Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is oprP [H]

Identifier: 84623989

GI number: 84623989

Start: 2592586

End: 2593836

Strand: Direct

Name: oprP [H]

Synonym: XOO_2332

Alternate gene names: 84623989

Gene position: 2592586-2593836 (Clockwise)

Preceding gene: 84623987

Following gene: 84623990

Centisome position: 52.48

GC content: 62.75

Gene sequence:

>1251_bases
ATGAAACTCGCTCCCACCCTGCTTGGTTCCGCGCTGCTGCTGGCACTCGCCGCTCCTGCAGCACACGCCGAAATCGCCAT
CGATGTGATCGGCGGCTCGGAGGTCTCGCTGGAAGGCCTGGTCCAGGCCGACGGCAACTGGTTCCACAACGATGTCCAAG
ACCTCAATGGCGCGATCGGCGCCAATGGTGACAACTCCGAATTCAGCATCCGTCGCGCCGAGCTGGTGCTCAAGGGCAAA
GGCCCGGGCAATGTCGAGTGGGTGCTGGGTTACGATCCGAGCGTTCTGAAGCAGGTGACCATCAAAGGCACCACCGTCAA
CAGCACCGGCCGTTTCCTGGATAACAACGTCAAGTACAAGTTCGGCGGCAACGCGAACAACTATCTGCAGATCGGTCAGT
TCAAGCAGCCCAACAGCCTGGAAGAACTGTCCAGCACCAAGAACAACGATTTCGTCTCCAAGGCGTCGGTGACCAACACC
TACGGCATCTCGCGCCGTCTGGGCGTGGCCTATGGCATGGGCGACACCAACTGGAGCGTGACCGCCAGTGCGTTCGGCCG
CGAGTTGACCCGCAACCAGGCCCACGGCAGCGGCTATGGCGCGCGCGGCACCTGGGCGCCGATCAACGAGACCGGCAACG
TGCTGCACTTCGGCCTCAGCTACCTGGCCTACGACACCGACGACGATAGCTTGCGCCTGCGCGCACGTCCGGACGCCGAC
CTGGCCACCGTTCGCCTGATCGACAGCGGCGCCATAACCAATGTCGACAACGTCGGTGTTGCCGGTGCCGAGGCGATGTG
GATCACCGGGCCGTTCAAGGTGCAGAGCGAGTATTTCCAGGAAAACGCCAATCGCATCGGCGCCAACGCACACGACTATA
AGAGTGATGGCTGGTACGTCAGCGGCGTCTGGAACATCACCGGCGAAACCTGGGGCTACAAGGCCGGCGTGCCGACCACC
CCGCTGCCCAACGAGCCGGCCTCGGGCATGTGGCAGCTGGCAGTGCGCTACGACACCCTGGACCTCAACGACGGCCACTT
GGTGGCCAACGGCAACACGCCGTTCGTCGATGGCGTGCTTGGCGGCAAGATGAACATCTGGACGGTCGGCGCCAACTGGT
ACTGGCGCTCCAACTTCAAGTTCGCCCTCAACTACGCCAAGGTCGACAGCAGCCGCTACAACAGCGCTACACGCGCGCTG
GTCGACGACAACCCGTCGATCATCGAAGCGCGCGCGCAGTTCTACTGGTAA

Upstream 100 bases:

>100_bases
TTTTTGGCAAAAATTGATGATGACGTTGCGGTCGTTTTGTCACATTAACGCAACTTTCACATCATAGCCTGCGCCCACTT
TCTCAGGTCGCAAAGCATCT

Downstream 100 bases:

>100_bases
ACGCATTGCCACCGCGTGCGCTCGGTCGAGCGCACGCGGTGACGGCCGCCACTTCCTTCCGGCCTGAATATCCGACGGCA
CAACGCCGTCATGGCTTTGT

Product: polyphosphate-selective porin O

Products: NA

Alternate protein names: Outer membrane protein D1 [H]

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MKLAPTLLGSALLLALAAPAAHAEIAIDVIGGSEVSLEGLVQADGNWFHNDVQDLNGAIGANGDNSEFSIRRAELVLKGK
GPGNVEWVLGYDPSVLKQVTIKGTTVNSTGRFLDNNVKYKFGGNANNYLQIGQFKQPNSLEELSSTKNNDFVSKASVTNT
YGISRRLGVAYGMGDTNWSVTASAFGRELTRNQAHGSGYGARGTWAPINETGNVLHFGLSYLAYDTDDDSLRLRARPDAD
LATVRLIDSGAITNVDNVGVAGAEAMWITGPFKVQSEYFQENANRIGANAHDYKSDGWYVSGVWNITGETWGYKAGVPTT
PLPNEPASGMWQLAVRYDTLDLNDGHLVANGNTPFVDGVLGGKMNIWTVGANWYWRSNFKFALNYAKVDSSRYNSATRAL
VDDNPSIIEARAQFYW

Sequences:

>Translated_416_residues
MKLAPTLLGSALLLALAAPAAHAEIAIDVIGGSEVSLEGLVQADGNWFHNDVQDLNGAIGANGDNSEFSIRRAELVLKGK
GPGNVEWVLGYDPSVLKQVTIKGTTVNSTGRFLDNNVKYKFGGNANNYLQIGQFKQPNSLEELSSTKNNDFVSKASVTNT
YGISRRLGVAYGMGDTNWSVTASAFGRELTRNQAHGSGYGARGTWAPINETGNVLHFGLSYLAYDTDDDSLRLRARPDAD
LATVRLIDSGAITNVDNVGVAGAEAMWITGPFKVQSEYFQENANRIGANAHDYKSDGWYVSGVWNITGETWGYKAGVPTT
PLPNEPASGMWQLAVRYDTLDLNDGHLVANGNTPFVDGVLGGKMNIWTVGANWYWRSNFKFALNYAKVDSSRYNSATRAL
VDDNPSIIEARAQFYW
>Mature_416_residues
MKLAPTLLGSALLLALAAPAAHAEIAIDVIGGSEVSLEGLVQADGNWFHNDVQDLNGAIGANGDNSEFSIRRAELVLKGK
GPGNVEWVLGYDPSVLKQVTIKGTTVNSTGRFLDNNVKYKFGGNANNYLQIGQFKQPNSLEELSSTKNNDFVSKASVTNT
YGISRRLGVAYGMGDTNWSVTASAFGRELTRNQAHGSGYGARGTWAPINETGNVLHFGLSYLAYDTDDDSLRLRARPDAD
LATVRLIDSGAITNVDNVGVAGAEAMWITGPFKVQSEYFQENANRIGANAHDYKSDGWYVSGVWNITGETWGYKAGVPTT
PLPNEPASGMWQLAVRYDTLDLNDGHLVANGNTPFVDGVLGGKMNIWTVGANWYWRSNFKFALNYAKVDSSRYNSATRAL
VDDNPSIIEARAQFYW

Specific function: Anion specific, the binding site has higher affinity for phosphate than chloride ions. Porin O has a higher affinity for polyphosphates (tripolyphosphate and pyrophosphate) while porin P has a higher affinity for orthophosphate [H]

COG id: COG3746

COG function: function code P; Phosphate-selective porin

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the oprO/oprP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010870 [H]

Pfam domain/function: PF07396 Porin_O_P [H]

EC number: NA

Molecular weight: Translated: 45096; Mature: 45096

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLAPTLLGSALLLALAAPAAHAEIAIDVIGGSEVSLEGLVQADGNWFHNDVQDLNGAIG
CCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCHHHHCCCCCC
ANGDNSEFSIRRAELVLKGKGPGNVEWVLGYDPSVLKQVTIKGTTVNSTGRFLDNNVKYK
CCCCCCCEEEEEEEEEEECCCCCCEEEEEECCHHHEEEEEEECEEECCCCCEECCCEEEE
FGGNANNYLQIGQFKQPNSLEELSSTKNNDFVSKASVTNTYGISRRLGVAYGMGDTNWSV
ECCCCCCEEEECCCCCCCCHHHHHCCCCCCEEEECCCCCCCCCCEECEEEEECCCCCCEE
TASAFGRELTRNQAHGSGYGARGTWAPINETGNVLHFGLSYLAYDTDDDSLRLRARPDAD
EHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCEEEEECCCCC
LATVRLIDSGAITNVDNVGVAGAEAMWITGPFKVQSEYFQENANRIGANAHDYKSDGWYV
EEEEEEECCCCCCCCCCCCCCCCCEEEEECCCEEHHHHHHHHHHHCCCCCCCCCCCCEEE
SGVWNITGETWGYKAGVPTTPLPNEPASGMWQLAVRYDTLDLNDGHLVANGNTPFVDGVL
EEEEECCCCCCCEECCCCCCCCCCCCCCCEEEEEEEEEEEECCCCEEEECCCCCEEEEEC
GGKMNIWTVGANWYWRSNFKFALNYAKVDSSRYNSATRALVDDNPSIIEARAQFYW
CCCEEEEEECCCEEEECCCEEEEEEEECCCCCCCCCEEEEECCCCCEEEEEEECCC
>Mature Secondary Structure
MKLAPTLLGSALLLALAAPAAHAEIAIDVIGGSEVSLEGLVQADGNWFHNDVQDLNGAIG
CCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCHHHHCCCCCC
ANGDNSEFSIRRAELVLKGKGPGNVEWVLGYDPSVLKQVTIKGTTVNSTGRFLDNNVKYK
CCCCCCCEEEEEEEEEEECCCCCCEEEEEECCHHHEEEEEEECEEECCCCCEECCCEEEE
FGGNANNYLQIGQFKQPNSLEELSSTKNNDFVSKASVTNTYGISRRLGVAYGMGDTNWSV
ECCCCCCEEEECCCCCCCCHHHHHCCCCCCEEEECCCCCCCCCCEECEEEEECCCCCCEE
TASAFGRELTRNQAHGSGYGARGTWAPINETGNVLHFGLSYLAYDTDDDSLRLRARPDAD
EHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCEEEEECCCCC
LATVRLIDSGAITNVDNVGVAGAEAMWITGPFKVQSEYFQENANRIGANAHDYKSDGWYV
EEEEEEECCCCCCCCCCCCCCCCCEEEEECCCEEHHHHHHHHHHHCCCCCCCCCCCCEEE
SGVWNITGETWGYKAGVPTTPLPNEPASGMWQLAVRYDTLDLNDGHLVANGNTPFVDGVL
EEEEECCCCCCCEECCCCCCCCCCCCCCCEEEEEEEEEEEECCCCEEEECCCCCEEEEEC
GGKMNIWTVGANWYWRSNFKFALNYAKVDSSRYNSATRALVDDNPSIIEARAQFYW
CCCEEEEEECCCEEEECCCEEEEEEEECCCCCCCCCEEEEECCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1697017; 1406271; 10984043; 2456446; 2451538; 3017428 [H]