| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623858
Identifier: 84623858
GI number: 84623858
Start: 2442653
End: 2443009
Strand: Direct
Name: 84623858
Synonym: XOO_2201
Alternate gene names: NA
Gene position: 2442653-2443009 (Clockwise)
Preceding gene: 84623857
Following gene: 84623860
Centisome position: 49.44
GC content: 65.27
Gene sequence:
>357_bases GTGAAAAGCTTGGCTGGTCGAGCGCGCGGCGCCCTCGCCGCTCGCGGGACACGCCGTAAACCCGTCCCTGGGGGCTCGAT GGCGGCATCCATGCCGCCAACGGTCCCGCAATCGGCAAGGACACCGCACCAGACAGTTGGCGGGTGGTTTGTTGAAAAGC CAGGGACACCGCGGCGCTGGTTATCAACTGCTTTGAAACGCTGCATACCGACCAACGCAACTGGTCCTTGCCTGTTCACC GTCGCGGGCCTCTTGGCGGCATGGGTGCCGCCACGGAGCTTACAGGACGTACTTGCAGCGTGTCCCGCGATGGTGGGCGG GCAAGGGGCCTGCAGCCAAACCGCAGACCACCCATGA
Upstream 100 bases:
>100_bases CCGCTCGCGGAAATGCGTAGCAAATGACCTTATCCATGATCGGCGAAATTGACGAAGCCTGGCTGCACCGCGTGCGTTCA CTTCCTATAGCGCTCAGAGA
Downstream 100 bases:
>100_bases CGTTAGGCGGCGTGCCAGCCACCAAAGAAACCAACCAGAGTTGCTGCCCACCTATCTCGTCATGATCTGCGGCCAACACA TACTCATAAGTCAGAAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MKSLAGRARGALAARGTRRKPVPGGSMAASMPPTVPQSARTPHQTVGGWFVEKPGTPRRWLSTALKRCIPTNATGPCLFT VAGLLAAWVPPRSLQDVLAACPAMVGGQGACSQTADHP
Sequences:
>Translated_118_residues MKSLAGRARGALAARGTRRKPVPGGSMAASMPPTVPQSARTPHQTVGGWFVEKPGTPRRWLSTALKRCIPTNATGPCLFT VAGLLAAWVPPRSLQDVLAACPAMVGGQGACSQTADHP >Mature_118_residues MKSLAGRARGALAARGTRRKPVPGGSMAASMPPTVPQSARTPHQTVGGWFVEKPGTPRRWLSTALKRCIPTNATGPCLFT VAGLLAAWVPPRSLQDVLAACPAMVGGQGACSQTADHP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12197; Mature: 12197
Theoretical pI: Translated: 11.97; Mature: 11.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLAGRARGALAARGTRRKPVPGGSMAASMPPTVPQSARTPHQTVGGWFVEKPGTPRRW CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHH LSTALKRCIPTNATGPCLFTVAGLLAAWVPPRSLQDVLAACPAMVGGQGACSQTADHP HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MKSLAGRARGALAARGTRRKPVPGGSMAASMPPTVPQSARTPHQTVGGWFVEKPGTPRRW CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHH LSTALKRCIPTNATGPCLFTVAGLLAAWVPPRSLQDVLAACPAMVGGQGACSQTADHP HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA