| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is 84623856
Identifier: 84623856
GI number: 84623856
Start: 2438429
End: 2438809
Strand: Direct
Name: 84623856
Synonym: XOO_2199
Alternate gene names: NA
Gene position: 2438429-2438809 (Clockwise)
Preceding gene: 84623854
Following gene: 84623857
Centisome position: 49.36
GC content: 62.73
Gene sequence:
>381_bases ATGTCGGTGTTGCGTGGAGCTCGGGTACTCGTGGTCGAAAACGATGACATGAATGCCATGCTGCTCGACCTGCAGCTTGT TCAGGCGGGCGCTGTCGTCATGGGCCCGGTCGGCAAAGTGCACGATGCCTTGCAGCTGATCAGCGCCGACGCGCCGGATC TCGCAGTGCTGGACTATCGCCTGGGCAACGGCGAAACCAGCGAACCGGTCGCACGCCTGTTGTCCAAGCGTGGCATCCCA TTCGTACTGGCAACCGGCGTTGCCATCGGCAGCATTCCGAGCGGTTTCGAGCGTGGCGTCATTCTGACCAAGCCCTACCT GTCCGAAGATCTGGTTGGCGCGTTGTTCAGGGCGCGCGAGTCGCGCGGCGCCAAGAGCTGA
Upstream 100 bases:
>100_bases AGTGTCAGTTCGCGCCTGACGAATTCAGGTGGAGGCGGGGTCTGCAGCGTTGCGTACAGGCAGTCTCGATATACTGGCCG ACTTGGTGAAGGAGTAAGCA
Downstream 100 bases:
>100_bases GCCGCGTCACCTGCTGCGACGCTAGCCTGCCACTGTGCAGGTGCCAGGGCCGGCGACATGCCCCCCCCTGTTACCGCTCT TTCCTCCCGTCCGCGGCGTG
Product: two-component system regulatory protein
Products: NA
Alternate protein names: Two-Component System Regulatory Protein; Response Regulator Receiver; Two-Component Response Regulator; PAS-Family Sensor Histidine Kinase/Receiver Protein; Response Regulator Receiver Domain-Containing Protein; Two-Component System Response Regulator Protein; Two Component-Response Regulator Receiver; Response Regulator/Sensor Histidine Kinase; CheY-Like Response Regulator; Two-Component Response Regulator Protein; Signal Transduction Histidine Kinase; Two Component Response Regulator; Bacteriophytochrome Protein
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MSVLRGARVLVVENDDMNAMLLDLQLVQAGAVVMGPVGKVHDALQLISADAPDLAVLDYRLGNGETSEPVARLLSKRGIP FVLATGVAIGSIPSGFERGVILTKPYLSEDLVGALFRARESRGAKS
Sequences:
>Translated_126_residues MSVLRGARVLVVENDDMNAMLLDLQLVQAGAVVMGPVGKVHDALQLISADAPDLAVLDYRLGNGETSEPVARLLSKRGIP FVLATGVAIGSIPSGFERGVILTKPYLSEDLVGALFRARESRGAKS >Mature_125_residues SVLRGARVLVVENDDMNAMLLDLQLVQAGAVVMGPVGKVHDALQLISADAPDLAVLDYRLGNGETSEPVARLLSKRGIPF VLATGVAIGSIPSGFERGVILTKPYLSEDLVGALFRARESRGAKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13285; Mature: 13153
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLRGARVLVVENDDMNAMLLDLQLVQAGAVVMGPVGKVHDALQLISADAPDLAVLDYR CCCCCCCEEEEEECCCCCEEEEHHHHHHCCCEEECCCHHHHHHHHHHHCCCCCEEEEEEE LGNGETSEPVARLLSKRGIPFVLATGVAIGSIPSGFERGVILTKPYLSEDLVGALFRARE CCCCCCHHHHHHHHHHCCCCEEEECCEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHH SRGAKS HCCCCC >Mature Secondary Structure SVLRGARVLVVENDDMNAMLLDLQLVQAGAVVMGPVGKVHDALQLISADAPDLAVLDYR CCCCCCEEEEEECCCCCEEEEHHHHHHCCCEEECCCHHHHHHHHHHHCCCCCEEEEEEE LGNGETSEPVARLLSKRGIPFVLATGVAIGSIPSGFERGVILTKPYLSEDLVGALFRARE CCCCCCHHHHHHHHHHCCCCEEEECCEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHH SRGAKS HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA