| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is flgI [H]
Identifier: 84624092
GI number: 84624092
Start: 2706712
End: 2707830
Strand: Direct
Name: flgI [H]
Synonym: XOO_2435
Alternate gene names: 84624092
Gene position: 2706712-2707830 (Clockwise)
Preceding gene: 84624091
Following gene: 162319800
Centisome position: 54.79
GC content: 66.22
Gene sequence:
>1119_bases ATGAACCTGTCTTCCCTGTCCTTCCGTCTGCTGGCCACGTTGCTGGGGGCCTGCGTGGTCGTCGCGCCGGCCTCGGCCGA GCGCATCAAGGATCTTGCCCAGGTCGGCGGCGTGCGCGGCAACGCGCTGGTCGGTTACGGCCTGGTGGTTGGCCTGGACG GCAGCGGCGACCGCACCAGCCAGGCGCCCTTCACCGTGCAGAGCCTGAAAAACCTGCTCGGCGAACTGGGCGTCAATGTT CCGGCCAACGTCAACCCGCAGCTGAAAAACGTCGCGGCCGTGGCCATCCATGCCGAATTGCCGCCGTTCGCCAAGCCCGG CCAGCCGATCGACATCACCGTCTCCTCGATCGCCAACGCCGTGTCGCTGCGTGGCGGCTCGCTGCTGATGGCACCGCTGA AAGGCGCCGATGGCCAGGTCTATGCGATGGCCCAGGGCAACCTGGTGGTCGGCGGCTTTGGTGCACAAGGCAAGGACGGC TCGCGCGTCTCGGTCAATGTGCCCAGTGTCGGTCGTATTCCCAATGGCGCCATCGTCGAACGCGCATTGCCGGACGTGTT TGCCGGCACCGGCGAGATCACGCTGAATCTGCATCAGAACGACTTCACCACCGTCTCGCGCATGGTCGCGGCCATCGACA GCAGCTTCGGCGCTGGGACCGCGCGTGCGGTGGACGGCGTGACCGTTGCGGTGCGCTCGCCAACCGACCCGGGTGCGCGC ATCGGCCTGTTGTCGCGACTGGAAAACGTCGAACTCTCGCCTGGCGATGCACCGGCCAAGGTCGTGGTCAATGCACGTAC CGGCACCGTGGTCATCGGCCAGCTGGTACGCGTGATGCCAGCGGCCATTGCGCATGGCTCGCTCACCGTGACCATCAGCG AAAACACCAATGTCAGCCAGCCGGGTGCCTTCAGTGGCGGCCGCACCGCAGTGACCCAGCAATCGACGATCACGGCCACC TCCGAAGGCAGCCGCATGTTCAAGTTCGAAGGCGGCACCACGCTCGATCAGATCGTGCGCGCAGTCAACGAAGTGGGCGC CGCTCCCGGCGACCTGGTGGCCATCCTGGAAGCGCTCAAGCAAGCCGGTGCGCTCTCGGCGGAGCTAGAGGTGATCTGA
Upstream 100 bases:
>100_bases ATCGCTTACGGCGGCCGCGGCGCGATCGCTCAATCCAACGCGATGGGCTGGCTGAGCCGCTTCTTCAATTCCCGTCTGTC GCCCTACTGAGCCTGCGACC
Downstream 100 bases:
>100_bases CATGCGTATCGCAGCCTCGCCCATTGATCTCAACCCGAGCACCAAGGCCGATCCCGCAAAGATCGACAAGGTCTCACGTC AGCTCGAAGGTCAGTTCGCG
Product: flagellar basal body P-ring protein
Products: NA
Alternate protein names: Basal body P-ring protein [H]
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MNLSSLSFRLLATLLGACVVVAPASAERIKDLAQVGGVRGNALVGYGLVVGLDGSGDRTSQAPFTVQSLKNLLGELGVNV PANVNPQLKNVAAVAIHAELPPFAKPGQPIDITVSSIANAVSLRGGSLLMAPLKGADGQVYAMAQGNLVVGGFGAQGKDG SRVSVNVPSVGRIPNGAIVERALPDVFAGTGEITLNLHQNDFTTVSRMVAAIDSSFGAGTARAVDGVTVAVRSPTDPGAR IGLLSRLENVELSPGDAPAKVVVNARTGTVVIGQLVRVMPAAIAHGSLTVTISENTNVSQPGAFSGGRTAVTQQSTITAT SEGSRMFKFEGGTTLDQIVRAVNEVGAAPGDLVAILEALKQAGALSAELEVI
Sequences:
>Translated_372_residues MNLSSLSFRLLATLLGACVVVAPASAERIKDLAQVGGVRGNALVGYGLVVGLDGSGDRTSQAPFTVQSLKNLLGELGVNV PANVNPQLKNVAAVAIHAELPPFAKPGQPIDITVSSIANAVSLRGGSLLMAPLKGADGQVYAMAQGNLVVGGFGAQGKDG SRVSVNVPSVGRIPNGAIVERALPDVFAGTGEITLNLHQNDFTTVSRMVAAIDSSFGAGTARAVDGVTVAVRSPTDPGAR IGLLSRLENVELSPGDAPAKVVVNARTGTVVIGQLVRVMPAAIAHGSLTVTISENTNVSQPGAFSGGRTAVTQQSTITAT SEGSRMFKFEGGTTLDQIVRAVNEVGAAPGDLVAILEALKQAGALSAELEVI >Mature_372_residues MNLSSLSFRLLATLLGACVVVAPASAERIKDLAQVGGVRGNALVGYGLVVGLDGSGDRTSQAPFTVQSLKNLLGELGVNV PANVNPQLKNVAAVAIHAELPPFAKPGQPIDITVSSIANAVSLRGGSLLMAPLKGADGQVYAMAQGNLVVGGFGAQGKDG SRVSVNVPSVGRIPNGAIVERALPDVFAGTGEITLNLHQNDFTTVSRMVAAIDSSFGAGTARAVDGVTVAVRSPTDPGAR IGLLSRLENVELSPGDAPAKVVVNARTGTVVIGQLVRVMPAAIAHGSLTVTISENTNVSQPGAFSGGRTAVTQQSTITAT SEGSRMFKFEGGTTLDQIVRAVNEVGAAPGDLVAILEALKQAGALSAELEVI
Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]
COG id: COG1706
COG function: function code N; Flagellar basal-body P-ring protein
Gene ontology:
Cell location: Periplasm. Bacterial flagellum basal body (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flgI family [H]
Homologues:
Organism=Escherichia coli, GI1787320, Length=366, Percent_Identity=46.9945355191257, Blast_Score=293, Evalue=1e-80,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001782 [H]
Pfam domain/function: PF02119 FlgI [H]
EC number: NA
Molecular weight: Translated: 37666; Mature: 37666
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLSSLSFRLLATLLGACVVVAPASAERIKDLAQVGGVRGNALVGYGLVVGLDGSGDRTS CCCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCC QAPFTVQSLKNLLGELGVNVPANVNPQLKNVAAVAIHAELPPFAKPGQPIDITVSSIANA CCCEEHHHHHHHHHHHCCCCCCCCCCCHHCEEEEEEEECCCCCCCCCCCEEEEHHHHHHH VSLRGGSLLMAPLKGADGQVYAMAQGNLVVGGFGAQGKDGSRVSVNVPSVGRIPNGAIVE HHCCCCCEEEEECCCCCCEEEEEEECCEEEEECCCCCCCCCEEEEECCCCCCCCCCHHHH RALPDVFAGTGEITLNLHQNDFTTVSRMVAAIDSSFGAGTARAVDGVTVAVRSPTDPGAR HHCHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCHHCCCCEEEEEECCCCCCHH IGLLSRLENVELSPGDAPAKVVVNARTGTVVIGQLVRVMPAAIAHGSLTVTISENTNVSQ HHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCC PGAFSGGRTAVTQQSTITATSEGSRMFKFEGGTTLDQIVRAVNEVGAAPGDLVAILEALK CCCCCCCCEEEEECCEEEEECCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH QAGALSAELEVI HCCCCCEEEEEC >Mature Secondary Structure MNLSSLSFRLLATLLGACVVVAPASAERIKDLAQVGGVRGNALVGYGLVVGLDGSGDRTS CCCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCC QAPFTVQSLKNLLGELGVNVPANVNPQLKNVAAVAIHAELPPFAKPGQPIDITVSSIANA CCCEEHHHHHHHHHHHCCCCCCCCCCCHHCEEEEEEEECCCCCCCCCCCEEEEHHHHHHH VSLRGGSLLMAPLKGADGQVYAMAQGNLVVGGFGAQGKDGSRVSVNVPSVGRIPNGAIVE HHCCCCCEEEEECCCCCCEEEEEEECCEEEEECCCCCCCCCEEEEECCCCCCCCCCHHHH RALPDVFAGTGEITLNLHQNDFTTVSRMVAAIDSSFGAGTARAVDGVTVAVRSPTDPGAR HHCHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCHHCCCCEEEEEECCCCCCHH IGLLSRLENVELSPGDAPAKVVVNARTGTVVIGQLVRVMPAAIAHGSLTVTISENTNVSQ HHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCC PGAFSGGRTAVTQQSTITATSEGSRMFKFEGGTTLDQIVRAVNEVGAAPGDLVAILEALK CCCCCCCCEEEEECCEEEEECCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH QAGALSAELEVI HCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]