| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is pssA [H]
Identifier: 84623741
GI number: 84623741
Start: 2306982
End: 2307596
Strand: Direct
Name: pssA [H]
Synonym: XOO_2084
Alternate gene names: 84623741
Gene position: 2306982-2307596 (Clockwise)
Preceding gene: 84623739
Following gene: 84623742
Centisome position: 46.7
GC content: 64.55
Gene sequence:
>615_bases ATGAAACGCCATTTTTCGATGCTGCGCGATTTCCAACTCGCGGACTGGTTCACACTTGCCAACGCTTTCTGCGGCACCGG CGCGGTGTTTGCGGCGATGCGCTTCCTGCAAGAGGAGCATCGTGGCGATCTGTTGCTGGGGATGGCGCTGATTCCGCTGG CATTCGTGTTCGATGCGCTGGACGGGCACGTGGCGCGCTGGCGCAAGGCGTCTTCCACCCTGGGCCGCGAGCTGGATTCG CTGGCGGATGTGATTTCGTTTGGCGTGGCGCCAGCGGCGCTGGGGTATGCCTGCGGCATGCGTGGCGGCTGGGACTGGCT GGTGCTGAGCTATTTCGTCTGCTGCGGCGTGAGCCGGCTGGCGCGCTACAACGTCACCGCCGAGGAGATCGCCGGGGAGG CCGACAAGGTGCCGTATTTCGAAGGCACGCCCATTCCCACCAGCCTGCTGCTGGTGATCCTGCTCGCGGTTGCCGCCAGC ATCGGGCATATCGGCGAGACCTTGTGGTGGGGCCAGTGGCAGCTCGGTCCGTGGCAGTTCCACCCGCTGGTGCTGCTGTT TGCGGTGTCCGGCTCGCTGATGATCAGCAAGACGCTGCGCATCCCCAAACTCTGA
Upstream 100 bases:
>100_bases GAAGCGGTCACGCGAATCGCCAGCCTAGCCGAGTGTGGCGAAACGGTCGCCTGCATGGCGCGCGCGCTACCCTTGGTGTC TTGCCCACCTCAGGCTCCGC
Downstream 100 bases:
>100_bases GCGGCACGCTGGGATGCACGCGGTAGGATGGCTCGGTGAACGGTCACGGGACGGAATGATGGCAAGCAGCGGTTCGGACA ACGGCAATTTCGACGACAAG
Product: CDP-diacylglycerol-serine o-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylserine synthase [H]
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MKRHFSMLRDFQLADWFTLANAFCGTGAVFAAMRFLQEEHRGDLLLGMALIPLAFVFDALDGHVARWRKASSTLGRELDS LADVISFGVAPAALGYACGMRGGWDWLVLSYFVCCGVSRLARYNVTAEEIAGEADKVPYFEGTPIPTSLLLVILLAVAAS IGHIGETLWWGQWQLGPWQFHPLVLLFAVSGSLMISKTLRIPKL
Sequences:
>Translated_204_residues MKRHFSMLRDFQLADWFTLANAFCGTGAVFAAMRFLQEEHRGDLLLGMALIPLAFVFDALDGHVARWRKASSTLGRELDS LADVISFGVAPAALGYACGMRGGWDWLVLSYFVCCGVSRLARYNVTAEEIAGEADKVPYFEGTPIPTSLLLVILLAVAAS IGHIGETLWWGQWQLGPWQFHPLVLLFAVSGSLMISKTLRIPKL >Mature_204_residues MKRHFSMLRDFQLADWFTLANAFCGTGAVFAAMRFLQEEHRGDLLLGMALIPLAFVFDALDGHVARWRKASSTLGRELDS LADVISFGVAPAALGYACGMRGGWDWLVLSYFVCCGVSRLARYNVTAEEIAGEADKVPYFEGTPIPTSLLLVILLAVAAS IGHIGETLWWGQWQLGPWQFHPLVLLFAVSGSLMISKTLRIPKL
Specific function: Unknown
COG id: COG1183
COG function: function code I; Phosphatidylserine synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320864, Length=205, Percent_Identity=42.4390243902439, Blast_Score=170, Evalue=2e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004533 - InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.8 [H]
Molecular weight: Translated: 22478; Mature: 22478
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRHFSMLRDFQLADWFTLANAFCGTGAVFAAMRFLQEEHRGDLLLGMALIPLAFVFDAL CCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH DGHVARWRKASSTLGRELDSLADVISFGVAPAALGYACGMRGGWDWLVLSYFVCCGVSRL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH ARYNVTAEEIAGEADKVPYFEGTPIPTSLLLVILLAVAASIGHIGETLWWGQWQLGPWQF HHCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH HPLVLLFAVSGSLMISKTLRIPKL HHHHHHHHHCCCHHHHHCCCCCCC >Mature Secondary Structure MKRHFSMLRDFQLADWFTLANAFCGTGAVFAAMRFLQEEHRGDLLLGMALIPLAFVFDAL CCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH DGHVARWRKASSTLGRELDSLADVISFGVAPAALGYACGMRGGWDWLVLSYFVCCGVSRL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH ARYNVTAEEIAGEADKVPYFEGTPIPTSLLLVILLAVAASIGHIGETLWWGQWQLGPWQF HHCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH HPLVLLFAVSGSLMISKTLRIPKL HHHHHHHHHCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]