| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84624064
Identifier: 84624064
GI number: 84624064
Start: 2677443
End: 2678564
Strand: Direct
Name: 84624064
Synonym: XOO_2407
Alternate gene names: NA
Gene position: 2677443-2678564 (Clockwise)
Preceding gene: 84624063
Following gene: 84624065
Centisome position: 54.2
GC content: 64.44
Gene sequence:
>1122_bases ATGACGGTGTCCGCTCGCTGGTGCCGCCACCTGCACGAACTTTCGGCTGGCGCCTGGGATGCACTGCACGATGGCACGCA TCCATTCATCAGCTACGCATTTCTGCAAGGCCTGGAACGCGAGGGCTGCCTGCGCCCGGATTGGGGCTGGAATCCGCTGC ACCTGACCGTGTGGGAGGGCGACACCCTGGTGGCCGCGGCTCCCGGTTACCTCAAGAACAACTCGCACGGCGAGTTCGTG TTCGACCACGCCTGGGCGCATGCGTACGCGCGCTACGGGCAGGAGTATTTCCCCAAGTGGCTGTGCGGGGTGCCCTACTC GCCAGTCACCGGCCCGCGTCTGCTCGGTGCGCCCAAGTGGCGCCGCCACCTGCTGAACGCGATGCGCGAGCTGGTGGAGC GCAGCGGCTTGTCGTCGGCGCATGTGAACTTTTATCTTGAAAATGAAGATGCCGCCTTCGATGCCGACTGGCTGGAGCGC AACGACCTGCAATACCACTGGCACAACGCCAGCGGTTGGAGCGATTTCGAGACGTTCCTGGCGGCGATGGATCACAAGCA TCGCAAGAACATCCGACAGGAACGCGCCAAGGTGCAGCGTGCCGGCGTGCAACTGCGTGTGGTGCACGGTGATGAGGCCA GCGGTGCGGATCTGGCCGCGATGTACGACTTCTATCTCAAGACGTTCAATGCGTACGGCAACTCGCCCGCGCTGACGCCA GAGTTCCTGCGCCACCTCGCGCAGCATCTGCCACGCAAGCTGGTGATGTTTCTGGCCGAGCTTGACGGGAAACAGATCGC CGGTGCATTGTGCCTGCGCGGCCACGACACGTTGTACGGTCGCTACTGGGGCGGCGAAGCGCTGCCCGGTCTCCATTTCG AAACCTGTTACTACCAGGGCATCGAATATTGCCTGCGCGAAGGCCTGACCCGCTTCGAGCCTGGCGCACAAGGCCAGCAC AAGATCGCGCGCGGCTTCCTGCCGACGCTGGTGCGTAGTCGCCACTGGATTGCCGATCCAGGCTTCCGCGAGCCGCTGGG CGACTGGTGCGCACAGGAGCGGGCCGAGGTCGAGCGGCACGCCGCCACCCTGCTGCGACATTCGCCGTTCCGCCAAGAGT GA
Upstream 100 bases:
>100_bases GGCCGCGCTGGATGCCGAGCGCTTCCTCGACAAGAGCGCCTGAGATGGTGCCTGATTGCCGGCCGCGCCAAGCGGCCAGC ATCGCCGGCGGGCTCACCAC
Downstream 100 bases:
>100_bases TCGCCCCTGCGGCGGGTTCTTCACCCATCCCGGGACGGTACAGCCCCCTGACGCCGCACCAATCCCGGCAGCGCCGGACA TGTGCCAGCCTTCTGCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MTVSARWCRHLHELSAGAWDALHDGTHPFISYAFLQGLEREGCLRPDWGWNPLHLTVWEGDTLVAAAPGYLKNNSHGEFV FDHAWAHAYARYGQEYFPKWLCGVPYSPVTGPRLLGAPKWRRHLLNAMRELVERSGLSSAHVNFYLENEDAAFDADWLER NDLQYHWHNASGWSDFETFLAAMDHKHRKNIRQERAKVQRAGVQLRVVHGDEASGADLAAMYDFYLKTFNAYGNSPALTP EFLRHLAQHLPRKLVMFLAELDGKQIAGALCLRGHDTLYGRYWGGEALPGLHFETCYYQGIEYCLREGLTRFEPGAQGQH KIARGFLPTLVRSRHWIADPGFREPLGDWCAQERAEVERHAATLLRHSPFRQE
Sequences:
>Translated_373_residues MTVSARWCRHLHELSAGAWDALHDGTHPFISYAFLQGLEREGCLRPDWGWNPLHLTVWEGDTLVAAAPGYLKNNSHGEFV FDHAWAHAYARYGQEYFPKWLCGVPYSPVTGPRLLGAPKWRRHLLNAMRELVERSGLSSAHVNFYLENEDAAFDADWLER NDLQYHWHNASGWSDFETFLAAMDHKHRKNIRQERAKVQRAGVQLRVVHGDEASGADLAAMYDFYLKTFNAYGNSPALTP EFLRHLAQHLPRKLVMFLAELDGKQIAGALCLRGHDTLYGRYWGGEALPGLHFETCYYQGIEYCLREGLTRFEPGAQGQH KIARGFLPTLVRSRHWIADPGFREPLGDWCAQERAEVERHAATLLRHSPFRQE >Mature_372_residues TVSARWCRHLHELSAGAWDALHDGTHPFISYAFLQGLEREGCLRPDWGWNPLHLTVWEGDTLVAAAPGYLKNNSHGEFVF DHAWAHAYARYGQEYFPKWLCGVPYSPVTGPRLLGAPKWRRHLLNAMRELVERSGLSSAHVNFYLENEDAAFDADWLERN DLQYHWHNASGWSDFETFLAAMDHKHRKNIRQERAKVQRAGVQLRVVHGDEASGADLAAMYDFYLKTFNAYGNSPALTPE FLRHLAQHLPRKLVMFLAELDGKQIAGALCLRGHDTLYGRYWGGEALPGLHFETCYYQGIEYCLREGLTRFEPGAQGQHK IARGFLPTLVRSRHWIADPGFREPLGDWCAQERAEVERHAATLLRHSPFRQE
Specific function: Unknown
COG id: COG3146
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42788; Mature: 42656
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSARWCRHLHELSAGAWDALHDGTHPFISYAFLQGLEREGCLRPDWGWNPLHLTVWEG CCCCHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECC DTLVAAAPGYLKNNSHGEFVFDHAWAHAYARYGQEYFPKWLCGVPYSPVTGPRLLGAPKW CEEEEECCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCHH RRHLLNAMRELVERSGLSSAHVNFYLENEDAAFDADWLERNDLQYHWHNASGWSDFETFL HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHCCCCCEEEECCCCCHHHHHHHH AAMDHKHRKNIRQERAKVQRAGVQLRVVHGDEASGADLAAMYDFYLKTFNAYGNSPALTP HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCH EFLRHLAQHLPRKLVMFLAELDGKQIAGALCLRGHDTLYGRYWGGEALPGLHFETCYYQG HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHH IEYCLREGLTRFEPGAQGQHKIARGFLPTLVRSRHWIADPGFREPLGDWCAQERAEVERH HHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH AATLLRHSPFRQE HHHHHHCCCCCCC >Mature Secondary Structure TVSARWCRHLHELSAGAWDALHDGTHPFISYAFLQGLEREGCLRPDWGWNPLHLTVWEG CCCHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECC DTLVAAAPGYLKNNSHGEFVFDHAWAHAYARYGQEYFPKWLCGVPYSPVTGPRLLGAPKW CEEEEECCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCHH RRHLLNAMRELVERSGLSSAHVNFYLENEDAAFDADWLERNDLQYHWHNASGWSDFETFL HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHCCCCCEEEECCCCCHHHHHHHH AAMDHKHRKNIRQERAKVQRAGVQLRVVHGDEASGADLAAMYDFYLKTFNAYGNSPALTP HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCH EFLRHLAQHLPRKLVMFLAELDGKQIAGALCLRGHDTLYGRYWGGEALPGLHFETCYYQG HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHH IEYCLREGLTRFEPGAQGQHKIARGFLPTLVRSRHWIADPGFREPLGDWCAQERAEVERH HHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH AATLLRHSPFRQE HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA