Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is 84624025

Identifier: 84624025

GI number: 84624025

Start: 2628621

End: 2629652

Strand: Direct

Name: 84624025

Synonym: XOO_2368

Alternate gene names: NA

Gene position: 2628621-2629652 (Clockwise)

Preceding gene: 84624024

Following gene: 84624031

Centisome position: 53.21

GC content: 62.89

Gene sequence:

>1032_bases
ATGATGAAGAGAGACGGACGCTTGGTATCGCGGGCGGCGCTGGAAGAAATGTGCCTGATGGCGTTGCAACGGATGGGCGA
AGGCGAATCGCCGGCCGAAGTGGCCTCGTCGTTCGGGTTGCATCGCGGCTGGGCCTACAAAGTGCTGGCGCGAGCACAGG
AGGGCGGCGCTGGCGCATTGATGACGCGTAAGGGCAGCGGTCGCCCGCGGACGTTGACGCCGGCGCAGGAGCGCCAGGTG
TTCGGCTGGGTCAATGGTAAGAACCCTCGCCAGCATGGCTTCGACTTCGGTCTGTGGACGCGGCAGGTCGTGCGTGAACT
GATCGAGAAGAAATGTGCCGCACGGTTGAGTCTGGCCAGCGTCGGGACGTTGCTGGCGCGGCTGGGGCTGAGCCCACAGA
AGCCGCTGCAACACGCCTATCAGCGCGATCCACTGGCGGTAGCACAGTGGGAAAAGCAGACTTACCCGGCGATCGTGACG
CACGCCAAGCAGGAAAAGGCCGAGATTGACTTCTGGGACGAGTCTGGCTTCCGTGCCGATGCGGTGCAAGGACGGACGTG
GGCCTTCAAGGGCGTCACGCCGGTTGTCGCGGTGCCGGGGCAGCGCCAGAGCATCAGTGCGGCCTCGGCGGTGAACAGCA
AGGGCGGGTTCTGGTTCGCCGTGTACAGCGGCGGCTTGAACGGTGAATTGTTCGTGGACCTGCTCAAGCGAATGATGAAA
GGCCGTCGCCGTCCAATCCATCTGGTGCTTGATGGTTTGCCTGCTCACAAGACCCGTGGCGTGCGCGATGACGTGGACAG
CCTGAAGGGCAGGCTGACGCTGCATTTCCTGCCGGGTGACGCGCCGGACTTGAATCCCGACGAGTTGGTGTGGAGCTACA
CCAAGCGCACGGGCGTGGCGCGCAGCCCGCTGCGCAGTGGCGAGAAGCTGGCCGATCGGGTGCATGATCAGTTGTCCGAC
ATTGCAGCTCGACCAGAATTGGTGCGCTCGTTCTTCAGGCATTCAAGTGTCGCCTATATTTCTGACTTATGA

Upstream 100 bases:

>100_bases
GTTCTTTCAGCCAGGACCCCATGGCGGCCTGGCATTGGGCCGGTTTAGCGATAAGCGCGGAGGTGCTGCAGCTGAAGGTC
AGGGCTAATCAGGACCATCC

Downstream 100 bases:

>100_bases
GTAATCCTATAGATTCGCTTTCGAGCCAATTCCCCCATCCAACTGCACTTGCGCCTTGCCCACCGGGTTACGCGGGTCGC
TGCCGCCGCTGAGCACGTTG

Product: ISXoo2 transposase

Products: NA

Alternate protein names: Transposase And Inactivated Derivatives; ISXo7 Transposase; Helix-Turn-Helix Type; Integrase Catalytic Region; ISXoo2 Transposase; Transposase And Inactivated Derivatives-Like Protein; Transposase IS; Transposase Of IS; Cation Diffusion Facilitator Family Transporter; Isxo7 Transposase; Transposase Fragmentary Gene

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MMKRDGRLVSRAALEEMCLMALQRMGEGESPAEVASSFGLHRGWAYKVLARAQEGGAGALMTRKGSGRPRTLTPAQERQV
FGWVNGKNPRQHGFDFGLWTRQVVRELIEKKCAARLSLASVGTLLARLGLSPQKPLQHAYQRDPLAVAQWEKQTYPAIVT
HAKQEKAEIDFWDESGFRADAVQGRTWAFKGVTPVVAVPGQRQSISAASAVNSKGGFWFAVYSGGLNGELFVDLLKRMMK
GRRRPIHLVLDGLPAHKTRGVRDDVDSLKGRLTLHFLPGDAPDLNPDELVWSYTKRTGVARSPLRSGEKLADRVHDQLSD
IAARPELVRSFFRHSSVAYISDL

Sequences:

>Translated_343_residues
MMKRDGRLVSRAALEEMCLMALQRMGEGESPAEVASSFGLHRGWAYKVLARAQEGGAGALMTRKGSGRPRTLTPAQERQV
FGWVNGKNPRQHGFDFGLWTRQVVRELIEKKCAARLSLASVGTLLARLGLSPQKPLQHAYQRDPLAVAQWEKQTYPAIVT
HAKQEKAEIDFWDESGFRADAVQGRTWAFKGVTPVVAVPGQRQSISAASAVNSKGGFWFAVYSGGLNGELFVDLLKRMMK
GRRRPIHLVLDGLPAHKTRGVRDDVDSLKGRLTLHFLPGDAPDLNPDELVWSYTKRTGVARSPLRSGEKLADRVHDQLSD
IAARPELVRSFFRHSSVAYISDL
>Mature_343_residues
MMKRDGRLVSRAALEEMCLMALQRMGEGESPAEVASSFGLHRGWAYKVLARAQEGGAGALMTRKGSGRPRTLTPAQERQV
FGWVNGKNPRQHGFDFGLWTRQVVRELIEKKCAARLSLASVGTLLARLGLSPQKPLQHAYQRDPLAVAQWEKQTYPAIVT
HAKQEKAEIDFWDESGFRADAVQGRTWAFKGVTPVVAVPGQRQSISAASAVNSKGGFWFAVYSGGLNGELFVDLLKRMMK
GRRRPIHLVLDGLPAHKTRGVRDDVDSLKGRLTLHFLPGDAPDLNPDELVWSYTKRTGVARSPLRSGEKLADRVHDQLSD
IAARPELVRSFFRHSSVAYISDL

Specific function: Unknown

COG id: COG3335

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38035; Mature: 38035

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKRDGRLVSRAALEEMCLMALQRMGEGESPAEVASSFGLHRGWAYKVLARAQEGGAGAL
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCEE
MTRKGSGRPRTLTPAQERQVFGWVNGKNPRQHGFDFGLWTRQVVRELIEKKCAARLSLAS
EEECCCCCCCCCCCHHHCCEEEEECCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VGTLLARLGLSPQKPLQHAYQRDPLAVAQWEKQTYPAIVTHAKQEKAEIDFWDESGFRAD
HHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHCCCCHHHHHCHHHCCCCEEECCCCCCCC
AVQGRTWAFKGVTPVVAVPGQRQSISAASAVNSKGGFWFAVYSGGLNGELFVDLLKRMMK
CCCCCEEEECCCCCEEECCCCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHH
GRRRPIHLVLDGLPAHKTRGVRDDVDSLKGRLTLHFLPGDAPDLNPDELVWSYTKRTGVA
CCCCCEEEEEECCCCHHCCCCHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCH
RSPLRSGEKLADRVHDQLSDIAARPELVRSFFRHSSVAYISDL
HCHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHCCC
>Mature Secondary Structure
MMKRDGRLVSRAALEEMCLMALQRMGEGESPAEVASSFGLHRGWAYKVLARAQEGGAGAL
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCEE
MTRKGSGRPRTLTPAQERQVFGWVNGKNPRQHGFDFGLWTRQVVRELIEKKCAARLSLAS
EEECCCCCCCCCCCHHHCCEEEEECCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VGTLLARLGLSPQKPLQHAYQRDPLAVAQWEKQTYPAIVTHAKQEKAEIDFWDESGFRAD
HHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHCCCCHHHHHCHHHCCCCEEECCCCCCCC
AVQGRTWAFKGVTPVVAVPGQRQSISAASAVNSKGGFWFAVYSGGLNGELFVDLLKRMMK
CCCCCEEEECCCCCEEECCCCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHH
GRRRPIHLVLDGLPAHKTRGVRDDVDSLKGRLTLHFLPGDAPDLNPDELVWSYTKRTGVA
CCCCCEEEEEECCCCHHCCCCHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCH
RSPLRSGEKLADRVHDQLSDIAARPELVRSFFRHSSVAYISDL
HCHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA