| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is flgE [H]
Identifier: 84624088
GI number: 84624088
Start: 2702481
End: 2703704
Strand: Direct
Name: flgE [H]
Synonym: XOO_2431
Alternate gene names: 84624088
Gene position: 2702481-2703704 (Clockwise)
Preceding gene: 84624087
Following gene: 84624089
Centisome position: 54.7
GC content: 63.48
Gene sequence:
>1224_bases ATGGCTTTCAATACCTCTTTGTCCGGCATCAGCGCAGCCAATGCCGATCTGAACGTTACGTCCAACAACATCGCCAACGT CAACACGACTGGGTTCAAGGAATCGCGCGCCGAGTTTGCCGACATGTTCCAGAGCACCAGCTACGGCCTGTCGCGCAATG CGGTGGGTTCGGGCGTGCGCGTCAGCAACGTGGCGCAGCAGTTTTCGCAGGGCAATATCGATCCGACCGGGCGCAGCCTG GACCTGGCGATTTCCGGCGAAGGCTTCTTCACTGTTTCGTCCAATGGCGCCAAGATGTACACCCGCGCCGGCAACTTCCA GACCGATGCCAACGGCTATGTGGTCAACCCGCAGGGCGCACGCCTGCAGGTGTTCGCACCCAACCCCAGCGGCAACGGTT TTGACGTGGGCCGCCTGTCGGACCTGCAGTTGCTGACCACCGACAGCCCGCCCAAGTCCACCTCCACGGTCAACCTGGCC TTTACCCTGCCCGGCAATGCCACCGCGCCGACGGTGACCCCGTTCAACCCGGCCGACGACAAGACCTATAGCCACTCCAC CGGCGGCATCAACGTCTATGACTCGCTGGGCGTCAGCCATGTGCAGACCTCCTACTTCGTCAAGACCGCCAACCCGAACG AGTGGCAGGTGCACAACTATGTGGACGGCGCCGCCGTCGGTTCCCCGACCACGCTGCAGTTCTCCGATACCGGCGCGTTG ACCACCCCGGCCAACGGCATCATCGCGATGGCCCCGTTCACCCCGAGCACCGGCGCGGGCGTGCTGAGCATGCAGCTCAA TGTCAGCGGCTCCACCCAGTACGGTGAGCAGTTCGCCCTGCGCGACACGCGCCAGGACGGCTACGCCAGCGGCAAGCTCA ACGAGATCAGCATCGACACCAGCGGTGTCGTGTTCGCGCGCTATTCCAACGGTGCCGACAAGCCGCTGGGCCAGGTCGCC CTGAGCAGCTTCGTCAACCCGCAGGGCCTGCAGTCGCAGGGCAACAACATGTGGGCCGAGAGCTACACCTCCGGTGCCGC CCGCACCAGCGCGCCAGGCACCTCGGACCTGGGCCAGATCGAATCGGGCTCGCTGGAATCGTCCACGGTCGACCTGACCG AGCAGCTGGTCAACATGATCGTGGCCCAGCGCAACTTTCAGGCCAACTCGCAGATGATCTCGACGCAGGATCAGGTCACC CAGACGATCATCAATATTCGTTAA
Upstream 100 bases:
>100_bases GACGGCTTGTATCTCAACCTGACCGGGCTAGGCACTTCCCCGCTCGCCAACGTGCTCCGCATCAGCTGAGCCGGCAACCG ACACTTAAAGGACCTCATCC
Downstream 100 bases:
>100_bases AAGTCGGGAATGGTGATTCGGGATTAGGGATTCGCAAGAGCCGGTACTCCGTCAATCGGTGACCGGCCCTGCCCCGCTCA ATTCCCGAGTCGCAACAGCC
Product: flagellar hook protein FlgE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MAFNTSLSGISAANADLNVTSNNIANVNTTGFKESRAEFADMFQSTSYGLSRNAVGSGVRVSNVAQQFSQGNIDPTGRSL DLAISGEGFFTVSSNGAKMYTRAGNFQTDANGYVVNPQGARLQVFAPNPSGNGFDVGRLSDLQLLTTDSPPKSTSTVNLA FTLPGNATAPTVTPFNPADDKTYSHSTGGINVYDSLGVSHVQTSYFVKTANPNEWQVHNYVDGAAVGSPTTLQFSDTGAL TTPANGIIAMAPFTPSTGAGVLSMQLNVSGSTQYGEQFALRDTRQDGYASGKLNEISIDTSGVVFARYSNGADKPLGQVA LSSFVNPQGLQSQGNNMWAESYTSGAARTSAPGTSDLGQIESGSLESSTVDLTEQLVNMIVAQRNFQANSQMISTQDQVT QTIINIR
Sequences:
>Translated_407_residues MAFNTSLSGISAANADLNVTSNNIANVNTTGFKESRAEFADMFQSTSYGLSRNAVGSGVRVSNVAQQFSQGNIDPTGRSL DLAISGEGFFTVSSNGAKMYTRAGNFQTDANGYVVNPQGARLQVFAPNPSGNGFDVGRLSDLQLLTTDSPPKSTSTVNLA FTLPGNATAPTVTPFNPADDKTYSHSTGGINVYDSLGVSHVQTSYFVKTANPNEWQVHNYVDGAAVGSPTTLQFSDTGAL TTPANGIIAMAPFTPSTGAGVLSMQLNVSGSTQYGEQFALRDTRQDGYASGKLNEISIDTSGVVFARYSNGADKPLGQVA LSSFVNPQGLQSQGNNMWAESYTSGAARTSAPGTSDLGQIESGSLESSTVDLTEQLVNMIVAQRNFQANSQMISTQDQVT QTIINIR >Mature_406_residues AFNTSLSGISAANADLNVTSNNIANVNTTGFKESRAEFADMFQSTSYGLSRNAVGSGVRVSNVAQQFSQGNIDPTGRSLD LAISGEGFFTVSSNGAKMYTRAGNFQTDANGYVVNPQGARLQVFAPNPSGNGFDVGRLSDLQLLTTDSPPKSTSTVNLAF TLPGNATAPTVTPFNPADDKTYSHSTGGINVYDSLGVSHVQTSYFVKTANPNEWQVHNYVDGAAVGSPTTLQFSDTGALT TPANGIIAMAPFTPSTGAGVLSMQLNVSGSTQYGEQFALRDTRQDGYASGKLNEISIDTSGVVFARYSNGADKPLGQVAL SSFVNPQGLQSQGNNMWAESYTSGAARTSAPGTSDLGQIESGSLESSTVDLTEQLVNMIVAQRNFQANSQMISTQDQVTQ TIINIR
Specific function: Unknown
COG id: COG1749
COG function: function code N; Flagellar hook protein FlgE
Gene ontology:
Cell location: Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787316, Length=418, Percent_Identity=38.5167464114833, Blast_Score=239, Evalue=2e-64, Organism=Escherichia coli, GI1787318, Length=131, Percent_Identity=38.1679389312977, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR011491 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR020013 [H]
Pfam domain/function: PF06429 DUF1078; PF07559 FlaE; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 42713; Mature: 42582
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: PS00588 FLAGELLA_BB_ROD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFNTSLSGISAANADLNVTSNNIANVNTTGFKESRAEFADMFQSTSYGLSRNAVGSGVR CCCCCCCCCCEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC VSNVAQQFSQGNIDPTGRSLDLAISGEGFFTVSSNGAKMYTRAGNFQTDANGYVVNPQGA HHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCEEEEECCCCEECCCCEEECCCCC RLQVFAPNPSGNGFDVGRLSDLQLLTTDSPPKSTSTVNLAFTLPGNATAPTVTPFNPADD EEEEECCCCCCCCEECCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCEECCCCCCCC KTYSHSTGGINVYDSLGVSHVQTSYFVKTANPNEWQVHNYVDGAAVGSPTTLQFSDTGAL CCCCCCCCCEEEHHCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCEEEECCCCCE TTPANGIIAMAPFTPSTGAGVLSMQLNVSGSTQYGEQFALRDTRQDGYASGKLNEISIDT ECCCCCEEEECCCCCCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEECC SGVVFARYSNGADKPLGQVALSSFVNPQGLQSQGNNMWAESYTSGAARTSAPGTSDLGQI CCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCEEHHHCCCCCCCCCCCCCCCCCCC ESGSLESSTVDLTEQLVNMIVAQRNFQANSQMISTQDQVTQTIINIR CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHCCC >Mature Secondary Structure AFNTSLSGISAANADLNVTSNNIANVNTTGFKESRAEFADMFQSTSYGLSRNAVGSGVR CCCCCCCCCEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC VSNVAQQFSQGNIDPTGRSLDLAISGEGFFTVSSNGAKMYTRAGNFQTDANGYVVNPQGA HHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCEEEEECCCCEECCCCEEECCCCC RLQVFAPNPSGNGFDVGRLSDLQLLTTDSPPKSTSTVNLAFTLPGNATAPTVTPFNPADD EEEEECCCCCCCCEECCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCEECCCCCCCC KTYSHSTGGINVYDSLGVSHVQTSYFVKTANPNEWQVHNYVDGAAVGSPTTLQFSDTGAL CCCCCCCCCEEEHHCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCEEEECCCCCE TTPANGIIAMAPFTPSTGAGVLSMQLNVSGSTQYGEQFALRDTRQDGYASGKLNEISIDT ECCCCCEEEECCCCCCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEECC SGVVFARYSNGADKPLGQVALSSFVNPQGLQSQGNNMWAESYTSGAARTSAPGTSDLGQI CCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCEEHHHCCCCCCCCCCCCCCCCCCC ESGSLESSTVDLTEQLVNMIVAQRNFQANSQMISTQDQVTQTIINIR CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503 [H]