| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is fliK [C]
Identifier: 84624122
GI number: 84624122
Start: 2738962
End: 2740236
Strand: Direct
Name: fliK [C]
Synonym: XOO_2465
Alternate gene names: 84624122
Gene position: 2738962-2740236 (Clockwise)
Preceding gene: 84624121
Following gene: 84624123
Centisome position: 55.44
GC content: 70.59
Gene sequence:
>1275_bases ATGAATCCCCTGTCCGCCTTCGCCGCCGGCCTCGGCGCGCTTGCCGGCACTGGCAAGAAATCCAGTTACAGCGACCCGTC GTCCGAACCGGACGCAGGCCAGGACCAGTTTGCGCGCATGCTCAATCCGGCCAACACGCCGCACCAGGCCCCGCCGCAGG CGCCAGAACGCGTGCCCGCCAAGCAGGCCGCGCCCAAGTCCAACCAGTCCGACAATAATCGCAGCGACGACGACAACCGC GACGACGCGGCCGGCGATGCCAAGCCGGCCAAGTCCGGCACCGCCAAGGACGCGGCAGCGTCCGACAAGAGCGCCGCTAC CGCTGCCAGCAAGACCGGCAAGAACACCAAGACCGCCGCCACGGCGAGCGAGGACGCACCCGCAGAGGCGGCAACTGCAT CGGCGACCGATGCCGGCTGGCCGCCCGCGGGCCTGGGCGGCTTCGGCATGGGCTTGCTGGCGCAGGCGCTGCCGGGTGGC GATGTGCTGGCTGCCGCAGCCGCGGCGCTGACCGCCAGCATGGCCGGCGCAGCCAACGCCGCCGGGACGGCCACCGCATT GCCCACCGATGCAACCGCCGCCAACGCAACCGCGAGCGCTGCCCCCGCCCTGCCCGCGTTGGGCGCACTGGTGCCGGCCG CCGCCGCAGGCGCAGGCGGCAAACCCACGTCGACCACCGCCGTAAACGGCGACGCACAGACTGCCGCGCTGATGAGCATG GCCGCCAAAGCGCTGGAACCGGCTGCCGACGACAGTACCGCTCCGGCCGCGCCGGACACCCCGGCGTTCGCGCTGCCGAC CACCACCGCGCCGGCGCTCAGCCGCCTGCAGGATGCGGCGCCGATTTTCAGCGCCTCGCCCACCCCCACCCCGGACCTGG GCAGCGACAACTTCGACGATGCCATCGGCGCACGCATGAGTTGGCTGGCCGACCAGAAGATCGGCCACGCCCACATCAAG GTGACCCCGAACGAGATGGGTCCGGTCGAAGTGCGTCTGCATCTGGACGGCGACAAGGTCAATGCCAGCTTCACCGCTGC CAATGCCGACACCCGTCAGGCGCTGGAACAGAGCCTGCCGCGGCTGCGCGAAATGCTCGGCCAGAACGGCTTCCAGCTTG GCCAGGCCGATGTCGGCCAGCAACACCAGCATCCGTCCGGCAATCGCAATGGCGGCAATGGCCACGGCAACGGCCTCACC CTGGACGACAGCCCGCCCGTCGGAATTCCGTCGGTGGTGTTACGCCAGCGTGGATTGCTGGACGCCTACGCCTGA
Upstream 100 bases:
>100_bases AAAACAAAGTGATCGAACGCCGCGACCAGCGTGAGATGGACGACCTCGGCGCGCGTCGTTCGCGTCTGGCCCGCAGCCAG GACACCCACGGAGAATCCGC
Downstream 100 bases:
>100_bases GATAACGTGCCGGGCACGCCCCGGCACCGCTGAACATCGCGCCTCGGCTGCCTGCCGATGACGCGCCTGCATCCTCGCAG CGCAAGGATTGCGGGGGTTT
Product: flagellar protein
Products: NA
Alternate protein names: Flagellar Protein; Flagellar Hook-Length Control Protein FliK; Flagellar Hook Length Control Protein; Flagellar Hook-Length Control Protein-Like Protein
Number of amino acids: Translated: 424; Mature: 424
Protein sequence:
>424_residues MNPLSAFAAGLGALAGTGKKSSYSDPSSEPDAGQDQFARMLNPANTPHQAPPQAPERVPAKQAAPKSNQSDNNRSDDDNR DDAAGDAKPAKSGTAKDAAASDKSAATAASKTGKNTKTAATASEDAPAEAATASATDAGWPPAGLGGFGMGLLAQALPGG DVLAAAAAALTASMAGAANAAGTATALPTDATAANATASAAPALPALGALVPAAAAGAGGKPTSTTAVNGDAQTAALMSM AAKALEPAADDSTAPAAPDTPAFALPTTTAPALSRLQDAAPIFSASPTPTPDLGSDNFDDAIGARMSWLADQKIGHAHIK VTPNEMGPVEVRLHLDGDKVNASFTAANADTRQALEQSLPRLREMLGQNGFQLGQADVGQQHQHPSGNRNGGNGHGNGLT LDDSPPVGIPSVVLRQRGLLDAYA
Sequences:
>Translated_424_residues MNPLSAFAAGLGALAGTGKKSSYSDPSSEPDAGQDQFARMLNPANTPHQAPPQAPERVPAKQAAPKSNQSDNNRSDDDNR DDAAGDAKPAKSGTAKDAAASDKSAATAASKTGKNTKTAATASEDAPAEAATASATDAGWPPAGLGGFGMGLLAQALPGG DVLAAAAAALTASMAGAANAAGTATALPTDATAANATASAAPALPALGALVPAAAAGAGGKPTSTTAVNGDAQTAALMSM AAKALEPAADDSTAPAAPDTPAFALPTTTAPALSRLQDAAPIFSASPTPTPDLGSDNFDDAIGARMSWLADQKIGHAHIK VTPNEMGPVEVRLHLDGDKVNASFTAANADTRQALEQSLPRLREMLGQNGFQLGQADVGQQHQHPSGNRNGGNGHGNGLT LDDSPPVGIPSVVLRQRGLLDAYA >Mature_424_residues MNPLSAFAAGLGALAGTGKKSSYSDPSSEPDAGQDQFARMLNPANTPHQAPPQAPERVPAKQAAPKSNQSDNNRSDDDNR DDAAGDAKPAKSGTAKDAAASDKSAATAASKTGKNTKTAATASEDAPAEAATASATDAGWPPAGLGGFGMGLLAQALPGG DVLAAAAAALTASMAGAANAAGTATALPTDATAANATASAAPALPALGALVPAAAAGAGGKPTSTTAVNGDAQTAALMSM AAKALEPAADDSTAPAAPDTPAFALPTTTAPALSRLQDAAPIFSASPTPTPDLGSDNFDDAIGARMSWLADQKIGHAHIK VTPNEMGPVEVRLHLDGDKVNASFTAANADTRQALEQSLPRLREMLGQNGFQLGQADVGQQHQHPSGNRNGGNGHGNGLT LDDSPPVGIPSVVLRQRGLLDAYA
Specific function: Controls The Length Of The Flagellar Hook. [C]
COG id: COG3144
COG function: function code N; Flagellar hook-length control protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41870; Mature: 41870
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPLSAFAAGLGALAGTGKKSSYSDPSSEPDAGQDQFARMLNPANTPHQAPPQAPERVPA CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHCCH KQAAPKSNQSDNNRSDDDNRDDAAGDAKPAKSGTAKDAAASDKSAATAASKTGKNTKTAA HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCHHC TASEDAPAEAATASATDAGWPPAGLGGFGMGLLAQALPGGDVLAAAAAALTASMAGAANA CCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC AGTATALPTDATAANATASAAPALPALGALVPAAAAGAGGKPTSTTAVNGDAQTAALMSM CCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHH AAKALEPAADDSTAPAAPDTPAFALPTTTAPALSRLQDAAPIFSASPTPTPDLGSDNFDD HHHHHCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH AIGARMSWLADQKIGHAHIKVTPNEMGPVEVRLHLDGDKVNASFTAANADTRQALEQSLP HHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEECCCCCCCEEEECCCHHHHHHHHHHH RLREMLGQNGFQLGQADVGQQHQHPSGNRNGGNGHGNGLTLDDSPPVGIPSVVLRQRGLL HHHHHHCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCH DAYA HHCC >Mature Secondary Structure MNPLSAFAAGLGALAGTGKKSSYSDPSSEPDAGQDQFARMLNPANTPHQAPPQAPERVPA CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHCCH KQAAPKSNQSDNNRSDDDNRDDAAGDAKPAKSGTAKDAAASDKSAATAASKTGKNTKTAA HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCHHC TASEDAPAEAATASATDAGWPPAGLGGFGMGLLAQALPGGDVLAAAAAALTASMAGAANA CCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC AGTATALPTDATAANATASAAPALPALGALVPAAAAGAGGKPTSTTAVNGDAQTAALMSM CCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHH AAKALEPAADDSTAPAAPDTPAFALPTTTAPALSRLQDAAPIFSASPTPTPDLGSDNFDD HHHHHCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH AIGARMSWLADQKIGHAHIKVTPNEMGPVEVRLHLDGDKVNASFTAANADTRQALEQSLP HHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEECCCCCCCEEEECCCHHHHHHHHHHH RLREMLGQNGFQLGQADVGQQHQHPSGNRNGGNGHGNGLTLDDSPPVGIPSVVLRQRGLL HHHHHHCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCH DAYA HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA