| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is 84623920
Identifier: 84623920
GI number: 84623920
Start: 2519538
End: 2520551
Strand: Direct
Name: 84623920
Synonym: XOO_2263
Alternate gene names: NA
Gene position: 2519538-2520551 (Clockwise)
Preceding gene: 84623916
Following gene: 84623921
Centisome position: 51.0
GC content: 47.93
Gene sequence:
>1014_bases ATGAAAATTCCAGAGAAGTCTCACGTTAAATTTAGCGTGGGAAGATGGGCTGCGGGGCTTGTTTTGATTGCTTCGATTGC AGGGGCTGGCTTTGCTTCTGCTGCTGAGCGAAACCTTGGGACTAGACCTGCAGATGTCCCCGCGGACTACGTGATAACTC CGTTCGGCTATTTTTCGCCTGCGTGCGTTCAGCAGATTCATAGTGGAGACCAGATCACGCTAGATGGCGGAATTCAGCGC ATCACAGGTTCGTTAGAGCAGCGTAAGATCTGTAGCCAGGACAACTTCACGCGCGATGGTGTTCGCGTTAAGCCTGATGG AAGAACTTTGGAAGGTAAGCTAGCTCGAACAATGGACGGGAATTCGGGAGAGCAAACCAAAGCAGTCCACCTCCAAAAAA TTGCACATGATTATCTTGCCTACGGAGGCTATATCACGTCTCAACCGATGGGTAGAATTGTCGCTAGTTGGAATGTCCCG CCAAATCCAAGAGTTCGATCCAATCAGATAATCTATTTCTTCCCGGGAATGCAGGCTGACACAATTATGCAGCCAGTATT ACGCTATCTTGGAAAATCCAACACCTGGGATCTTAGTAGCTGGAATTGCTGCAAAGACGGAACTGTGTTTACTAGTGATT ATATACCTGCAAAGTCTGGCGATCATATTGTTGGTGATACGTACTCTACTTGCAAGTCTGGCGTGGCCTGTAATCGCTGG AATATTGATACGAAAAACATCACCTCGGGACGCAGTGTACGACTAAAAGCTGCTCTTTATGCGAAAATGAAATGGATTTG CGGTGGGGCGCTCGAAGTATACAATGTTGCCCGTTGCGATGAATTTCCGGACGGTGGAATCCTTACGTTTAGCGACATTT CCGTCTATGATCGAAATATGATTCGCGTTTCGTCCCCGCCATGGGATAGCAAGGGGCCTGATGCTGCGGGGCTAACTCCG CAATGCAATTATGGCGCCAAGACAACCGATACTTCAGTTACTGTTTTTTATTGA
Upstream 100 bases:
>100_bases CGCGCACGGTTTGTTCGTAATTGTTGGTGCCTAATTCCGCTGCGGCTGCCGTTCGAGCGGTTCTCGCATAAAAAATAATC ATTTCTTAAATCGGGGTTTT
Downstream 100 bases:
>100_bases GTATTAGTAGCAAATATCATCCTGATTAGCCCCGACCTTCAGCCAGCAGTCGCAGGATCTGCGCCAGGCGGGGTTGATGG TGCCGTCACCTGAAGTCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MKIPEKSHVKFSVGRWAAGLVLIASIAGAGFASAAERNLGTRPADVPADYVITPFGYFSPACVQQIHSGDQITLDGGIQR ITGSLEQRKICSQDNFTRDGVRVKPDGRTLEGKLARTMDGNSGEQTKAVHLQKIAHDYLAYGGYITSQPMGRIVASWNVP PNPRVRSNQIIYFFPGMQADTIMQPVLRYLGKSNTWDLSSWNCCKDGTVFTSDYIPAKSGDHIVGDTYSTCKSGVACNRW NIDTKNITSGRSVRLKAALYAKMKWICGGALEVYNVARCDEFPDGGILTFSDISVYDRNMIRVSSPPWDSKGPDAAGLTP QCNYGAKTTDTSVTVFY
Sequences:
>Translated_337_residues MKIPEKSHVKFSVGRWAAGLVLIASIAGAGFASAAERNLGTRPADVPADYVITPFGYFSPACVQQIHSGDQITLDGGIQR ITGSLEQRKICSQDNFTRDGVRVKPDGRTLEGKLARTMDGNSGEQTKAVHLQKIAHDYLAYGGYITSQPMGRIVASWNVP PNPRVRSNQIIYFFPGMQADTIMQPVLRYLGKSNTWDLSSWNCCKDGTVFTSDYIPAKSGDHIVGDTYSTCKSGVACNRW NIDTKNITSGRSVRLKAALYAKMKWICGGALEVYNVARCDEFPDGGILTFSDISVYDRNMIRVSSPPWDSKGPDAAGLTP QCNYGAKTTDTSVTVFY >Mature_337_residues MKIPEKSHVKFSVGRWAAGLVLIASIAGAGFASAAERNLGTRPADVPADYVITPFGYFSPACVQQIHSGDQITLDGGIQR ITGSLEQRKICSQDNFTRDGVRVKPDGRTLEGKLARTMDGNSGEQTKAVHLQKIAHDYLAYGGYITSQPMGRIVASWNVP PNPRVRSNQIIYFFPGMQADTIMQPVLRYLGKSNTWDLSSWNCCKDGTVFTSDYIPAKSGDHIVGDTYSTCKSGVACNRW NIDTKNITSGRSVRLKAALYAKMKWICGGALEVYNVARCDEFPDGGILTFSDISVYDRNMIRVSSPPWDSKGPDAAGLTP QCNYGAKTTDTSVTVFY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36822; Mature: 36822
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIPEKSHVKFSVGRWAAGLVLIASIAGAGFASAAERNLGTRPADVPADYVITPFGYFSP CCCCCCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCEEECCCCCCCH ACVQQIHSGDQITLDGGIQRITGSLEQRKICSQDNFTRDGVRVKPDGRTLEGKLARTMDG HHHHHHCCCCEEEECCCHHHHHCCHHHHHHHCCCCCCCCCCEECCCCCEECCEEEEECCC NSGEQTKAVHLQKIAHDYLAYGGYITSQPMGRIVASWNVPPNPRVRSNQIIYFFPGMQAD CCCCCHHHHHHHHHHHHHHHHCCEEECCCCCEEEEECCCCCCCCCCCCEEEEEECCCCHH TIMQPVLRYLGKSNTWDLSSWNCCKDGTVFTSDYIPAKSGDHIVGDTYSTCKSGVACNRW HHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEECCCHHHHHCCCEECCC NIDTKNITSGRSVRLKAALYAKMKWICGGALEVYNVARCDEFPDGGILTFSDISVYDRNM CCCCCCCCCCCCEEEEHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEECCEEECCCE IRVSSPPWDSKGPDAAGLTPQCNYGAKTTDTSVTVFY EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC >Mature Secondary Structure MKIPEKSHVKFSVGRWAAGLVLIASIAGAGFASAAERNLGTRPADVPADYVITPFGYFSP CCCCCCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCEEECCCCCCCH ACVQQIHSGDQITLDGGIQRITGSLEQRKICSQDNFTRDGVRVKPDGRTLEGKLARTMDG HHHHHHCCCCEEEECCCHHHHHCCHHHHHHHCCCCCCCCCCEECCCCCEECCEEEEECCC NSGEQTKAVHLQKIAHDYLAYGGYITSQPMGRIVASWNVPPNPRVRSNQIIYFFPGMQAD CCCCCHHHHHHHHHHHHHHHHCCEEECCCCCEEEEECCCCCCCCCCCCEEEEEECCCCHH TIMQPVLRYLGKSNTWDLSSWNCCKDGTVFTSDYIPAKSGDHIVGDTYSTCKSGVACNRW HHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEECCCHHHHHCCCEECCC NIDTKNITSGRSVRLKAALYAKMKWICGGALEVYNVARCDEFPDGGILTFSDISVYDRNM CCCCCCCCCCCCEEEEHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEECCEEECCCE IRVSSPPWDSKGPDAAGLTPQCNYGAKTTDTSVTVFY EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA