| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is crcB [H]
Identifier: 84624056
GI number: 84624056
Start: 2664292
End: 2664699
Strand: Direct
Name: crcB [H]
Synonym: XOO_2399
Alternate gene names: 84624056
Gene position: 2664292-2664699 (Clockwise)
Preceding gene: 84624055
Following gene: 84624057
Centisome position: 53.93
GC content: 61.27
Gene sequence:
>408_bases GTGACACCAATCTATACCATCGCCGCCATTTCGCTGGGCGCCAGTCTGGGAGCGCTGGCTCGATACGGGCTAGGCCTGGC TCTCAACGCCATCTTCCCTCCGCTGCCGATCGGAACACTCGCAGCAAATCTCATCGCCGCCTATGTGGTCGGCGTGACCA TCGCCTATGTCGGCACCGTACCCGGTCTTTCGCCGCTGTGGCGTCTGTTTATGATCACCGGCCTGGCGGGAGGGCTGTCC ACGTTCTCCACCTTTACTGCCGAGTTGTTTTCGCTGCTGCGTGAAGGAAGGCTTGGGATGTCGGCCGGCATGCTCGGCCT GCACGTCGGCGGCTCGCTCGCGTTGCTGATGCTGGGCATGCTGACCATTGGCCTGTTGCGCAAGTCATCATTGGGAATTG CCGAATGA
Upstream 100 bases:
>100_bases TTGGATGCGCATCGCGACGAGCTACGAGATGTGCGCGCAGTGCTGTTGTGCTGCTGCGAAATTCGCTGACACACTACAGA CCAAGCCCCGGAGAAGCCAT
Downstream 100 bases:
>100_bases AGGGTTATCAACTTACGTTTTTCACCAGCCAAGGTGCCCGCCATGGGCATGCAGCGCTCTGCGACTGGGTATTGGAAACC GCACGCGACTGTGGTGCCAG
Product: camphor resistance protein CrcB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MTPIYTIAAISLGASLGALARYGLGLALNAIFPPLPIGTLAANLIAAYVVGVTIAYVGTVPGLSPLWRLFMITGLAGGLS TFSTFTAELFSLLREGRLGMSAGMLGLHVGGSLALLMLGMLTIGLLRKSSLGIAE
Sequences:
>Translated_135_residues MTPIYTIAAISLGASLGALARYGLGLALNAIFPPLPIGTLAANLIAAYVVGVTIAYVGTVPGLSPLWRLFMITGLAGGLS TFSTFTAELFSLLREGRLGMSAGMLGLHVGGSLALLMLGMLTIGLLRKSSLGIAE >Mature_134_residues TPIYTIAAISLGASLGALARYGLGLALNAIFPPLPIGTLAANLIAAYVVGVTIAYVGTVPGLSPLWRLFMITGLAGGLST FSTFTAELFSLLREGRLGMSAGMLGLHVGGSLALLMLGMLTIGLLRKSSLGIAE
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family [H]
Homologues:
Organism=Escherichia coli, GI1786842, Length=107, Percent_Identity=38.3177570093458, Blast_Score=86, Evalue=7e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003691 [H]
Pfam domain/function: PF02537 CRCB [H]
EC number: NA
Molecular weight: Translated: 13751; Mature: 13620
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPIYTIAAISLGASLGALARYGLGLALNAIFPPLPIGTLAANLIAAYVVGVTIAYVGTV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC PGLSPLWRLFMITGLAGGLSTFSTFTAELFSLLREGRLGMSAGMLGLHVGGSLALLMLGM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCHHHHHCCHHHHHHHHHH LTIGLLRKSSLGIAE HHHHHHHHCCCCCCC >Mature Secondary Structure TPIYTIAAISLGASLGALARYGLGLALNAIFPPLPIGTLAANLIAAYVVGVTIAYVGTV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC PGLSPLWRLFMITGLAGGLSTFSTFTAELFSLLREGRLGMSAGMLGLHVGGSLALLMLGM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCHHHHHCCHHHHHHHHHH LTIGLLRKSSLGIAE HHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA