| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is thrA [H]
Identifier: 84623764
GI number: 84623764
Start: 2330805
End: 2333312
Strand: Direct
Name: thrA [H]
Synonym: XOO_2107
Alternate gene names: 84623764
Gene position: 2330805-2333312 (Clockwise)
Preceding gene: 84623763
Following gene: 84623765
Centisome position: 47.18
GC content: 65.55
Gene sequence:
>2508_bases ATGTCATTGCCTGCTGTTTCGTTCGAACCCGCCGCTGTTGTTGCGTCCTCTGCGCGCACTGTCGTCCACAAATTTGGCGG CACCTCGGTGGCCGATGCCGACCGCTATCGGCATGTGGCGCAGCTGCTGCTTGCGCGCGACGAGACGGTGCAAGTCACCG TGGTCTCGGCAATGAAGGGCGTCACCGATGCCTTGATCGAGCTGGCCGAACTGGCCGCAAAGGATCGTCCCGAGTGGCGC GATCGCTGGCACGAAACGCGTGCGCGCCATCGCGGTGCCGCGGTGGCCCTGCTGGGTGAGCATTCCGGGCCGACCGTTGA GTGGCTGGACGAACGCTTCGAACACCTGTCGCAGATCCTCGGCGCATTGGCGGTGATCGGCGAATTGCCGCGCGAGGTGC TCGACCGCGTGCAGGGCCTGGGCGAGGTGTATTCGGCGCAGTTGCTGGGCGATCACTTTCGCGCGATCGGCGAAGACTGC GCGGTGCTGGACGCACGCGATGTGCTGGTGGTCAATCGCGGCGAACTCGGTGTGGATGTGGACTGGGAAGTGAGCGCGCA GCAGCTTGCCACGTGGCGGCAGGCGCATCCGCAAACGCGCGTGGTGGTGACCGGATTCGTGGCGCGCGATCGCGCCGATC GCATCACCACACTGGGACGCAACGGCAGCGATTACTCCGGTGCGATTTTCGCTGCATTGTTCGATGCCGACGAACTGCAT ATCTGGACCGATGTGGACGGCGTGCTGTCGGCCGATCCGCGCGTGGTGCCCGAAGCGGTGCAACTGGAAACGCTGAGCTA CGACGAGGCCTGTGAGCTGGCGTATTTCGGTGCGAAGGTAGTGCATCCGCAAACGATGTCGCCGGCGATCGAACGCGGCC TGCCGATCATCATCCGTAACACCTTCCAGCCCGAGCATCCCGGCACGCGCATCACTGCCAGCAGTGCGGTCAGGGGGCCG ATCAAGGGGCTGACGTTGAGCCCGGATCTGGCGGTGCTGAATCTGGAAGGCACCGGTCTGATCGGTGTGCCGGGCACGGC CGAGCGCGTCTTCGCATCGCTGCGCACCGCGCAGGTGTCGGTGGTGATGATCTCGCAGGGTTCGTCGGAACATTCGATCT GTTGCGTGGTCAAGCAGCACGAATCCGAGCGTGCACGCAATGCGTTGTTGCAGGCGTTCGCGCATGAACTCACGGTCGGC CAGGTGCAGCGCGTGCAGCTTACTACCGGCATCAGCGTGCTGGCGGCGGTGGGCGATGGCATGGCCGGACAGCCGGGTGT GGCGGCACGGCTGTTCGAATCGTTGGGGCGCGCGCACGTCAATATCCTGGCGATTGCGCAGGGCTCGTCCGAACGCAACA TTTCGGTGGCCATCGATGCGGCGCATGCCACCAAGGCCTTGCGCGCGGCGCATGCCGGTTTCTGGTTGTCGCCGCAGACC TTCTCTGTCGGCGTAATCGGGCCGGGCAATGTGGGCGCGGCGTTGCTGGATCAACTACGCGTCGCGCAACCGCAGTTGCT GGGCAAGGCCAATCTGGATCTGCGCCTGCGTGCGGTGGTGTCACGCGGACGCATGCTGCTGGACGAGCGCGGCCTGGTCG GCGACTGGCGCGATGCGTTTGCATCGGCCGCCACGCCCACCGATCTGGAACGCTTCACCACGCATTTGCTGTCCGCACAT CTGCCGCACACGGTGATCATTGATTGCAGCGGCAGCGCCGAAGTCGCGGACCGTTATGCAGGCTGGTTGGCTGCCGGCAT CCATGTGGTGACGCCGAATAAACAGGCGGGTTCCGGCCCGCTCGCGCGTTATGAGGCAATCCGCGCAGCGGCCGATGCCA GCGGTGCGCGCTTCCGTTACGAAGCCACCGTGGGCGCCGGCTTGCCGGTGATCACCACGCTGCGCGATCTGGTCGATACC GGCGATACAGTCACCTCCATTGAAGGCATTTTCTCCGGCACGTTGGCCTGGTTGTTCAACAAATACGACGGCAGCGTGCC GTTCGCCGAACTGGTGACGCAGGCGCGCAGCATGGGCTATACCGAACCGGACCCGCGCGACGATCTGTCCGGCGTGGATG TGGCACGCAAGCTGGTGATCCTGGCGCGCGAAGCAGGGCGCGCCATCAGCCTGGAAGACGTCCAGGTGGAAAGCCTGGTG CCAGCGGCATTGCGCCAGTCCAGCGTGGAGGATTTCATGGCGCGTCTGCCGGAAGTGGATGCTGCCTTTGCGCAGCGTCT GGCCAACGCGCGCGTGCGCGGCAACGTGCTGCGCTACGTGGCGCAGTTGCCGCCGGACCGCGCGCCCAGCGTGGGCCTGG TCGAGCTGCCGGCCGATCATGCATTCGCCAACTTGCGTCTGACCGACAACGTCGTTCAATTCACCACGCGCCGCTATTGC CAGAACCCGCTGGTGGTGCAGGGTCCGGGTGCGGGGCCGGAAGTGACCGCAGCAGGCGTGTTCGCCGATCTGCTGCGCGT GGCGGCAGGCGAGGGTGCGCGGCTATGA
Upstream 100 bases:
>100_bases CGCGTAACTTCCGAAAACAACGGCCCCGCACCCGGATCAGGATGCGGAGGCTTCCCTCTCTCATCCGATGCGGACGGGGC CTCCCCAACGAGGTCTTTCG
Downstream 100 bases:
>100_bases GCGGTACAGGTCTGTCGTCGCCGCGCGCAGGTGCGGGGCATTCCGCGCCGCGCGAGGCACGCGCGTTCGCTCCGGCCTCG GTGGCCAACGTGGCGGTCGG
Product: bifunctional aspartokinase I/homeserine dehydrogenase I
Products: NA
Alternate protein names: Aspartokinase I/homoserine dehydrogenase I; AKI-HDI; Aspartokinase; Homoserine dehydrogenase [H]
Number of amino acids: Translated: 835; Mature: 834
Protein sequence:
>835_residues MSLPAVSFEPAAVVASSARTVVHKFGGTSVADADRYRHVAQLLLARDETVQVTVVSAMKGVTDALIELAELAAKDRPEWR DRWHETRARHRGAAVALLGEHSGPTVEWLDERFEHLSQILGALAVIGELPREVLDRVQGLGEVYSAQLLGDHFRAIGEDC AVLDARDVLVVNRGELGVDVDWEVSAQQLATWRQAHPQTRVVVTGFVARDRADRITTLGRNGSDYSGAIFAALFDADELH IWTDVDGVLSADPRVVPEAVQLETLSYDEACELAYFGAKVVHPQTMSPAIERGLPIIIRNTFQPEHPGTRITASSAVRGP IKGLTLSPDLAVLNLEGTGLIGVPGTAERVFASLRTAQVSVVMISQGSSEHSICCVVKQHESERARNALLQAFAHELTVG QVQRVQLTTGISVLAAVGDGMAGQPGVAARLFESLGRAHVNILAIAQGSSERNISVAIDAAHATKALRAAHAGFWLSPQT FSVGVIGPGNVGAALLDQLRVAQPQLLGKANLDLRLRAVVSRGRMLLDERGLVGDWRDAFASAATPTDLERFTTHLLSAH LPHTVIIDCSGSAEVADRYAGWLAAGIHVVTPNKQAGSGPLARYEAIRAAADASGARFRYEATVGAGLPVITTLRDLVDT GDTVTSIEGIFSGTLAWLFNKYDGSVPFAELVTQARSMGYTEPDPRDDLSGVDVARKLVILAREAGRAISLEDVQVESLV PAALRQSSVEDFMARLPEVDAAFAQRLANARVRGNVLRYVAQLPPDRAPSVGLVELPADHAFANLRLTDNVVQFTTRRYC QNPLVVQGPGAGPEVTAAGVFADLLRVAAGEGARL
Sequences:
>Translated_835_residues MSLPAVSFEPAAVVASSARTVVHKFGGTSVADADRYRHVAQLLLARDETVQVTVVSAMKGVTDALIELAELAAKDRPEWR DRWHETRARHRGAAVALLGEHSGPTVEWLDERFEHLSQILGALAVIGELPREVLDRVQGLGEVYSAQLLGDHFRAIGEDC AVLDARDVLVVNRGELGVDVDWEVSAQQLATWRQAHPQTRVVVTGFVARDRADRITTLGRNGSDYSGAIFAALFDADELH IWTDVDGVLSADPRVVPEAVQLETLSYDEACELAYFGAKVVHPQTMSPAIERGLPIIIRNTFQPEHPGTRITASSAVRGP IKGLTLSPDLAVLNLEGTGLIGVPGTAERVFASLRTAQVSVVMISQGSSEHSICCVVKQHESERARNALLQAFAHELTVG QVQRVQLTTGISVLAAVGDGMAGQPGVAARLFESLGRAHVNILAIAQGSSERNISVAIDAAHATKALRAAHAGFWLSPQT FSVGVIGPGNVGAALLDQLRVAQPQLLGKANLDLRLRAVVSRGRMLLDERGLVGDWRDAFASAATPTDLERFTTHLLSAH LPHTVIIDCSGSAEVADRYAGWLAAGIHVVTPNKQAGSGPLARYEAIRAAADASGARFRYEATVGAGLPVITTLRDLVDT GDTVTSIEGIFSGTLAWLFNKYDGSVPFAELVTQARSMGYTEPDPRDDLSGVDVARKLVILAREAGRAISLEDVQVESLV PAALRQSSVEDFMARLPEVDAAFAQRLANARVRGNVLRYVAQLPPDRAPSVGLVELPADHAFANLRLTDNVVQFTTRRYC QNPLVVQGPGAGPEVTAAGVFADLLRVAAGEGARL >Mature_834_residues SLPAVSFEPAAVVASSARTVVHKFGGTSVADADRYRHVAQLLLARDETVQVTVVSAMKGVTDALIELAELAAKDRPEWRD RWHETRARHRGAAVALLGEHSGPTVEWLDERFEHLSQILGALAVIGELPREVLDRVQGLGEVYSAQLLGDHFRAIGEDCA VLDARDVLVVNRGELGVDVDWEVSAQQLATWRQAHPQTRVVVTGFVARDRADRITTLGRNGSDYSGAIFAALFDADELHI WTDVDGVLSADPRVVPEAVQLETLSYDEACELAYFGAKVVHPQTMSPAIERGLPIIIRNTFQPEHPGTRITASSAVRGPI KGLTLSPDLAVLNLEGTGLIGVPGTAERVFASLRTAQVSVVMISQGSSEHSICCVVKQHESERARNALLQAFAHELTVGQ VQRVQLTTGISVLAAVGDGMAGQPGVAARLFESLGRAHVNILAIAQGSSERNISVAIDAAHATKALRAAHAGFWLSPQTF SVGVIGPGNVGAALLDQLRVAQPQLLGKANLDLRLRAVVSRGRMLLDERGLVGDWRDAFASAATPTDLERFTTHLLSAHL PHTVIIDCSGSAEVADRYAGWLAAGIHVVTPNKQAGSGPLARYEAIRAAADASGARFRYEATVGAGLPVITTLRDLVDTG DTVTSIEGIFSGTLAWLFNKYDGSVPFAELVTQARSMGYTEPDPRDDLSGVDVARKLVILAREAGRAISLEDVQVESLVP AALRQSSVEDFMARLPEVDAAFAQRLANARVRGNVLRYVAQLPPDRAPSVGLVELPADHAFANLRLTDNVVQFTTRRYCQ NPLVVQGPGAGPEVTAAGVFADLLRVAAGEGARL
Specific function: Catalyzes 2 nonconsecutive reactions in the common biosynthetic pathway leading from Asp to diaminopimelate and Lys, to Met, and to Thr and Ile. [C]
COG id: COG0527
COG function: function code E; Aspartokinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ACT domains [H]
Homologues:
Organism=Escherichia coli, GI1786183, Length=812, Percent_Identity=40.64039408867, Blast_Score=557, Evalue=1e-160, Organism=Escherichia coli, GI1790376, Length=818, Percent_Identity=34.841075794621, Blast_Score=393, Evalue=1e-110, Organism=Escherichia coli, GI1790455, Length=463, Percent_Identity=29.3736501079914, Blast_Score=154, Evalue=3e-38, Organism=Saccharomyces cerevisiae, GI6322599, Length=363, Percent_Identity=39.6694214876033, Blast_Score=219, Evalue=1e-57, Organism=Saccharomyces cerevisiae, GI6320893, Length=507, Percent_Identity=26.232741617357, Blast_Score=150, Evalue=6e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR001048 - InterPro: IPR005106 - InterPro: IPR001341 - InterPro: IPR018042 - InterPro: IPR011147 - InterPro: IPR001342 - InterPro: IPR019811 - InterPro: IPR016040 [H]
Pfam domain/function: PF00696 AA_kinase; PF01842 ACT; PF00742 Homoserine_dh; PF03447 NAD_binding_3 [H]
EC number: =2.7.2.4; =1.1.1.3 [H]
Molecular weight: Translated: 89235; Mature: 89104
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: PS01042 HOMOSER_DHGENASE ; PS00324 ASPARTOKINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPAVSFEPAAVVASSARTVVHKFGGTSVADADRYRHVAQLLLARDETVQVTVVSAMKG CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHH VTDALIELAELAAKDRPEWRDRWHETRARHRGAAVALLGEHSGPTVEWLDERFEHLSQIL HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHH GALAVIGELPREVLDRVQGLGEVYSAQLLGDHFRAIGEDCAVLDARDVLVVNRGELGVDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCC DWEVSAQQLATWRQAHPQTRVVVTGFVARDRADRITTLGRNGSDYSGAIFAALFDADELH CCCCCHHHHHHHHHCCCCCEEEEEEEHHHCCHHHHHCCCCCCCCCCCEEEEEEECCCCEE IWTDVDGVLSADPRVVPEAVQLETLSYDEACELAYFGAKVVHPQTMSPAIERGLPIIIRN EEECCCCHHCCCCCCCCHHHEEEECCCCHHHHHHHHCCEEECCCCCCHHHHCCCEEEEEC TFQPEHPGTRITASSAVRGPIKGLTLSPDLAVLNLEGTGLIGVPGTAERVFASLRTAQVS CCCCCCCCCEEEECCCCCCCCCCCEECCCEEEEEECCCEEEECCCCHHHHHHHHHHHEEE VVMISQGSSEHSICCVVKQHESERARNALLQAFAHELTVGQVQRVQLTTGISVLAAVGDG EEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHCCC MAGQPGVAARLFESLGRAHVNILAIAQGSSERNISVAIDAAHATKALRAAHAGFWLSPQT CCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEEECHHHHHHHHHHHCCCEECCCC FSVGVIGPGNVGAALLDQLRVAQPQLLGKANLDLRLRAVVSRGRMLLDERGLVGDWRDAF EEEEEECCCCHHHHHHHHHHHCCHHHCCCCCCCEEHHHHHHCCHHEECCCCCCCCHHHHH ASAATPTDLERFTTHLLSAHLPHTVIIDCSGSAEVADRYAGWLAAGIHVVTPNKQAGSGP HCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCEEEECCCCCCCCCC LARYEAIRAAADASGARFRYEATVGAGLPVITTLRDLVDTGDTVTSIEGIFSGTLAWLFN HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH KYDGSVPFAELVTQARSMGYTEPDPRDDLSGVDVARKLVILAREAGRAISLEDVQVESLV HCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHH PAALRQSSVEDFMARLPEVDAAFAQRLANARVRGNVLRYVAQLPPDRAPSVGLVELPADH HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCC AFANLRLTDNVVQFTTRRYCQNPLVVQGPGAGPEVTAAGVFADLLRVAAGEGARL CEEEEEECHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SLPAVSFEPAAVVASSARTVVHKFGGTSVADADRYRHVAQLLLARDETVQVTVVSAMKG CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHH VTDALIELAELAAKDRPEWRDRWHETRARHRGAAVALLGEHSGPTVEWLDERFEHLSQIL HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHH GALAVIGELPREVLDRVQGLGEVYSAQLLGDHFRAIGEDCAVLDARDVLVVNRGELGVDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCC DWEVSAQQLATWRQAHPQTRVVVTGFVARDRADRITTLGRNGSDYSGAIFAALFDADELH CCCCCHHHHHHHHHCCCCCEEEEEEEHHHCCHHHHHCCCCCCCCCCCEEEEEEECCCCEE IWTDVDGVLSADPRVVPEAVQLETLSYDEACELAYFGAKVVHPQTMSPAIERGLPIIIRN EEECCCCHHCCCCCCCCHHHEEEECCCCHHHHHHHHCCEEECCCCCCHHHHCCCEEEEEC TFQPEHPGTRITASSAVRGPIKGLTLSPDLAVLNLEGTGLIGVPGTAERVFASLRTAQVS CCCCCCCCCEEEECCCCCCCCCCCEECCCEEEEEECCCEEEECCCCHHHHHHHHHHHEEE VVMISQGSSEHSICCVVKQHESERARNALLQAFAHELTVGQVQRVQLTTGISVLAAVGDG EEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHCCC MAGQPGVAARLFESLGRAHVNILAIAQGSSERNISVAIDAAHATKALRAAHAGFWLSPQT CCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEEECHHHHHHHHHHHCCCEECCCC FSVGVIGPGNVGAALLDQLRVAQPQLLGKANLDLRLRAVVSRGRMLLDERGLVGDWRDAF EEEEEECCCCHHHHHHHHHHHCCHHHCCCCCCCEEHHHHHHCCHHEECCCCCCCCHHHHH ASAATPTDLERFTTHLLSAHLPHTVIIDCSGSAEVADRYAGWLAAGIHVVTPNKQAGSGP HCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCEEEECCCCCCCCCC LARYEAIRAAADASGARFRYEATVGAGLPVITTLRDLVDTGDTVTSIEGIFSGTLAWLFN HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH KYDGSVPFAELVTQARSMGYTEPDPRDDLSGVDVARKLVILAREAGRAISLEDVQVESLV HCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHH PAALRQSSVEDFMARLPEVDAAFAQRLANARVRGNVLRYVAQLPPDRAPSVGLVELPADH HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCC AFANLRLTDNVVQFTTRRYCQNPLVVQGPGAGPEVTAAGVFADLLRVAAGEGARL CEEEEEECHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8423151 [H]