| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623774
Identifier: 84623774
GI number: 84623774
Start: 2344136
End: 2344462
Strand: Direct
Name: 84623774
Synonym: XOO_2117
Alternate gene names: NA
Gene position: 2344136-2344462 (Clockwise)
Preceding gene: 84623771
Following gene: 84623775
Centisome position: 47.45
GC content: 70.64
Gene sequence:
>327_bases ATGAAACAACGACCTGCCCTCCGCGAAAGTACCGACGTCGCCGCCTCGCTCACGAGGCTGGCGGACGCGCTCGCCTGCCT GAACGCGCCCGGCGCGGTCGAGGCCTTCCTGCGCGATCTGTGTACGCCCGCCGAGCTGGAAGCCATGGCCGACCGCTGGC GGGTGGTGCCGCTGCTGGTCAAGGGCGTGCCGTACCGCGAAATCCACGAGCTGACCCAGGTCAGCGTGACCACCATCGGG CGCGTTGCGCGCACCCTGGACCACGGCGCCGGCGGCTATGCCGCGGCCCTGCGCGAACAGTCGTCGCGCCCTGACCAATC CCACTGA
Upstream 100 bases:
>100_bases GGATGATGGTCACCCAAACAAGCGCTCTCCACGCCGCCCACATAAGGTGACAAACACCGTCGATTGCGTTAATGTAATAA CACGCTATTACATTAACGCA
Downstream 100 bases:
>100_bases GAAAACAAGATGAGTGCTTCCACGGCAGCGCCGGCACGTGACCGGCTGCGTATCGCCATCCAGAAGAGCGGCCGCCTGGC CGAGCCGGCGCGCAGCCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MKQRPALRESTDVAASLTRLADALACLNAPGAVEAFLRDLCTPAELEAMADRWRVVPLLVKGVPYREIHELTQVSVTTIG RVARTLDHGAGGYAAALREQSSRPDQSH
Sequences:
>Translated_108_residues MKQRPALRESTDVAASLTRLADALACLNAPGAVEAFLRDLCTPAELEAMADRWRVVPLLVKGVPYREIHELTQVSVTTIG RVARTLDHGAGGYAAALREQSSRPDQSH >Mature_108_residues MKQRPALRESTDVAASLTRLADALACLNAPGAVEAFLRDLCTPAELEAMADRWRVVPLLVKGVPYREIHELTQVSVTTIG RVARTLDHGAGGYAAALREQSSRPDQSH
Specific function: Unknown
COG id: COG4496
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11706; Mature: 11706
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQRPALRESTDVAASLTRLADALACLNAPGAVEAFLRDLCTPAELEAMADRWRVVPLLV CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH KGVPYREIHELTQVSVTTIGRVARTLDHGAGGYAAALREQSSRPDQSH CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKQRPALRESTDVAASLTRLADALACLNAPGAVEAFLRDLCTPAELEAMADRWRVVPLLV CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH KGVPYREIHELTQVSVTTIGRVARTLDHGAGGYAAALREQSSRPDQSH CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA