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The map label for this gene is fliM [H]

Identifier: 84624124

GI number: 84624124

Start: 2740963

End: 2741976

Strand: Direct

Name: fliM [H]

Synonym: XOO_2467

Alternate gene names: 84624124

Gene position: 2740963-2741976 (Clockwise)

Preceding gene: 84624123

Following gene: 84624125

Centisome position: 55.48

GC content: 62.92

Gene sequence:

>1014_bases
ATGAGCGTCAGTGATCTGCTTTCCCAAGACGAGATCGATGCCCTGCTGCATGGCGTGGATTCGGGCGCGGTCAATACCGA
GCCGGAGCCGCTGCCCGGCGAGGCCCGTCAATACGATCTGTCCAGCCAGGACCGCATCATCCGTGGGCGCATGCCAACCA
TGGAGATGGTCAACGAGCGCTTTGCGCGGCTGTGGCGCATCGGCCTGTTCAATCTAATCCGGCGCTCGGCCGATTTGTCG
GTGCGCGGCATCGACCTGGTCAAGTTCAACGAATACATGCACTCGCTGTATGTGCCGACCAACCTCAACCTGATCCGCTT
CAAACCGCTGCGCGGCACCGGCCTGATCGTGTTCGAACCCACGCTGGTGTTCACCGTGGTGGACAACTTCTTCGGCGGCG
ACGGCCGGTATCACACCCGCATCGAAGGCCGCGAATTCACCGCCACCGAAATGCGCGTGGTGCAGCTGATGCTCAAGCAG
ACCTTCGCCGACTTGAAGGAAGCCTGGGCGCCGGTGATGGACGTGGACTTGGAGTACATCAACTCGGAGATCAACCCGCA
CTTCGCCAACATCGTCACCCCGCGCGAGTACGTGGTGGTGTGCCGCTTCCATGTGGAGCTGGAAGGCGGCGGTGGCGAGA
TCCACATCACCCTGCCCTATTCGATGCTGGAGCCGATCCGCGAACTGCTCGACGCCGGCATCCAGAGCGACCGCAACGAC
CGCGACGACTCCTGGAACGTGATGCTGCGCGAGCAGCTGGACACCGCCGAGGTGACCCTGTCCAGCGTGCTGGCCAGCAA
GCGCATGAGTCTGCGCCAGCTCACCGGTTTGAAGGTCGGCGACATCCTGCCGATCGACCTGCCCGCCCAGGTGCCGCTGT
GCGTGGAAGAAATCCCGTTATTCACCGGCGAATTCGGCGTTTCCAATGGCAACAACGCCGTCAAGATCACCGCCGTACGC
CCGCCCGGCGTGCAAGCCCCACGCGCCGTTCCCTCCCAGGACTCCAGCAAATGA

Upstream 100 bases:

>100_bases
GCACTGGCGGAAACGCAGAAGGTCATGACCAGCGAGACCGGCAAGAAGTGCGTCGAAGAATTGCTGTTCACCAGTTTCGT
TACTCAGTAAGGCCTGCCCC

Downstream 100 bases:

>100_bases
TTAACTCCGACATCCTCGACGCCTCGCCTGCCACCTTCGACAGCCTGCAGGCCGAACACGACCAGAACGCCGCCGACCTT
AATCTGGACGTGATTTTGGA

Product: flagellar motor switch protein FliM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MSVSDLLSQDEIDALLHGVDSGAVNTEPEPLPGEARQYDLSSQDRIIRGRMPTMEMVNERFARLWRIGLFNLIRRSADLS
VRGIDLVKFNEYMHSLYVPTNLNLIRFKPLRGTGLIVFEPTLVFTVVDNFFGGDGRYHTRIEGREFTATEMRVVQLMLKQ
TFADLKEAWAPVMDVDLEYINSEINPHFANIVTPREYVVVCRFHVELEGGGGEIHITLPYSMLEPIRELLDAGIQSDRND
RDDSWNVMLREQLDTAEVTLSSVLASKRMSLRQLTGLKVGDILPIDLPAQVPLCVEEIPLFTGEFGVSNGNNAVKITAVR
PPGVQAPRAVPSQDSSK

Sequences:

>Translated_337_residues
MSVSDLLSQDEIDALLHGVDSGAVNTEPEPLPGEARQYDLSSQDRIIRGRMPTMEMVNERFARLWRIGLFNLIRRSADLS
VRGIDLVKFNEYMHSLYVPTNLNLIRFKPLRGTGLIVFEPTLVFTVVDNFFGGDGRYHTRIEGREFTATEMRVVQLMLKQ
TFADLKEAWAPVMDVDLEYINSEINPHFANIVTPREYVVVCRFHVELEGGGGEIHITLPYSMLEPIRELLDAGIQSDRND
RDDSWNVMLREQLDTAEVTLSSVLASKRMSLRQLTGLKVGDILPIDLPAQVPLCVEEIPLFTGEFGVSNGNNAVKITAVR
PPGVQAPRAVPSQDSSK
>Mature_336_residues
SVSDLLSQDEIDALLHGVDSGAVNTEPEPLPGEARQYDLSSQDRIIRGRMPTMEMVNERFARLWRIGLFNLIRRSADLSV
RGIDLVKFNEYMHSLYVPTNLNLIRFKPLRGTGLIVFEPTLVFTVVDNFFGGDGRYHTRIEGREFTATEMRVVQLMLKQT
FADLKEAWAPVMDVDLEYINSEINPHFANIVTPREYVVVCRFHVELEGGGGEIHITLPYSMLEPIRELLDAGIQSDRNDR
DDSWNVMLREQLDTAEVTLSSVLASKRMSLRQLTGLKVGDILPIDLPAQVPLCVEEIPLFTGEFGVSNGNNAVKITAVRP
PGVQAPRAVPSQDSSK

Specific function: FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

Organism=Escherichia coli, GI1788255, Length=315, Percent_Identity=45.0793650793651, Blast_Score=268, Evalue=3e-73,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001689
- InterPro:   IPR001543 [H]

Pfam domain/function: PF02154 FliM; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 37824; Mature: 37693

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVSDLLSQDEIDALLHGVDSGAVNTEPEPLPGEARQYDLSSQDRIIRGRMPTMEMVNER
CCHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHH
FARLWRIGLFNLIRRSADLSVRGIDLVKFNEYMHSLYVPTNLNLIRFKPLRGTGLIVFEP
HHHHHHHHHHHHHHHCCCCEEEEEEEEEHHHHHHHEECCCCCCEEEEECCCCCEEEEECC
TLVFTVVDNFFGGDGRYHTRIEGREFTATEMRVVQLMLKQTFADLKEAWAPVMDVDLEYI
CEEEEEHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHH
NSEINPHFANIVTPREYVVVCRFHVELEGGGGEIHITLPYSMLEPIRELLDAGIQSDRND
CCCCCCCHHEECCCCEEEEEEEEEEEEECCCCEEEEEECHHHHHHHHHHHHHHCCCCCCC
RDDSWNVMLREQLDTAEVTLSSVLASKRMSLRQLTGLKVGDILPIDLPAQVPLCVEEIPL
CCCCCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHCCC
FTGEFGVSNGNNAVKITAVRPPGVQAPRAVPSQDSSK
EECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SVSDLLSQDEIDALLHGVDSGAVNTEPEPLPGEARQYDLSSQDRIIRGRMPTMEMVNER
CHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHH
FARLWRIGLFNLIRRSADLSVRGIDLVKFNEYMHSLYVPTNLNLIRFKPLRGTGLIVFEP
HHHHHHHHHHHHHHHCCCCEEEEEEEEEHHHHHHHEECCCCCCEEEEECCCCCEEEEECC
TLVFTVVDNFFGGDGRYHTRIEGREFTATEMRVVQLMLKQTFADLKEAWAPVMDVDLEYI
CEEEEEHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHH
NSEINPHFANIVTPREYVVVCRFHVELEGGGGEIHITLPYSMLEPIRELLDAGIQSDRND
CCCCCCCHHEECCCCEEEEEEEEEEEEECCCCEEEEEECHHHHHHHHHHHHHHCCCCCCC
RDDSWNVMLREQLDTAEVTLSSVLASKRMSLRQLTGLKVGDILPIDLPAQVPLCVEEIPL
CCCCCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHCCC
FTGEFGVSNGNNAVKITAVRPPGVQAPRAVPSQDSSK
EECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043; 7622217 [H]