| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84624100
Identifier: 84624100
GI number: 84624100
Start: 2716082
End: 2716648
Strand: Direct
Name: 84624100
Synonym: XOO_2443
Alternate gene names: NA
Gene position: 2716082-2716648 (Clockwise)
Preceding gene: 84624099
Following gene: 84624101
Centisome position: 54.98
GC content: 65.78
Gene sequence:
>567_bases ATGAGCACGCTCGGCACACTCGCGCCATCTGCCGACGCCGAGCTGTTTGCCGACACGCTTAGTTGCGAGTTGCAGTTGCC TGCCAGCTTCCGCGCCGGGAGCGACGCCGGCACGCACAGCGCCGCGGAAACCCTATTGCGCAGCCTCGGCCAGGTCGAAG ACTTGCGTAGCGAGGAAACCAGCGAAGACCGCGGGGAACTGCCGTTGCTGGTGCAGCGCATGGACGCCAAACTCGATTTG ATGCTCGCGCTGATCGGCCGCTTGGTGCGCCACGGCGACAGCGGCCTGAGCCAGGGCTTGGTACGTTGGTCGGTGCGCGG CATTCGCCTGAGTTGCGCAAGCAGCCACGCACCAGGCACCACTGGCAGTGTTTGTTTGCAGCCATCCGATTGGCTTCCTG AACTTGTACAGCTTCCTGCCACCGTGCTGGCGAGCGCGAGCGATGGCCACGATGTCTGGCTGTGGCTGCGGTTTGCCCCG CTTGCGCCGGGCCTGCAGGACGCGCTGGAACGCCACCTGTTTCGTTTGCATCGCCGTCAGGTAGCCGACGCCCGCCGCCA GCGCTGA
Upstream 100 bases:
>100_bases GGATGATGCGCGAACGTCAGCGCAAGCTGCTGGAGCTCATCCGCGCACAGCGCACGTCGTCGTCGGCCAGCCGCGCTTAC GCACGGGTCGGACGGATCTG
Downstream 100 bases:
>100_bases TTCCCATGGTTGGCGCGGGGCGCCGGTTCAGCTAAGGTGGTCTTCACTGAAAAAAGGTCTCTTCTGCGCCGTGCGAGTCA TCATCGTCGACGATCACACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MSTLGTLAPSADAELFADTLSCELQLPASFRAGSDAGTHSAAETLLRSLGQVEDLRSEETSEDRGELPLLVQRMDAKLDL MLALIGRLVRHGDSGLSQGLVRWSVRGIRLSCASSHAPGTTGSVCLQPSDWLPELVQLPATVLASASDGHDVWLWLRFAP LAPGLQDALERHLFRLHRRQVADARRQR
Sequences:
>Translated_188_residues MSTLGTLAPSADAELFADTLSCELQLPASFRAGSDAGTHSAAETLLRSLGQVEDLRSEETSEDRGELPLLVQRMDAKLDL MLALIGRLVRHGDSGLSQGLVRWSVRGIRLSCASSHAPGTTGSVCLQPSDWLPELVQLPATVLASASDGHDVWLWLRFAP LAPGLQDALERHLFRLHRRQVADARRQR >Mature_187_residues STLGTLAPSADAELFADTLSCELQLPASFRAGSDAGTHSAAETLLRSLGQVEDLRSEETSEDRGELPLLVQRMDAKLDLM LALIGRLVRHGDSGLSQGLVRWSVRGIRLSCASSHAPGTTGSVCLQPSDWLPELVQLPATVLASASDGHDVWLWLRFAPL APGLQDALERHLFRLHRRQVADARRQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20439; Mature: 20308
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLGTLAPSADAELFADTLSCELQLPASFRAGSDAGTHSAAETLLRSLGQVEDLRSEET CCCCCCCCCCCCHHHHHHHHHCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC SEDRGELPLLVQRMDAKLDLMLALIGRLVRHGDSGLSQGLVRWSVRGIRLSCASSHAPGT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEECCCCCCCC TGSVCLQPSDWLPELVQLPATVLASASDGHDVWLWLRFAPLAPGLQDALERHLFRLHRRQ CCCEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHH VADARRQR HHHHHHCC >Mature Secondary Structure STLGTLAPSADAELFADTLSCELQLPASFRAGSDAGTHSAAETLLRSLGQVEDLRSEET CCCCCCCCCCCHHHHHHHHHCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC SEDRGELPLLVQRMDAKLDLMLALIGRLVRHGDSGLSQGLVRWSVRGIRLSCASSHAPGT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEECCCCCCCC TGSVCLQPSDWLPELVQLPATVLASASDGHDVWLWLRFAPLAPGLQDALERHLFRLHRRQ CCCEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHH VADARRQR HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA