| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is pstS [H]
Identifier: 84623991
GI number: 84623991
Start: 2595232
End: 2596323
Strand: Direct
Name: pstS [H]
Synonym: XOO_2334
Alternate gene names: 84623991
Gene position: 2595232-2596323 (Clockwise)
Preceding gene: 84623990
Following gene: 84623992
Centisome position: 52.53
GC content: 65.11
Gene sequence:
>1092_bases ATGAAACTGCAGTCGGCCAGCCTGACCGCCCTGTCCCTCACCATCGCCCTCGCCCTGGCCGCGTGTTCGCCCGGCAAGGA CGCACAGTCCGGCGACGCCGCAAAGGGCGCGCCGACCGCAGGCGCTACCGCCAGCGACACCAAGGGTGCTGAAATCTCCG GTGCCGGCGCTTCCTTCATCTACCCGCTGGTGTCCAAGTGGTCGGCCGACTACAACGCCGCCACCGGCAACAAGGTCAAT TACCAGTCGATCGGCTCCGGCGGCGGCATTGCGCAGATCAAGGCCGGCACCGTGGATTTCGGCTCGACCGACAAGCCGCT GGACAGCGCCGAACTGCAGCAGGCCGGCCTGGGCCAGTTCCCGTCCGCCATCGGCGGCGTGGTGCCGGTGGTCAATCTGG ACGGCATCGCACCGGGCAAGCTGCGCCTGACCGGCGCCTTGCTGGGCGACATCTTCCTGGGCAAGGTCACGATGTGGAAC GACGCGGCCATTGTCGCGGCCAACCCGGGCGTGACCCTGCCGGCCACCAAGATCAATCTGGTGCATCGTTCGGACGGTTC GGGCACCACCTTCAACTTCTCCAACTACCTGTCCAAGGTCAGCCCGGAGTGGAAGAGCAAGGTCGGCGAAGGTACCTCGG TGCAGTGGCCGGGGGGCGTGGGTGGCAAGGGCAACGAAGGCGTTGCCTCGTATGTGCAGCAGATCAAGGGCTCGATCGGT TACGTCGAGCTGGCCTACGCCCTGCAGAACAAGATGCCGTACACCTCGCTGCAGAACGCAGCCGGCCAGTGGATCGAGCC GAACGCGGAAAGCTTTGCCGCCGCCGCTGCCAGCGCCGACTGGGCCAACGCCAAGGACTTCAATCTGGTGATTACCAATG CTCCGGGCGAAAAGGCGTGGCCGATCACCGCCACCAACTTCATGCTGATGCACAAGCAGCCCAAGGACGCGGCGCGCAGC AAGGCGACGCTGGACTTCTTCAAGTGGGCGTTGGAAAACGGCCAGGCCCAGGCCAGCGAACTGCATTACGTGCCGCTGCC GCCGGAGCTGGTGAAGCAGATCGAAGCCTATTGGGGCAGCGAGTTCAAGTAA
Upstream 100 bases:
>100_bases GATGCCTTCGCCATAACCTCCTGTCATGCCGGCGTAACAAAAACATCATTTCATAGTGTGATCTGCCGGATACCCCGGCC AATTCAGCCTCGGAGCCTCC
Downstream 100 bases:
>100_bases TGCCCTGCACCCGCCCATGCGGCGGGCTGCGCTGCGGCGAGGTACCTGAAGGTGCCTCGCCGTTCCTGTTTTCTCACGCT CCCGCCGTTGCGCGGGTGAC
Product: ABC transporter phosphate binding protein
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: PBP [H]
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MKLQSASLTALSLTIALALAACSPGKDAQSGDAAKGAPTAGATASDTKGAEISGAGASFIYPLVSKWSADYNAATGNKVN YQSIGSGGGIAQIKAGTVDFGSTDKPLDSAELQQAGLGQFPSAIGGVVPVVNLDGIAPGKLRLTGALLGDIFLGKVTMWN DAAIVAANPGVTLPATKINLVHRSDGSGTTFNFSNYLSKVSPEWKSKVGEGTSVQWPGGVGGKGNEGVASYVQQIKGSIG YVELAYALQNKMPYTSLQNAAGQWIEPNAESFAAAAASADWANAKDFNLVITNAPGEKAWPITATNFMLMHKQPKDAARS KATLDFFKWALENGQAQASELHYVPLPPELVKQIEAYWGSEFK
Sequences:
