| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623930
Identifier: 84623930
GI number: 84623930
Start: 2529130
End: 2529693
Strand: Direct
Name: 84623930
Synonym: XOO_2273
Alternate gene names: NA
Gene position: 2529130-2529693 (Clockwise)
Preceding gene: 84623929
Following gene: 84623931
Centisome position: 51.19
GC content: 67.02
Gene sequence:
>564_bases ATGACGACCGGATACGATCACAACGGTAACCGCGAAAACGCGGCCCAGGGCTTCCAGGCGCAGGCGGAACAGATCTCGCG ACGGCTCGGCGAATCGGCTCAGACCGTGTGGCTGGCCGGACTGGGCGCGCTTGGCCGCGTGCAGAGCGAAGGCGGCAAGC TGTTCGACTCACTGGTGCGCGAAGGCGCCGCCTACGAACGCACCGGGCAGCGCAAGGCGGCCGAAAGCGTTGACGAATTG CGCGGAGAAGTCGAAACCCAGTTCGAACAAGCACGCGACACCGCCATGCGCGGCTGGGACAAGCTGGGCAAGGCCTTCGA CGAGCGCGTCAAAGGCGTACTGCGCACGCTCAACATCCCTGAGCAGGAAGAGCTGGAAAACCTGCGACGCGAGGTCGAAT CGCTCAAGGCCCAGGTGCGTGCCAACACGGCCGCCACCAAGCGTGCCAACCGCACCGCCAACCAGGCGGCGCAAGCAGCC GGCAGCGAGACGCCGGGTGCCAGCGGTGCAGGTGCGGGGGCGGCGACCTCGTCCGGCAACCCCGGTGCGTTCGACCCTGA ATAA
Upstream 100 bases:
>100_bases TGCTGGCAACACGCCTGATCGGGCACCGCTTCACCTGCCCGATGCAGGGCCGGTACTAGGGTGAAGGTAACGTCACTTTG GCAACCTACAGGAGCATCGC
Downstream 100 bases:
>100_bases GCGACGGTAAAAGCAACCGCGCCACCGTCTGGTGGGGCGGTTCTACCGAGCCGGTGAAGGCAGGATGTCCGACGCGCGGG AGGTATTTCGAGCCGGGCAC
Product: poly(hydroxyalcanoate) granule associated protein
Products: NA
Alternate protein names: Poly(Hydroxyalcanoate) Granule Associated Protein; Polyhydroxyalkanoate Synthesis Protein PhaF; Polyhydroxyalkanoate Granule-Associated Protein PhaF; Polyhydroxyalcanoate_granule_associated_protein; Protein Associated With Polyhydroxyalkanoate Inclusion; Polygranule-Associated Protein
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MTTGYDHNGNRENAAQGFQAQAEQISRRLGESAQTVWLAGLGALGRVQSEGGKLFDSLVREGAAYERTGQRKAAESVDEL RGEVETQFEQARDTAMRGWDKLGKAFDERVKGVLRTLNIPEQEELENLRREVESLKAQVRANTAATKRANRTANQAAQAA GSETPGASGAGAGAATSSGNPGAFDPE
Sequences:
>Translated_187_residues MTTGYDHNGNRENAAQGFQAQAEQISRRLGESAQTVWLAGLGALGRVQSEGGKLFDSLVREGAAYERTGQRKAAESVDEL RGEVETQFEQARDTAMRGWDKLGKAFDERVKGVLRTLNIPEQEELENLRREVESLKAQVRANTAATKRANRTANQAAQAA GSETPGASGAGAGAATSSGNPGAFDPE >Mature_186_residues TTGYDHNGNRENAAQGFQAQAEQISRRLGESAQTVWLAGLGALGRVQSEGGKLFDSLVREGAAYERTGQRKAAESVDELR GEVETQFEQARDTAMRGWDKLGKAFDERVKGVLRTLNIPEQEELENLRREVESLKAQVRANTAATKRANRTANQAAQAAG SETPGASGAGAGAATSSGNPGAFDPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19935; Mature: 19804
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTGYDHNGNRENAAQGFQAQAEQISRRLGESAQTVWLAGLGALGRVQSEGGKLFDSLVR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGAAYERTGQRKAAESVDELRGEVETQFEQARDTAMRGWDKLGKAFDERVKGVLRTLNIP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EQEELENLRREVESLKAQVRANTAATKRANRTANQAAQAAGSETPGASGAGAGAATSSGN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC PGAFDPE CCCCCCC >Mature Secondary Structure TTGYDHNGNRENAAQGFQAQAEQISRRLGESAQTVWLAGLGALGRVQSEGGKLFDSLVR CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGAAYERTGQRKAAESVDELRGEVETQFEQARDTAMRGWDKLGKAFDERVKGVLRTLNIP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EQEELENLRREVESLKAQVRANTAATKRANRTANQAAQAAGSETPGASGAGAGAATSSGN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC PGAFDPE CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA