| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is czcB [H]
Identifier: 84623912
GI number: 84623912
Start: 2501990
End: 2503105
Strand: Direct
Name: czcB [H]
Synonym: XOO_2255
Alternate gene names: 84623912
Gene position: 2501990-2503105 (Clockwise)
Preceding gene: 84623910
Following gene: 84623913
Centisome position: 50.65
GC content: 66.13
Gene sequence:
>1116_bases ATGTCGTCCCTCTTCCTGCGTTCTACGCTGGCAGCTGCCTGCGTTGGCAGCCTGCTTGCTGGCTGCGGTGCCACCCCGCC ACCGCCGGCTCCCTCGCCGCTGCTCATCCACACCAGCACCCAGGTGAGCGTGCCGGCGCACTCGCCGTTGCGTGCCAGCC TGCGCGTGCAGGCAGTGCGCAGCCAGCCCATCGCCCCCATGGTGCAGATGCCGGCGGTGATCGATGTGTTGCCCGAGCGG CTGGTGCGTGTCGTGCCGCCGTTGGCCGGGCGGGTGGTCGCATTGCCCAAGACCCTGGGCGACACCGTGCGTGCAGGCGA TGTGCTGTGCGTGCTCGATTCCGCCGAACTTGCCACCGCCTACAGCGATGCCGGCAAGGCGCGCGCCACGCTGCAACAAG CGCGCCTGGAACTGGCTCGGCAGAAGGTGCTAGCGGCAGACAGCATTGCAGCAGCACGCGATCTGCAGGCGGCGCAGCAG GCTTTCGACAGCGCGCAGAACGATGCGCGTGCGGCCAGCGATCGTCTGGCCCAGCTGGGTGTGGCCGCACAAGCAACATC GCATCGACGCTATGTCTTGCGTGCGCCCATTGCCGGCCGCGTGGTGGACCTGAGCGCTGCGCTGGGGGGCTTCTGGAACG ACACGTCAGCGCCACTGATGACGGTGGCCGATATCTCGCGGGTCTGGCTGACCGCCAGCGTGCCGGAACGCGAGATCGGC CAGGTCTTCGAAGGGCAGCAGGTCACCGCCAGCCTGGATGCCTACCCGGGCCAACACTTCACCGGCCAGGTACAACACCT GGACGATCTGCTCGACCCCACCACCCGTACGTTGAAGGTCAGGGTGGCATTGAACAACCACGATGGCCTGCTCAAGCCGG GCATGTTCGCGCGCGCCCAGTTTCAAGCACGCCCACAGCAGGCGTTGCTGATTCCCGACAGCGCGCTGTTGCAGATGGGG CTGTATACGCGGGTATTTATCGAAACCGCCCCGTTCGTTTATCGCTCGCGCATTGTCGCCACCGGCCGCGCTGTGGATGG GTCTACCGAAATCCTGTCCGGCTTGAAGGCAGGCGAGCGTGTGGTGATCAAGGACGGAGCCTTGCTCAATGATTGA
Upstream 100 bases:
>100_bases CGGCAGCGAGCGTGTCTGCATCGCCAATGCAAGCGCTGCCCGCTTTCGTGGGTCGCGGACTGCATGTGCAACGCCTTCCC CTCCCCGCTCGAGTCACAGC
Downstream 100 bases:
>100_bases GTCGATCATCACCACCTGCTTCCAGCGTCGCGGCATCGTCTGGCTGGTCTTCGTACTCATTGCGTTATACGGCACATGGA GCTGGACGCAGCTGCCGGTG
Product: cation efflux system protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MSSLFLRSTLAAACVGSLLAGCGATPPPPAPSPLLIHTSTQVSVPAHSPLRASLRVQAVRSQPIAPMVQMPAVIDVLPER LVRVVPPLAGRVVALPKTLGDTVRAGDVLCVLDSAELATAYSDAGKARATLQQARLELARQKVLAADSIAAARDLQAAQQ AFDSAQNDARAASDRLAQLGVAAQATSHRRYVLRAPIAGRVVDLSAALGGFWNDTSAPLMTVADISRVWLTASVPEREIG QVFEGQQVTASLDAYPGQHFTGQVQHLDDLLDPTTRTLKVRVALNNHDGLLKPGMFARAQFQARPQQALLIPDSALLQMG LYTRVFIETAPFVYRSRIVATGRAVDGSTEILSGLKAGERVVIKDGALLND
Sequences:
>Translated_371_residues MSSLFLRSTLAAACVGSLLAGCGATPPPPAPSPLLIHTSTQVSVPAHSPLRASLRVQAVRSQPIAPMVQMPAVIDVLPER LVRVVPPLAGRVVALPKTLGDTVRAGDVLCVLDSAELATAYSDAGKARATLQQARLELARQKVLAADSIAAARDLQAAQQ AFDSAQNDARAASDRLAQLGVAAQATSHRRYVLRAPIAGRVVDLSAALGGFWNDTSAPLMTVADISRVWLTASVPEREIG QVFEGQQVTASLDAYPGQHFTGQVQHLDDLLDPTTRTLKVRVALNNHDGLLKPGMFARAQFQARPQQALLIPDSALLQMG LYTRVFIETAPFVYRSRIVATGRAVDGSTEILSGLKAGERVVIKDGALLND >Mature_370_residues SSLFLRSTLAAACVGSLLAGCGATPPPPAPSPLLIHTSTQVSVPAHSPLRASLRVQAVRSQPIAPMVQMPAVIDVLPERL VRVVPPLAGRVVALPKTLGDTVRAGDVLCVLDSAELATAYSDAGKARATLQQARLELARQKVLAADSIAAARDLQAAQQA FDSAQNDARAASDRLAQLGVAAQATSHRRYVLRAPIAGRVVDLSAALGGFWNDTSAPLMTVADISRVWLTASVPEREIGQ VFEGQQVTASLDAYPGQHFTGQVQHLDDLLDPTTRTLKVRVALNNHDGLLKPGMFARAQFQARPQQALLIPDSALLQMGL YTRVFIETAPFVYRSRIVATGRAVDGSTEILSGLKAGERVVIKDGALLND
Specific function: CzcA and CzcB together would act in zinc efflux nearly as effectively as the complete czc efflux system (CzcABC). The CzcB protein is thought to funnel zinc cations to the CzcA transport protein [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
Organism=Escherichia coli, GI87082036, Length=338, Percent_Identity=28.698224852071, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1786787, Length=175, Percent_Identity=34.2857142857143, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1789929, Length=308, Percent_Identity=26.9480519480519, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI87081796, Length=312, Percent_Identity=28.2051282051282, Blast_Score=62, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005695 - InterPro: IPR006143 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 39316; Mature: 39184
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLFLRSTLAAACVGSLLAGCGATPPPPAPSPLLIHTSTQVSVPAHSPLRASLRVQAVR CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCEEECCCCCCCHHHHHHEEHH SQPIAPMVQMPAVIDVLPERLVRVVPPLAGRVVALPKTLGDTVRAGDVLCVLDSAELATA CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHCCHHCCCCEEEEECCHHHHHH YSDAGKARATLQQARLELARQKVLAADSIAAARDLQAAQQAFDSAQNDARAASDRLAQLG HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAAQATSHRRYVLRAPIAGRVVDLSAALGGFWNDTSAPLMTVADISRVWLTASVPEREIG HHHHHCCCCEEEEECCCCCCEEEHHHHHCCCCCCCCCCEEHHHHHHHEEEECCCCHHHHH QVFEGQQVTASLDAYPGQHFTGQVQHLDDLLDPTTRTLKVRVALNNHDGLLKPGMFARAQ HHHCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCHHHHHH FQARPQQALLIPDSALLQMGLYTRVFIETAPFVYRSRIVATGRAVDGSTEILSGLKAGER HHCCCCCEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHEEECCCCCCHHHHHHHHCCCCE VVIKDGALLND EEEECCCCCCC >Mature Secondary Structure SSLFLRSTLAAACVGSLLAGCGATPPPPAPSPLLIHTSTQVSVPAHSPLRASLRVQAVR CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCEEECCCCCCCHHHHHHEEHH SQPIAPMVQMPAVIDVLPERLVRVVPPLAGRVVALPKTLGDTVRAGDVLCVLDSAELATA CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHCCHHCCCCEEEEECCHHHHHH YSDAGKARATLQQARLELARQKVLAADSIAAARDLQAAQQAFDSAQNDARAASDRLAQLG HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAAQATSHRRYVLRAPIAGRVVDLSAALGGFWNDTSAPLMTVADISRVWLTASVPEREIG HHHHHCCCCEEEEECCCCCCEEEHHHHHCCCCCCCCCCEEHHHHHHHEEEECCCCHHHHH QVFEGQQVTASLDAYPGQHFTGQVQHLDDLLDPTTRTLKVRVALNNHDGLLKPGMFARAQ HHHCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCHHHHHH FQARPQQALLIPDSALLQMGLYTRVFIETAPFVYRSRIVATGRAVDGSTEILSGLKAGER HHCCCCCEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHEEECCCCCCHHHHHHHHCCCCE VVIKDGALLND EEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8829543 [H]