homo sapiens, GI301171475, Length=373, Percent_Identity=37.8016085790885, Blast_Score=209, Evalue=6e-54,
Organism=Homo sapiens, GI188035877, Length=349, Percent_Identity=35.5300859598854, Blast_Score=209, Evalue=6e-54,
Organism=Homo sapiens, GI21071032, Length=384, Percent_Identity=36.1979166666667, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI169881239, Length=373, Percent_Identity=37.2654155495979, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI13514809, Length=373, Percent_Identity=37.2654155495979, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI50659095, Length=388, Percent_Identity=34.2783505154639, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI164419743, Length=355, Percent_Identity=36.9014084507042, Blast_Score=201, Evalue=9e-52,
Organism=Homo sapiens, GI51094101, Length=355, Percent_Identity=36.9014084507042, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI41327771, Length=383, Percent_Identity=34.2036553524804, Blast_Score=199, Evalue=4e-51,
Organism=Homo sapiens, GI13129006, Length=384, Percent_Identity=33.3333333333333, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI222352149, Length=347, Percent_Identity=34.8703170028818, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI6005743, Length=361, Percent_Identity=34.0720221606648, Blast_Score=192, Evalue=4e-49,
Organism=Homo sapiens, GI55749865, Length=360, Percent_Identity=31.3888888888889, Blast_Score=192, Evalue=5e-49,
Organism=Homo sapiens, GI41327779, Length=391, Percent_Identity=32.2250639386189, Blast_Score=192, Evalue=5e-49,
Organism=Homo sapiens, GI8922886, Length=361, Percent_Identity=33.7950138504155, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI256223453, Length=354, Percent_Identity=31.9209039548023, Blast_Score=189, Evalue=4e-48,
Organism=Homo sapiens, GI41327776, Length=406, Percent_Identity=33.0049261083744, Blast_Score=188, Evalue=8e-48,
Organism=Homo sapiens, GI13514831, Length=367, Percent_Identity=35.6948228882834, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI62241022, Length=345, Percent_Identity=33.6231884057971, Blast_Score=181, Evalue=2e-45,
Organism=Homo sapiens, GI62241024, Length=322, Percent_Identity=34.472049689441, Blast_Score=177, Evalue=3e-44,
Organism=Homo sapiens, GI17505907, Length=422, Percent_Identity=32.2274881516588, Blast_Score=166, Evalue=6e-41,
Organism=Homo sapiens, GI164419732, Length=348, Percent_Identity=31.3218390804598, Blast_Score=164, Evalue=1e-40,
Organism=Homo sapiens, GI38327634, Length=375, Percent_Identity=33.3333333333333, Blast_Score=162, Evalue=8e-40,
Organism=Homo sapiens, GI9506931, Length=386, Percent_Identity=30.8290155440415, Blast_Score=152, Evalue=5e-37,
Organism=Homo sapiens, GI38569503, Length=334, Percent_Identity=30.2395209580838, Blast_Score=151, Evalue=1e-36,
Organism=Homo sapiens, GI38569505, Length=334, Percent_Identity=30.2395209580838, Blast_Score=150, Evalue=2e-36,
Organism=Homo sapiens, GI9966805, Length=313, Percent_Identity=33.5463258785943, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI4826686, Length=334, Percent_Identity=29.0419161676647, Blast_Score=133, Evalue=4e-31,
Organism=Homo sapiens, GI154759257, Length=424, Percent_Identity=28.3018867924528, Blast_Score=115, Evalue=8e-26,
Organism=Homo sapiens, GI256773275, Length=392, Percent_Identity=29.5918367346939, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI20336298, Length=240, Percent_Identity=35.8333333333333, Blast_Score=109, Evalue=6e-24,
Organism=Homo sapiens, GI4557365, Length=97, Percent_Identity=34.020618556701, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI1787605, Length=456, Percent_Identity=52.1929824561403, Blast_Score=442, Evalue=1e-125,
Organism=Escherichia coli, GI87082221, Length=347, Percent_Identity=42.0749279538905, Blast_Score=262, Evalue=3e-71,
Organism=Escherichia coli, GI1787016, Length=356, Percent_Identity=41.5730337078652, Blast_Score=248, Evalue=5e-67,
Organism=Escherichia coli, GI1788930, Length=333, Percent_Identity=41.4414414414414, Blast_Score=211, Evalue=7e-56,
Organism=Escherichia coli, GI1790214, Length=376, Percent_Identity=34.8404255319149, Blast_Score=202, Evalue=4e-53,
Organism=Escherichia coli, GI48994977, Length=375, Percent_Identity=25.0666666666667, Blast_Score=75, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI71995724, Length=344, Percent_Identity=40.6976744186046, Blast_Score=251, Evalue=7e-67,
Organism=Caenorhabditis elegans, GI17507121, Length=344, Percent_Identity=40.6976744186046, Blast_Score=251, Evalue=8e-67,
Organism=Caenorhabditis elegans, GI71987143, Length=358, Percent_Identity=35.7541899441341, Blast_Score=234, Evalue=9e-62,
Organism=Caenorhabditis elegans, GI17555296, Length=366, Percent_Identity=37.1584699453552, Blast_Score=233, Evalue=1e-61,
Organism=Caenorhabditis elegans, GI17510307, Length=367, Percent_Identity=37.0572207084469, Blast_Score=216, Evalue=2e-56,
Organism=Caenorhabditis elegans, GI17552114, Length=357, Percent_Identity=33.0532212885154, Blast_Score=216, Evalue=3e-56,
Organism=Caenorhabditis elegans, GI17510309, Length=365, Percent_Identity=37.2602739726027, Blast_Score=215, Evalue=3e-56,
Organism=Caenorhabditis elegans, GI71995514, Length=367, Percent_Identity=37.0572207084469, Blast_Score=214, Evalue=5e-56,
Organism=Caenorhabditis elegans, GI71982858, Length=353, Percent_Identity=32.2946175637394, Blast_Score=212, Evalue=3e-55,
Organism=Caenorhabditis elegans, GI86570094, Length=337, Percent_Identity=38.8724035608309, Blast_Score=209, Evalue=3e-54,
Organism=Caenorhabditis elegans, GI17510559, Length=380, Percent_Identity=36.0526315789474, Blast_Score=205, Evalue=5e-53,
Organism=Caenorhabditis elegans, GI17552642, Length=357, Percent_Identity=36.4145658263305, Blast_Score=202, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI115533224, Length=380, Percent_Identity=36.5789473684211, Blast_Score=202, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI115532546, Length=385, Percent_Identity=34.8051948051948, Blast_Score=201, Evalue=5e-52,
Organism=Caenorhabditis elegans, GI71999646, Length=368, Percent_Identity=33.4239130434783, Blast_Score=200, Evalue=1e-51,
Organism=Caenorhabditis elegans, GI71999644, Length=368, Percent_Identity=33.4239130434783, Blast_Score=199, Evalue=3e-51,
Organism=Caenorhabditis elegans, GI115532548, Length=374, Percent_Identity=35.2941176470588, Blast_Score=199, Evalue=3e-51,
Organism=Caenorhabditis elegans, GI32565321, Length=371, Percent_Identity=35.5795148247978, Blast_Score=198, Evalue=4e-51,
Organism=Caenorhabditis elegans, GI17507945, Length=362, Percent_Identity=35.6353591160221, Blast_Score=198, Evalue=6e-51,
Organism=Caenorhabditis elegans, GI71995718, Length=390, Percent_Identity=35.8974358974359, Blast_Score=197, Evalue=9e-51,
Organism=Caenorhabditis elegans, GI17507877, Length=372, Percent_Identity=36.0215053763441, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI17507879, Length=372, Percent_Identity=36.0215053763441, Blast_Score=191, Evalue=8e-49,
Organism=Caenorhabditis elegans, GI17507881, Length=373, Percent_Identity=34.5844504021448, Blast_Score=182, Evalue=4e-46,
Organism=Caenorhabditis elegans, GI17536099, Length=381, Percent_Identity=32.2834645669291, Blast_Score=181, Evalue=7e-46,
Organism=Caenorhabditis elegans, GI17536101, Length=381, Percent_Identity=32.2834645669291, Blast_Score=181, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI17537549, Length=355, Percent_Identity=33.5211267605634, Blast_Score=180, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI17536103, Length=376, Percent_Identity=32.7127659574468, Blast_Score=178, Evalue=7e-45,
Organism=Caenorhabditis elegans, GI193206561, Length=321, Percent_Identity=32.0872274143302, Blast_Score=167, Evalue=7e-42,
Organism=Caenorhabditis elegans, GI17509811, Length=363, Percent_Identity=31.9559228650138, Blast_Score=164, Evalue=8e-41,
Organism=Caenorhabditis elegans, GI17505370, Length=364, Percent_Identity=33.2417582417582, Blast_Score=158, Evalue=6e-39,
Organism=Caenorhabditis elegans, GI17553716, Length=354, Percent_Identity=27.4011299435028, Blast_Score=150, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI193208216, Length=377, Percent_Identity=30.2387267904509, Blast_Score=150, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI17556951, Length=397, Percent_Identity=29.2191435768262, Blast_Score=149, Evalue=3e-36,
Organism=Caenorhabditis elegans, GI25148203, Length=412, Percent_Identity=27.9126213592233, Blast_Score=145, Evalue=6e-35,
Organism=Caenorhabditis elegans, GI71990816, Length=350, Percent_Identity=32.2857142857143, Blast_Score=140, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI71982862, Length=199, Percent_Identity=35.678391959799, Blast_Score=137, Evalue=9e-33,
Organism=Caenorhabditis elegans, GI17507641, Length=395, Percent_Identity=28.8607594936709, Blast_Score=135, Evalue=6e-32,
Organism=Caenorhabditis elegans, GI32564046, Length=372, Percent_Identity=29.3010752688172, Blast_Score=130, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17508543, Length=368, Percent_Identity=29.3478260869565, Blast_Score=126, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI25148205, Length=337, Percent_Identity=27.893175074184, Blast_Score=121, Evalue=9e-28,
Organism=Caenorhabditis elegans, GI71997889, Length=360, Percent_Identity=28.0555555555556, Blast_Score=115, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI25148291, Length=333, Percent_Identity=27.9279279279279, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI71987152, Length=98, Percent_Identity=39.7959183673469, Blast_Score=92, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI25145561, Length=355, Percent_Identity=23.6619718309859, Blast_Score=66, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6320224, Length=358, Percent_Identity=36.5921787709497, Blast_Score=249, Evalue=8e-67,
Organism=Saccharomyces cerevisiae, GI6325138, Length=386, Percent_Identity=38.3419689119171, Blast_Score=229, Evalue=6e-61,
Organism=Saccharomyces cerevisiae, GI6324778, Length=388, Percent_Identity=37.8865979381443, Blast_Score=224, Evalue=3e-59,
Organism=Saccharomyces cerevisiae, GI6320041, Length=362, Percent_Identity=34.2541436464088, Blast_Score=217, Evalue=3e-57,
Organism=Saccharomyces cerevisiae, GI6321360, Length=342, Percent_Identity=38.5964912280702, Blast_Score=216, Evalue=8e-57,
Organism=Saccharomyces cerevisiae, GI6324217, Length=370, Percent_Identity=36.7567567567568, Blast_Score=212, Evalue=1e-55,
Organism=Saccharomyces cerevisiae, GI6321856, Length=346, Percent_Identity=36.9942196531792, Blast_Score=211, Evalue=2e-55,
Organism=Saccharomyces cerevisiae, GI6320119, Length=351, Percent_Identity=31.9088319088319, Blast_Score=206, Evalue=6e-54,
Organism=Saccharomyces cerevisiae, GI6322912, Length=357, Percent_Identity=33.3333333333333, Blast_Score=202, Evalue=1e-52,
Organism=Saccharomyces cerevisiae, GI6322323, Length=357, Percent_Identity=33.3333333333333, Blast_Score=202, Evalue=1e-52,
Organism=Saccharomyces cerevisiae, GI6323021, Length=383, Percent_Identity=34.9869451697128, Blast_Score=201, Evalue=2e-52,
Organism=Saccharomyces cerevisiae, GI6324620, Length=363, Percent_Identity=33.8842975206612, Blast_Score=188, Evalue=2e-48,
Organism=Saccharomyces cerevisiae, GI6321963, Length=373, Percent_Identity=34.3163538873995, Blast_Score=183, Evalue=5e-47,
Organism=Saccharomyces cerevisiae, GI6320173, Length=405, Percent_Identity=31.6049382716049, Blast_Score=183, Evalue=6e-47,
Organism=Saccharomyces cerevisiae, GI6322427, Length=366, Percent_Identity=36.0655737704918, Blast_Score=181, Evalue=2e-46,
Organism=Saccharomyces cerevisiae, GI6319618, Length=457, Percent_Identity=30.8533916849015, Blast_Score=180, Evalue=5e-46,
Organism=Saccharomyces cerevisiae, GI6323947, Length=375, Percent_Identity=32.5333333333333, Blast_Score=169, Evalue=6e-43,
Organism=Saccharomyces cerevisiae, GI6321111, Length=363, Percent_Identity=29.4765840220386, Blast_Score=169, Evalue=8e-43,
Organism=Saccharomyces cerevisiae, GI6320449, Length=359, Percent_Identity=31.4763231197772, Blast_Score=166, Evalue=7e-42,
Organism=Saccharomyces cerevisiae, GI6319714, Length=370, Percent_Identity=30.8108108108108, Blast_Score=159, Evalue=1e-39,
Organism=Saccharomyces cerevisiae, GI6320400, Length=385, Percent_Identity=30.3896103896104, Blast_Score=150, Evalue=5e-37,
Organism=Saccharomyces cerevisiae, GI6321267, Length=321, Percent_Identity=28.6604361370716, Blast_Score=132, Evalue=1e-31,
Organism=Saccharomyces cerevisiae, GI6323306, Length=416, Percent_Identity=23.7980769230769, Blast_Score=125, Evalue=2e-29,
Organism=Saccharomyces cerevisiae, GI6324366, Length=352, Percent_Identity=25.5681818181818, Blast_Score=115, Evalue=1e-26,
Organism=Saccharomyces cerevisiae, GI6322876, Length=183, Percent_Identity=30.0546448087432, Blast_Score=70, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24645031, Length=345, Percent_Identity=39.4202898550725, Blast_Score=252, Evalue=5e-67,
Organism=Drosophila melanogaster, GI24585582, Length=363, Percent_Identity=37.465564738292, Blast_Score=236, Evalue=2e-62,
Organism=Drosophila melanogaster, GI24662330, Length=337, Percent_Identity=40.9495548961424, Blast_Score=228, Evalue=5e-60,
Organism=Drosophila melanogaster, GI24584399, Length=363, Percent_Identity=37.465564738292, Blast_Score=221, Evalue=1e-57,
Organism=Drosophila melanogaster, GI24642151, Length=344, Percent_Identity=37.7906976744186, Blast_Score=216, Evalue=3e-56,
Organism=Drosophila melanogaster, GI24583281, Length=364, Percent_Identity=32.967032967033, Blast_Score=215, Evalue=5e-56,
Organism=Drosophila melanogaster, GI21355075, Length=368, Percent_Identity=35.5978260869565, Blast_Score=215, Evalue=5e-56,
Organism=Drosophila melanogaster, GI24583279, Length=364, Percent_Identity=32.967032967033, Blast_Score=215, Evalue=5e-56,
Organism=Drosophila melanogaster, GI28575014, Length=354, Percent_Identity=37.5706214689266, Blast_Score=215, Evalue=6e-56,
Organism=Drosophila melanogaster, GI21356161, Length=360, Percent_Identity=37.7777777777778, Blast_Score=214, Evalue=7e-56,
Organism=Drosophila melanogaster, GI24582080, Length=347, Percent_Identity=35.7348703170029, Blast_Score=214, Evalue=8e-56,
Organism=Drosophila melanogaster, GI24582078, Length=347, Percent_Identity=35.7348703170029, Blast_Score=214, Evalue=8e-56,
Organism=Drosophila melanogaster, GI17136248, Length=347, Percent_Identity=35.7348703170029, Blast_Score=214, Evalue=8e-56,
Organism=Drosophila melanogaster, GI24582075, Length=347, Percent_Identity=35.7348703170029, Blast_Score=214, Evalue=8e-56,
Organism=Drosophila melanogaster, GI28574962, Length=346, Percent_Identity=38.150289017341, Blast_Score=212, Evalue=4e-55,
Organism=Drosophila melanogaster, GI17977678, Length=358, Percent_Identity=37.1508379888268, Blast_Score=209, Evalue=3e-54,
Organism=Drosophila melanogaster, GI18857967, Length=355, Percent_Identity=36.6197183098592, Blast_Score=209, Evalue=4e-54,
Organism=Drosophila melanogaster, GI17985987, Length=373, Percent_Identity=36.7292225201072, Blast_Score=205, Evalue=5e-53,
Organism=Drosophila melanogaster, GI24644487, Length=371, Percent_Identity=35.5795148247978, Blast_Score=203, Evalue=2e-52,
Organism=Drosophila melanogaster, GI45551833, Length=371, Percent_Identity=35.5795148247978, Blast_Score=203, Evalue=2e-52,
Organism=Drosophila melanogaster, GI24644485, Length=371, Percent_Identity=35.5795148247978, Blast_Score=203, Evalue=2e-52,
Organism=Drosophila melanogaster, GI24644483, Length=371, Percent_Identity=35.5795148247978, Blast_Score=203, Evalue=2e-52,
Organism=Drosophila melanogaster, GI281361218, Length=371, Percent_Identity=35.5795148247978, Blast_Score=203, Evalue=2e-52,
Organism=Drosophila melanogaster, GI24644481, Length=371, Percent_Identity=35.5795148247978, Blast_Score=203, Evalue=2e-52,
Organism=Drosophila melanogaster, GI24644479, Length=371, Percent_Identity=35.5795148247978, Blast_Score=202, Evalue=3e-52,
Organism=Drosophila melanogaster, GI24581954, Length=353, Percent_Identity=32.2946175637394, Blast_Score=199, Evalue=4e-51,
Organism=Drosophila melanogaster, GI24581952, Length=353, Percent_Identity=32.2946175637394, Blast_Score=199, Evalue=4e-51,
Organism=Drosophila melanogaster, GI24581956, Length=353, Percent_Identity=32.2946175637394, Blast_Score=199, Evalue=4e-51,
Organism=Drosophila melanogaster, GI24584994, Length=370, Percent_Identity=33.2432432432432, Blast_Score=194, Evalue=8e-50,
Organism=Drosophila melanogaster, GI17136814, Length=367, Percent_Identity=35.6948228882834, Blast_Score=192, Evalue=5e-49,
Organism=Drosophila melanogaster, GI21355559, Length=377, Percent_Identity=33.42175066313, Blast_Score=171, Evalue=1e-42,
Organism=Drosophila melanogaster, GI281365720, Length=295, Percent_Identity=37.6271186440678, Blast_Score=167, Evalue=2e-41,
Organism=Drosophila melanogaster, GI28571808, Length=364, Percent_Identity=31.5934065934066, Blast_Score=158, Evalue=6e-39,
Organism=Drosophila melanogaster, GI28571809, Length=364, Percent_Identity=31.5934065934066, Blast_Score=158, Evalue=6e-39,
Organism=Drosophila melanogaster, GI17647335, Length=361, Percent_Identity=27.4238227146814, Blast_Score=155, Evalue=6e-38,
Organism=Drosophila melanogaster, GI24642822, Length=376, Percent_Identity=31.1170212765957, Blast_Score=149, Evalue=3e-36,
Organism=Drosophila melanogaster, GI18859659, Length=448, Percent_Identity=29.9107142857143, Blast_Score=145, Evalue=5e-35,
Organism=Drosophila melanogaster, GI28571338, Length=448, Percent_Identity=29.9107142857143, Blast_Score=145, Evalue=5e-35,
Organism=Drosophila melanogaster, GI24668515, Length=333, Percent_Identity=30.9309309309309, Blast_Score=141, Evalue=9e-34,
Organism=Drosophila melanogaster, GI24643725, Length=393, Percent_Identity=26.972010178117, Blast_Score=138, Evalue=6e-33,
Organism=Drosophila melanogaster, GI24666101, Length=358, Percent_Identity=29.8882681564246, Blast_Score=138, Evalue=7e-33,
Organism=Drosophila melanogaster, GI20130173, Length=315, Percent_Identity=33.3333333333333, Blast_Score=133, Evalue=2e-31,
Organism=Drosophila melanogaster, GI19920478, Length=377, Percent_Identity=29.7082228116711, Blast_Score=128, Evalue=1e-29,
Organism=Drosophila melanogaster, GI17136666, Length=401, Percent_Identity=27.930174563591, Blast_Score=123, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24640164, Length=331, Percent_Identity=22.9607250755287, Blast_Score=76, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005580
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 49295; Mature: 49295

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEFSALPLSPALAPGIDALGYTVLTPVQAQSLPPILRGLDVIAQAPTGSGKTAAFGLGL
CCCCCCCCCCCCCCCCCHHCCHHHCCCCCHHCCCHHHHHHHHHEECCCCCCCHHHHHHHH
LQKLDPALTRAQALVLCPTRELADQVGKQLRKLATGIPNMKLVVLTGGMPLGPQLASLEA
HHHHCHHHHHCCEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCC
HDPHVVVGTPGRIQELARKRALHLGGVRTLVLDEADRMLDMGFEEPIREIASRCDKHRQS
CCCEEEECCCHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LLFSATFPDIIRTLAREILKDPIEITVEGADNAPEIDQQFFEVDPTYRQKAVAGLLLRFT
EEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHEEEC
PESSVVFCNTRKEVDEVAGSLQEFGFSALALHGDMEQRDRDEVLVRFVNRSCNVLVASDV
CCCCEEEECCHHHHHHHHHHHHHCCCEEEEEECCHHHCCHHHHHHHHHCCCCCEEEECCH
AARGLDVEDLSAVVNYELPTDTETYRHRIGRTARAGKHGLALSLVAPRETARAQALEAEQ
HHCCCCHHHHHHHHCCCCCCCCHHHHHHHCCHHCCCCCCEEEEEECCCHHHHHHHHHCCC
GQPLKWSRAPLATARPAQLPQAAMTTLRIDGGKTDKLRAGDILGALTGEAGLSGAAIGKI
CCCCCCCCCCCCCCCCCCCCHHHHHEEEECCCCCCCEECCCHHHHHCCCCCCCCCEECEE
AIYPTRSYVAIARAQVAKALAHLHAGKIKGRRFRVSKL
EEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
>Mature Secondary Structure
MNEFSALPLSPALAPGIDALGYTVLTPVQAQSLPPILRGLDVIAQAPTGSGKTAAFGLGL
CCCCCCCCCCCCCCCCCHHCCHHHCCCCCHHCCCHHHHHHHHHEECCCCCCCHHHHHHHH
LQKLDPALTRAQALVLCPTRELADQVGKQLRKLATGIPNMKLVVLTGGMPLGPQLASLEA
HHHHCHHHHHCCEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCC
HDPHVVVGTPGRIQELARKRALHLGGVRTLVLDEADRMLDMGFEEPIREIASRCDKHRQS
CCCEEEECCCHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LLFSATFPDIIRTLAREILKDPIEITVEGADNAPEIDQQFFEVDPTYRQKAVAGLLLRFT
EEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHEEEC
PESSVVFCNTRKEVDEVAGSLQEFGFSALALHGDMEQRDRDEVLVRFVNRSCNVLVASDV
CCCCEEEECCHHHHHHHHHHHHHCCCEEEEEECCHHHCCHHHHHHHHHCCCCCEEEECCH
AARGLDVEDLSAVVNYELPTDTETYRHRIGRTARAGKHGLALSLVAPRETARAQALEAEQ
HHCCCCHHHHHHHHCCCCCCCCHHHHHHHCCHHCCCCCCEEEEEECCCHHHHHHHHHCCC
GQPLKWSRAPLATARPAQLPQAAMTTLRIDGGKTDKLRAGDILGALTGEAGLSGAAIGKI
CCCCCCCCCCCCCCCCCCCCHHHHHEEEECCCCCCCEECCCHHHHHCCCCCCCCCEECEE
AIYPTRSYVAIARAQVAKALAHLHAGKIKGRRFRVSKL
EEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2216714; 8253085; 9097039; 9278503; 9016593; 11350034 [H]