>Translated_363_residues MKLQSASLTALSLTIALALAACSPGKDAQSGDAAKGAPTAGATASDTKGAEISGAGASFIYPLVSKWSADYNAATGNKVN YQSIGSGGGIAQIKAGTVDFGSTDKPLDSAELQQAGLGQFPSAIGGVVPVVNLDGIAPGKLRLTGALLGDIFLGKVTMWN DAAIVAANPGVTLPATKINLVHRSDGSGTTFNFSNYLSKVSPEWKSKVGEGTSVQWPGGVGGKGNEGVASYVQQIKGSIG YVELAYALQNKMPYTSLQNAAGQWIEPNAESFAAAAASADWANAKDFNLVITNAPGEKAWPITATNFMLMHKQPKDAARS KATLDFFKWALENGQAQASELHYVPLPPELVKQIEAYWGSEFK >Mature_363_residues MKLQSASLTALSLTIALALAACSPGKDAQSGDAAKGAPTAGATASDTKGAEISGAGASFIYPLVSKWSADYNAATGNKVN YQSIGSGGGIAQIKAGTVDFGSTDKPLDSAELQQAGLGQFPSAIGGVVPVVNLDGIAPGKLRLTGALLGDIFLGKVTMWN DAAIVAANPGVTLPATKINLVHRSDGSGTTFNFSNYLSKVSPEWKSKVGEGTSVQWPGGVGGKGNEGVASYVQQIKGSIG YVELAYALQNKMPYTSLQNAAGQWIEPNAESFAAAAASADWANAKDFNLVITNAPGEKAWPITATNFMLMHKQPKDAARS KATLDFFKWALENGQAQASELHYVPLPPELVKQIEAYWGSEFK
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
Organism=Escherichia coli, GI2367271, Length=314, Percent_Identity=51.2738853503185, Blast_Score=329, Evalue=2e-91,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005673 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 37660; Mature: 37660
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLQSASLTALSLTIALALAACSPGKDAQSGDAAKGAPTAGATASDTKGAEISGAGASFI CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHH YPLVSKWSADYNAATGNKVNYQSIGSGGGIAQIKAGTVDFGSTDKPLDSAELQQAGLGQF HHHHHHHCCCCCCCCCCCCCCEECCCCCCEEEEEECEECCCCCCCCCCHHHHHHCCCCCC PSAIGGVVPVVNLDGIAPGKLRLTGALLGDIFLGKVTMWNDAAIVAANPGVTLPATKINL HHHHCCCEEEEECCCCCCCCEEEHHHHHHHHHHCEEEEECCEEEEEECCCCCCCCEEEEE VHRSDGSGTTFNFSNYLSKVSPEWKSKVGEGTSVQWPGGVGGKGNEGVASYVQQIKGSIG EEECCCCCCEEEHHHHHHHCCCHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCC YVELAYALQNKMPYTSLQNAAGQWIEPNAESFAAAAASADWANAKDFNLVITNAPGEKAW CEEHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCC PITATNFMLMHKQPKDAARSKATLDFFKWALENGQAQASELHYVPLPPELVKQIEAYWGS CEEECEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHCEEECCCCHHHHHHHHHHHCC EFK CCC >Mature Secondary Structure MKLQSASLTALSLTIALALAACSPGKDAQSGDAAKGAPTAGATASDTKGAEISGAGASFI CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHH YPLVSKWSADYNAATGNKVNYQSIGSGGGIAQIKAGTVDFGSTDKPLDSAELQQAGLGQF HHHHHHHCCCCCCCCCCCCCCEECCCCCCEEEEEECEECCCCCCCCCCHHHHHHCCCCCC PSAIGGVVPVVNLDGIAPGKLRLTGALLGDIFLGKVTMWNDAAIVAANPGVTLPATKINL HHHHCCCEEEEECCCCCCCCEEEHHHHHHHHHHCEEEEECCEEEEEECCCCCCCCEEEEE VHRSDGSGTTFNFSNYLSKVSPEWKSKVGEGTSVQWPGGVGGKGNEGVASYVQQIKGSIG EEECCCCCCEEEHHHHHHHCCCHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCC YVELAYALQNKMPYTSLQNAAGQWIEPNAESFAAAAASADWANAKDFNLVITNAPGEKAW CEEHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCC PITATNFMLMHKQPKDAARSKATLDFFKWALENGQAQASELHYVPLPPELVKQIEAYWGS CEEECEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHCEEECCCCHHHHHHHHHHHCC EFK CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]