| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is pldA [C]
Identifier: 84623871
GI number: 84623871
Start: 2451363
End: 2452496
Strand: Direct
Name: pldA [C]
Synonym: XOO_2214
Alternate gene names: 84623871
Gene position: 2451363-2452496 (Clockwise)
Preceding gene: 84623868
Following gene: 84623874
Centisome position: 49.62
GC content: 63.14
Gene sequence:
>1134_bases ATGTCCAAGCACCGCACCCGCCCTCTGACGTTGATCGCCCTGGCCGCTGCGCCATTGGCGCATGCGCAGGAAATCGCCCC GCAGCCGGCCTCGCCGCAAGCCTGCACCTCGGTCACGTCCGATGCCGTGCGTCTGGCCTGTTACGACAAGGCGCTGGGCT ACACCCCGCAGCTCACCGCGGAGGCGGATGCCGCAGCGCAATTGGCCAAGCAGAAGGAAGCCAAGCACGACGATACGCGC GCGATCAGCCGGGGCGGCGATTTCTTCCGCGCCGACGGACAGGACCAACCCAAAGAAGAAGCGGTAGCAAACGCGGGCCG CGGCTCGTTGCTGGACCGACGCTGGGAATTGGCCAAGGACTCCAAGTTAGGCACTTTCCAGGTGCGTGGCTACAAGCCGG TGTACCTGTTGCCGGCGTTCTGGACCAGCGACACCAACCGCACCCCGCAGTCGCCCAATCCGGCCGACTCGGTCGACACG CCGCAGCCACTGGACAACACCGAGCTGAAGTTCCAGCTCAGCTTCAAGACCAAGGTCGTCGAAGACCTGTTCGGCGACAA TGGCGATATCTGGATGGGCTACACCCAGAGCTCGCGCTGGCAGGCCTACAACGCCGATGCGTCGCGCCCGTTCCGCGAGA CCAATTACGAGCCCGAGGCGATGCTGGTGTTTCGCAACAACTACAGCATCTTCGGCTGGAAGGGCCGCATGAGCGGCATC AGCCTCAATCACATGTCCAATGGGCGTGCCGACCCGCTGTCGCGCTCCTGGAACCGGGTCATCCTGAACTTCGGCCTGGA TCGCGAGAACTGGGCCCTGACACTGCGCCCGTGGTTCCGCATTAAGGAAGACCGCGCCGACGACAATAATCCCGATATCG AGGATTACATGGGCCGCGGCGATGCGACGCTGGTGTACAACAAGGATGGTCAGGAATTCGCGGTGATCGCACGCCATTCG CTCCGTGGCGGCGAACGCTCGCACGGCTCGGTGCAGCTGGATTACGGCTTCCCGATCACCAGCCTGTTGCGCGGCCACAT GCAAGTGTTCGACGGTTACGGCGAAAGCATGATCGACTACAACCACGAGGCGACTTACATCGGCCTGGGCGTGTCGTTGC TGGAGTGGTTCTAA
Upstream 100 bases:
>100_bases CGAATGTTATGCCACCTTGTACACACTGCGCATGCAGACGCGACCGTTAAGCTGCGTTTCCCTGTGCCTGCCTGGCGCGC TTACCTCGGCCAGACTGCTC
Downstream 100 bases:
>100_bases GAGCAGCTAACAAAACGACTGCGCTCACCGCCAGGCGGGCGCGGCCGGTGCTCGGAATCGGCATGTACCACGCGTCCACT GTGGTTCTGAGCGCGCCATC
Product: phospholipase
Products: NA
Alternate protein names: Phosphatidylcholine 1-acylhydrolase [H]
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MSKHRTRPLTLIALAAAPLAHAQEIAPQPASPQACTSVTSDAVRLACYDKALGYTPQLTAEADAAAQLAKQKEAKHDDTR AISRGGDFFRADGQDQPKEEAVANAGRGSLLDRRWELAKDSKLGTFQVRGYKPVYLLPAFWTSDTNRTPQSPNPADSVDT PQPLDNTELKFQLSFKTKVVEDLFGDNGDIWMGYTQSSRWQAYNADASRPFRETNYEPEAMLVFRNNYSIFGWKGRMSGI SLNHMSNGRADPLSRSWNRVILNFGLDRENWALTLRPWFRIKEDRADDNNPDIEDYMGRGDATLVYNKDGQEFAVIARHS LRGGERSHGSVQLDYGFPITSLLRGHMQVFDGYGESMIDYNHEATYIGLGVSLLEWF
Sequences:
>Translated_377_residues MSKHRTRPLTLIALAAAPLAHAQEIAPQPASPQACTSVTSDAVRLACYDKALGYTPQLTAEADAAAQLAKQKEAKHDDTR AISRGGDFFRADGQDQPKEEAVANAGRGSLLDRRWELAKDSKLGTFQVRGYKPVYLLPAFWTSDTNRTPQSPNPADSVDT PQPLDNTELKFQLSFKTKVVEDLFGDNGDIWMGYTQSSRWQAYNADASRPFRETNYEPEAMLVFRNNYSIFGWKGRMSGI SLNHMSNGRADPLSRSWNRVILNFGLDRENWALTLRPWFRIKEDRADDNNPDIEDYMGRGDATLVYNKDGQEFAVIARHS LRGGERSHGSVQLDYGFPITSLLRGHMQVFDGYGESMIDYNHEATYIGLGVSLLEWF >Mature_376_residues SKHRTRPLTLIALAAAPLAHAQEIAPQPASPQACTSVTSDAVRLACYDKALGYTPQLTAEADAAAQLAKQKEAKHDDTRA ISRGGDFFRADGQDQPKEEAVANAGRGSLLDRRWELAKDSKLGTFQVRGYKPVYLLPAFWTSDTNRTPQSPNPADSVDTP QPLDNTELKFQLSFKTKVVEDLFGDNGDIWMGYTQSSRWQAYNADASRPFRETNYEPEAMLVFRNNYSIFGWKGRMSGIS LNHMSNGRADPLSRSWNRVILNFGLDRENWALTLRPWFRIKEDRADDNNPDIEDYMGRGDATLVYNKDGQEFAVIARHSL RGGERSHGSVQLDYGFPITSLLRGHMQVFDGYGESMIDYNHEATYIGLGVSLLEWF
Specific function: Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities [H]
COG id: COG2829
COG function: function code M; Outer membrane phospholipase A
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein. Note=One of the very few enzymes located there (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phospholipase A1 family [H]
Homologues:
Organism=Escherichia coli, GI2367300, Length=236, Percent_Identity=37.2881355932203, Blast_Score=154, Evalue=1e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003187 [H]
Pfam domain/function: PF02253 PLA1 [H]
EC number: =3.1.1.32; =3.1.1.4 [H]
Molecular weight: Translated: 42340; Mature: 42208
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKHRTRPLTLIALAAAPLAHAQEIAPQPASPQACTSVTSDAVRLACYDKALGYTPQLTA CCCCCCCCEEEEEEHHCCHHHHHHHCCCCCCCHHHHHHHHHHEEEEEEHHHCCCCCCCCC EADAAAQLAKQKEAKHDDTRAISRGGDFFRADGQDQPKEEAVANAGRGSLLDRRWELAKD CHHHHHHHHHHHHCCCCHHHHHHCCCCEEECCCCCCCHHHHHHCCCCCCHHHHHHHHHCC SKLGTFQVRGYKPVYLLPAFWTSDTNRTPQSPNPADSVDTPQPLDNTELKFQLSFKTKVV CCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHH EDLFGDNGDIWMGYTQSSRWQAYNADASRPFRETNYEPEAMLVFRNNYSIFGWKGRMSGI HHHHCCCCCEEEEECCCCCCEEECCCCCCCHHHCCCCCCEEEEEECCCEEEEECCCCCCE SLNHMSNGRADPLSRSWNRVILNFGLDRENWALTLRPWFRIKEDRADDNNPDIEDYMGRG EEECCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCEEEECCCCCCCCCCHHHHCCCC DATLVYNKDGQEFAVIARHSLRGGERSHGSVQLDYGFPITSLLRGHMQVFDGYGESMIDY CEEEEECCCCCEEEEEEHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHCC NHEATYIGLGVSLLEWF CCCEEEEECCHHHHHCC >Mature Secondary Structure SKHRTRPLTLIALAAAPLAHAQEIAPQPASPQACTSVTSDAVRLACYDKALGYTPQLTA CCCCCCCEEEEEEHHCCHHHHHHHCCCCCCCHHHHHHHHHHEEEEEEHHHCCCCCCCCC EADAAAQLAKQKEAKHDDTRAISRGGDFFRADGQDQPKEEAVANAGRGSLLDRRWELAKD CHHHHHHHHHHHHCCCCHHHHHHCCCCEEECCCCCCCHHHHHHCCCCCCHHHHHHHHHCC SKLGTFQVRGYKPVYLLPAFWTSDTNRTPQSPNPADSVDTPQPLDNTELKFQLSFKTKVV CCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHH EDLFGDNGDIWMGYTQSSRWQAYNADASRPFRETNYEPEAMLVFRNNYSIFGWKGRMSGI HHHHCCCCCEEEEECCCCCCEEECCCCCCCHHHCCCCCCEEEEEECCCEEEEECCCCCCE SLNHMSNGRADPLSRSWNRVILNFGLDRENWALTLRPWFRIKEDRADDNNPDIEDYMGRG EEECCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCEEEECCCCCCCCCCHHHHCCCC DATLVYNKDGQEFAVIARHSLRGGERSHGSVQLDYGFPITSLLRGHMQVFDGYGESMIDY CEEEEECCCCCEEEEEEHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHCC NHEATYIGLGVSLLEWF CCCEEEEECCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]