| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84624159
Identifier: 84624159
GI number: 84624159
Start: 2791576
End: 2792874
Strand: Direct
Name: 84624159
Synonym: XOO_2502
Alternate gene names: NA
Gene position: 2791576-2792874 (Clockwise)
Preceding gene: 84624158
Following gene: 84624162
Centisome position: 56.51
GC content: 63.28
Gene sequence:
>1299_bases GTGCGTTTTGAGCAGGACGGGGAAGTAGTTGCTGCCGCCCTGTCCCATGCGGATCGCAAACAGCCCGCACACTGGTACCT GAAGGGGTTGCTACTGCCTGGAGGGCGCAAGAGCGTGGAGCCCATGGCCGCGCGGGTGCACCCGCAGAACGTGCGCTCAG CCCATCAATCGATGCACCATCTGGTGGCCGATGCCGACTGGAGCGATCAAGCGCTGCTGGCGGCGGTGGCGGCACAGGTG CTGCCGACCCTGAGCAGGAAGAGCGCAGCGTGTCACTGGATCGTGGACGACACGGGATTTTCAAAGAAGGGGGTGCATTC GGTCGGTGTTGCACGCCAGTACTGCGGCCGCCTTGGCAAGACGGACAATTGCCAGGTTGCCGTGAGTTTGTCGATCGCCA ACGAACACGGCAGCCTGCCAGTGGGCTATCGGCTGTATCTTCCCGAGCAGTGGGCTCAGGACACTGTGCGGCGCAAGAAG GCAGGCGTTCCGGATCAGGTCGTGTTTCAGACCAAGACAGCGCTGGCCATGGATCAGATCGACAGCGCGCTGGCGACAGG GATTGCGGCAGGCGTCGTGCTAGCCGATGCGGCCTACGGCACCGAGACCCACTGGCGAGACCAGCTCAGCGAACGCGGCC TGCTGTACATGGTTGGCGTCCGCAGCAACACGAAGGTCTGGTGGGGATCGCACCAACCTGCGCCCATGCCGCCAGCCAGC CCTAAGGGCGGTCGGCCCCGCACACGACCGATGCGCGATAGCGCACATGCGCCGATCTCGGTACATGAAGTCGCGCAGCG CTTGCCCGCAAGGACGTATCGGCAGGTCAGCTGGCGCCAAGGCAGCGACGCAACGCTCAGTTCGCGGTTCGCGGCGGTGC GGGTTCGTGCCGCACACAATCGCCAGGCACATGACGAGCAGTGGCTGCTGATCGAGTGGCCGCCGGGAGAGTCCGAGCCC CGCCACTACTGGTTCTCGACGCGACCAAAGCAAACGCCGGTCAAGACACTGGTTGCCACGGCACAAGGCCGATGGCGGAT TGAACGCGATTATCAGGAGCTGAAGTCGGAGTTGGGCCTGCATCACTATGAAGGGCGCAACTGGCGTGGTTTTCACCATC ACGCCAGTCTGTGCATCGCCGCATATGGGTTCTTGATGCGCGAGCGCCTGCGCAGTAAAAAAAACTCCGTCGCATTCAAG ATGCCTGCAGTATCCAAAAGCGTCCGCCCGCGCGGGTCTAGCCCCAATGCAACGTCACCATCCCAACTCGATTGCCACGC TGGCCTTCGGACTGGCTAG
Upstream 100 bases:
>100_bases GCCCAGCTTGCTGGCCGCCGCAGCCGCCAGCAAGCCGTGGTCCGAGCGGGCCCTGCGTGATGTTACCATGTTCACCGCTG AAAGTGCGTGCTAATCAGGA
Downstream 100 bases:
>100_bases GCTTATCGCCAGAAGCCTCCCACACTGCCCGTGTTGCGGGGTCTCACCGTACCAACGGATTCGGATTTAGTAACACAGTA GAATTAGGTTGTGTTAGACG
Product: ISXo8 transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MRFEQDGEVVAAALSHADRKQPAHWYLKGLLLPGGRKSVEPMAARVHPQNVRSAHQSMHHLVADADWSDQALLAAVAAQV LPTLSRKSAACHWIVDDTGFSKKGVHSVGVARQYCGRLGKTDNCQVAVSLSIANEHGSLPVGYRLYLPEQWAQDTVRRKK AGVPDQVVFQTKTALAMDQIDSALATGIAAGVVLADAAYGTETHWRDQLSERGLLYMVGVRSNTKVWWGSHQPAPMPPAS PKGGRPRTRPMRDSAHAPISVHEVAQRLPARTYRQVSWRQGSDATLSSRFAAVRVRAAHNRQAHDEQWLLIEWPPGESEP RHYWFSTRPKQTPVKTLVATAQGRWRIERDYQELKSELGLHHYEGRNWRGFHHHASLCIAAYGFLMRERLRSKKNSVAFK MPAVSKSVRPRGSSPNATSPSQLDCHAGLRTG
Sequences:
>Translated_432_residues MRFEQDGEVVAAALSHADRKQPAHWYLKGLLLPGGRKSVEPMAARVHPQNVRSAHQSMHHLVADADWSDQALLAAVAAQV LPTLSRKSAACHWIVDDTGFSKKGVHSVGVARQYCGRLGKTDNCQVAVSLSIANEHGSLPVGYRLYLPEQWAQDTVRRKK AGVPDQVVFQTKTALAMDQIDSALATGIAAGVVLADAAYGTETHWRDQLSERGLLYMVGVRSNTKVWWGSHQPAPMPPAS PKGGRPRTRPMRDSAHAPISVHEVAQRLPARTYRQVSWRQGSDATLSSRFAAVRVRAAHNRQAHDEQWLLIEWPPGESEP RHYWFSTRPKQTPVKTLVATAQGRWRIERDYQELKSELGLHHYEGRNWRGFHHHASLCIAAYGFLMRERLRSKKNSVAFK MPAVSKSVRPRGSSPNATSPSQLDCHAGLRTG >Mature_432_residues MRFEQDGEVVAAALSHADRKQPAHWYLKGLLLPGGRKSVEPMAARVHPQNVRSAHQSMHHLVADADWSDQALLAAVAAQV LPTLSRKSAACHWIVDDTGFSKKGVHSVGVARQYCGRLGKTDNCQVAVSLSIANEHGSLPVGYRLYLPEQWAQDTVRRKK AGVPDQVVFQTKTALAMDQIDSALATGIAAGVVLADAAYGTETHWRDQLSERGLLYMVGVRSNTKVWWGSHQPAPMPPAS PKGGRPRTRPMRDSAHAPISVHEVAQRLPARTYRQVSWRQGSDATLSSRFAAVRVRAAHNRQAHDEQWLLIEWPPGESEP RHYWFSTRPKQTPVKTLVATAQGRWRIERDYQELKSELGLHHYEGRNWRGFHHHASLCIAAYGFLMRERLRSKKNSVAFK MPAVSKSVRPRGSSPNATSPSQLDCHAGLRTG
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: COG5659
COG function: function code L; FOG: Transposase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012337 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48046; Mature: 48046
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFEQDGEVVAAALSHADRKQPAHWYLKGLLLPGGRKSVEPMAARVHPQNVRSAHQSMHH CCCCCCHHHHHHHHHHHHCCCCHHEEEEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHHH LVADADWSDQALLAAVAAQVLPTLSRKSAACHWIVDDTGFSKKGVHSVGVARQYCGRLGK HHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCC TDNCQVAVSLSIANEHGSLPVGYRLYLPEQWAQDTVRRKKAGVPDQVVFQTKTALAMDQI CCCCEEEEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH DSALATGIAAGVVLADAAYGTETHWRDQLSERGLLYMVGVRSNTKVWWGSHQPAPMPPAS HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEEECCCCEEEECCCCCCCCCCCC PKGGRPRTRPMRDSAHAPISVHEVAQRLPARTYRQVSWRQGSDATLSSRFAAVRVRAAHN CCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHEEEEEHHHC RQAHDEQWLLIEWPPGESEPRHYWFSTRPKQTPVKTLVATAQGRWRIERDYQELKSELGL CCCCCCCEEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHCCCCEEEHHHHHHHHHHCCC HHYEGRNWRGFHHHASLCIAAYGFLMRERLRSKKNSVAFKMPAVSKSVRPRGSSPNATSP EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCC SQLDCHAGLRTG CCCCCCCCCCCC >Mature Secondary Structure MRFEQDGEVVAAALSHADRKQPAHWYLKGLLLPGGRKSVEPMAARVHPQNVRSAHQSMHH CCCCCCHHHHHHHHHHHHCCCCHHEEEEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHHH LVADADWSDQALLAAVAAQVLPTLSRKSAACHWIVDDTGFSKKGVHSVGVARQYCGRLGK HHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCC TDNCQVAVSLSIANEHGSLPVGYRLYLPEQWAQDTVRRKKAGVPDQVVFQTKTALAMDQI CCCCEEEEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH DSALATGIAAGVVLADAAYGTETHWRDQLSERGLLYMVGVRSNTKVWWGSHQPAPMPPAS HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEEECCCCEEEECCCCCCCCCCCC PKGGRPRTRPMRDSAHAPISVHEVAQRLPARTYRQVSWRQGSDATLSSRFAAVRVRAAHN CCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHEEEEEHHHC RQAHDEQWLLIEWPPGESEPRHYWFSTRPKQTPVKTLVATAQGRWRIERDYQELKSELGL CCCCCCCEEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHCCCCEEEHHHHHHHHHHCCC HHYEGRNWRGFHHHASLCIAAYGFLMRERLRSKKNSVAFKMPAVSKSVRPRGSSPNATSP EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCC SQLDCHAGLRTG CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1662761 [H]