Click here to switch to the map view.

The map label for this gene is flgH

Identifier: 84624091

GI number: 84624091

Start: 2706009

End: 2706701

Strand: Direct

Name: flgH

Synonym: XOO_2434

Alternate gene names: 84624091

Gene position: 2706009-2706701 (Clockwise)

Preceding gene: 84624090

Following gene: 84624092

Centisome position: 54.78

GC content: 67.24

Gene sequence:

>693_bases
ATGTCACGTCCCCCCCTCCTTTCATCGGCCTGCCTGGCCGCCACTTGCAGCCTGTTGCTGGGCGGCTGCGTGGCAGCCGG
CGACGTTCGTCCCTACGCGGCGATGGCACCGATCGTGCCGGTGGTCGCACCGACCGTGCAGCCGACCGCCGGGGCCATCT
ACGCCGCCGGCCCCGGCCTGAACCTGTACGGCGATCGCCGCGCACGCGATGTCGGCGACCTGCTGACCATCACCCTGATC
GAAAGCACCACCGCATCCTCCAGCGCCAACACCAGCACCAGCAAGAAGGACGCCACCACGATGGCGTCCCCCACCCTGCT
GGGTGCGCCGCTGACGGTGGCTGGACTGGACGTGCTGCAGAACACCCTCAAGGGCGACCGCGCCTTCGATGGCAAGGGTA
ATACGGCGCAGAGCAATCGCATGCAGGGCAGCGTGACGGTCACCGTGATCCAGCGCCTGCCCAACGGCAATCTGGTCGTG
CAGGGGCAGAAGAATCTGCGTCTGAACCAGGGCGACGAGCTGGTGCAGGTGCAAGGCATCGTCCGCGACGCCGACATCGC
GCCGGACAACACCATCCCCTCCAGCAAGGTGGCCGAAGCGCGTATCGCTTACGGCGGCCGCGGCGCGATCGCTCAATCCA
ACGCGATGGGCTGGCTGAGCCGCTTCTTCAATTCCCGTCTGTCGCCCTACTGA

Upstream 100 bases:

>100_bases
ATGAACGCCAAGGCCATCTCCACCACCGACGCGATGCTCGGCTACTTGAACAACAACGTCTGAGCGGCTCGCCGCTCGCT
GACCTCCAGGACCGCACGCC

Downstream 100 bases:

>100_bases
GCCTGCGACCATGAACCTGTCTTCCCTGTCCTTCCGTCTGCTGGCCACGTTGCTGGGGGCCTGCGTGGTCGTCGCGCCGG
CCTCGGCCGAGCGCATCAAG

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MSRPPLLSSACLAATCSLLLGGCVAAGDVRPYAAMAPIVPVVAPTVQPTAGAIYAAGPGLNLYGDRRARDVGDLLTITLI
ESTTASSSANTSTSKKDATTMASPTLLGAPLTVAGLDVLQNTLKGDRAFDGKGNTAQSNRMQGSVTVTVIQRLPNGNLVV
QGQKNLRLNQGDELVQVQGIVRDADIAPDNTIPSSKVAEARIAYGGRGAIAQSNAMGWLSRFFNSRLSPY

Sequences:

>Translated_230_residues
MSRPPLLSSACLAATCSLLLGGCVAAGDVRPYAAMAPIVPVVAPTVQPTAGAIYAAGPGLNLYGDRRARDVGDLLTITLI
ESTTASSSANTSTSKKDATTMASPTLLGAPLTVAGLDVLQNTLKGDRAFDGKGNTAQSNRMQGSVTVTVIQRLPNGNLVV
QGQKNLRLNQGDELVQVQGIVRDADIAPDNTIPSSKVAEARIAYGGRGAIAQSNAMGWLSRFFNSRLSPY
>Mature_229_residues
SRPPLLSSACLAATCSLLLGGCVAAGDVRPYAAMAPIVPVVAPTVQPTAGAIYAAGPGLNLYGDRRARDVGDLLTITLIE
STTASSSANTSTSKKDATTMASPTLLGAPLTVAGLDVLQNTLKGDRAFDGKGNTAQSNRMQGSVTVTVIQRLPNGNLVVQ
GQKNLRLNQGDELVQVQGIVRDADIAPDNTIPSSKVAEARIAYGGRGAIAQSNAMGWLSRFFNSRLSPY

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family

Homologues:

Organism=Escherichia coli, GI1787319, Length=202, Percent_Identity=41.0891089108911, Blast_Score=117, Evalue=5e-28,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLGH_XANOM (Q2P2N8)

Other databases:

- EMBL:   AP008229
- RefSeq:   YP_451463.1
- STRING:   Q2P2N8
- GeneID:   3859001
- GenomeReviews:   AP008229_GR
- KEGG:   xom:XOO_2434
- eggNOG:   COG2063
- HOGENOM:   HBG507455
- OMA:   IDYDKIA
- PhylomeDB:   Q2P2N8
- ProtClustDB:   PRK00249
- BioCyc:   XORY342109:XOO2434-MONOMER
- HAMAP:   MF_00415
- InterPro:   IPR000527
- PRINTS:   PR01008

Pfam domain/function: PF02107 FlgH

EC number: NA

Molecular weight: Translated: 23783; Mature: 23652

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRPPLLSSACLAATCSLLLGGCVAAGDVRPYAAMAPIVPVVAPTVQPTAGAIYAAGPGL
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCC
NLYGDRRARDVGDLLTITLIESTTASSSANTSTSKKDATTMASPTLLGAPLTVAGLDVLQ
CCCCCCHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHH
NTLKGDRAFDGKGNTAQSNRMQGSVTVTVIQRLPNGNLVVQGQKNLRLNQGDELVQVQGI
HHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCCCEEEEEHH
VRDADIAPDNTIPSSKVAEARIAYGGRGAIAQSNAMGWLSRFFNSRLSPY
HCCCCCCCCCCCCCCHHHHHHEEECCCCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SRPPLLSSACLAATCSLLLGGCVAAGDVRPYAAMAPIVPVVAPTVQPTAGAIYAAGPGL
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCC
NLYGDRRARDVGDLLTITLIESTTASSSANTSTSKKDATTMASPTLLGAPLTVAGLDVLQ
CCCCCCHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHH
NTLKGDRAFDGKGNTAQSNRMQGSVTVTVIQRLPNGNLVVQGQKNLRLNQGDELVQVQGI
HHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCCCEEEEEHH
VRDADIAPDNTIPSSKVAEARIAYGGRGAIAQSNAMGWLSRFFNSRLSPY
HCCCCCCCCCCCCCCHHHHHHEEECCCCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA