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The map label for this gene is fliN [H]

Identifier: 84624125

GI number: 84624125

Start: 2741973

End: 2742311

Strand: Direct

Name: fliN [H]

Synonym: XOO_2468

Alternate gene names: 84624125

Gene position: 2741973-2742311 (Clockwise)

Preceding gene: 84624124

Following gene: 84624126

Centisome position: 55.5

GC content: 63.72

Gene sequence:

>339_bases
ATGATTAACTCCGACATCCTCGACGCCTCGCCTGCCACCTTCGACAGCCTGCAGGCCGAACACGACCAGAACGCCGCCGA
CCTTAATCTGGACGTGATTTTGGACGTGCCGGTGACCCTGTCGCTGGAAGTGGGCCGCGCACGCATTCCGATCCGCAACC
TGCTGCAGCTCAACCAGGGCTCGGTGGTGGAACTGGAACGCGGCGCCGGCGAACCGCTGGACGTGTACGTCAACGGCACC
CTGATCGCACACGGCGAAGTGGTCGTCGTCAACGACCGCTTCGGTATTCGCCTGACCGATGTGGTCAGCCCCAGCGAACG
GATCCGGAGGCTGCGGTGA

Upstream 100 bases:

>100_bases
AATTCGGCGTTTCCAATGGCAACAACGCCGTCAAGATCACCGCCGTACGCCCGCCCGGCGTGCAAGCCCCACGCGCCGTT
CCCTCCCAGGACTCCAGCAA

Downstream 100 bases:

>100_bases
TCGGCCTGCTTGCCACCGTCGCGCCAGTCGCGCCAGTCGCGGCCAAGGCGACCCAGGTCGGCGCGCAGGCGCCGTCCTCG
CCCAGCCTGTTTGGCGCAAT

Product: flagellar protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MINSDILDASPATFDSLQAEHDQNAADLNLDVILDVPVTLSLEVGRARIPIRNLLQLNQGSVVELERGAGEPLDVYVNGT
LIAHGEVVVVNDRFGIRLTDVVSPSERIRRLR

Sequences:

>Translated_112_residues
MINSDILDASPATFDSLQAEHDQNAADLNLDVILDVPVTLSLEVGRARIPIRNLLQLNQGSVVELERGAGEPLDVYVNGT
LIAHGEVVVVNDRFGIRLTDVVSPSERIRRLR
>Mature_112_residues
MINSDILDASPATFDSLQAEHDQNAADLNLDVILDVPVTLSLEVGRARIPIRNLLQLNQGSVVELERGAGEPLDVYVNGT
LIAHGEVVVVNDRFGIRLTDVVSPSERIRRLR

Specific function: FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side (Potential). Bacterial flagellum basal body (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliN/MopA/SpaO family [H]

Homologues:

Organism=Escherichia coli, GI1788256, Length=83, Percent_Identity=59.0361445783133, Blast_Score=110, Evalue=2e-26,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012826
- InterPro:   IPR001172
- InterPro:   IPR001543 [H]

Pfam domain/function: PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 12267; Mature: 12267

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINSDILDASPATFDSLQAEHDQNAADLNLDVILDVPVTLSLEVGRARIPIRNLLQLNQG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCEECCHHHHHCCCCC
SVVELERGAGEPLDVYVNGTLIAHGEVVVVNDRFGIRLTDVVSPSERIRRLR
CEEEEECCCCCCEEEEECCEEEECCCEEEEECCCCEEEEECCCCHHHHHCCC
>Mature Secondary Structure
MINSDILDASPATFDSLQAEHDQNAADLNLDVILDVPVTLSLEVGRARIPIRNLLQLNQG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCEECCHHHHHCCCCC
SVVELERGAGEPLDVYVNGTLIAHGEVVVVNDRFGIRLTDVVSPSERIRRLR
CEEEEECCCCCCEEEEECCEEEECCCEEEEECCCCEEEEECCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7622217; 10984043 [H]