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The map label for this gene is yeiE [H]

Identifier: 84623727

GI number: 84623727

Start: 2291741

End: 2292664

Strand: Direct

Name: yeiE [H]

Synonym: XOO_2070

Alternate gene names: 84623727

Gene position: 2291741-2292664 (Clockwise)

Preceding gene: 84623725

Following gene: 84623732

Centisome position: 46.39

GC content: 65.91

Gene sequence:

>924_bases
ATGCGTCTGACACGGCGGCAGCTGCTGATCTTCACGGCCGTGGCCGATACCGGCAGCACCACGGCGGCGGGGGAGCGCGT
GGCGCTGTCGCAATCGGCGACCAGCGGCGCCCTCAACGAACTGGAAAGCCTGCTCGGCGCACAGCTGTTCGACCGCATCG
GCAAGCGTTTGCTGCTTAACGACAACGGCCGCGCATTGCTGCCGCAGGCCAGGGCCTTGCTTGACGGCGTGCAGGAAATT
GAACGCCAGTTCGGGCTCGGAGCCGCCGGTGTGGCCACAGCGCCTGTGCCCACGCGGCTTCGCGTGGGTGCCAGCACCAC
CATCGGCAACTACGTGTTGCCGTCACTTATCGCCGGCTATCGAACAGCATGGCCTGGCGCCGCGGTGGACGTGGTCATCG
GCAATACGCGTGAGGTGGCTGCCGCCGTGAGCCGGTTGGAGGTGGACATCGGTTTGATCGAAGGCCCGTGCCATGAGGCG
GATCTTGAGGTCGTGCCGTGGCGACAGGACGCGTTGGTGATCGTGGCGGCACCGACGCATGCATTGGCGCAGGCCGCCAA
GCAGGCACTCGTTCCGTTGAAAGCCTTGCGACAGGCACGCTGGCTGCTTCGCGAGCCGGGCTCGGGCACGCGTGAGGCGG
TGGAGCACGTCTTGTTGCCGCACTTGCATCACCTCGATAGCGAGATGCAGCCCGGGAGCACCGAAGCGATCAAGCAGGCG
GCAGCGGAAGGCCTGGGACTGGCATGCCTGTCGCGATGTGCGGTGCAGGACCTGGTGACACTGGGCCGGCTGGTGATTGT
GCACACCACCTTGCCGCGGCTGAGGCGGCGCTTCTACAGGATCCAGCACCGACAAAAACGTCTGTCGGGCAACCTGCAGC
GCTTCGCCGCGCATTGCGATCGGCTTGAAGTGGAGCCTTTCTGA

Upstream 100 bases:

>100_bases
CTTGCGGAAGGCATGCGTGCACTATGGACCGCAGTGCGTCTATCCGGCAAACGGATTATTCCGCTTTAACCAATCCACAA
AACAGGTCACGAGTCTTCAC

Downstream 100 bases:

>100_bases
TGGCTGACGTGCTGAGCATGCGCCGGACGACATGACCTATTTTCACGCTCATGTCCGCGTGTGGCTTGCACGCAAGCAAT
GCACTGCCGACGCTGCGGCG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MRLTRRQLLIFTAVADTGSTTAAGERVALSQSATSGALNELESLLGAQLFDRIGKRLLLNDNGRALLPQARALLDGVQEI
ERQFGLGAAGVATAPVPTRLRVGASTTIGNYVLPSLIAGYRTAWPGAAVDVVIGNTREVAAAVSRLEVDIGLIEGPCHEA
DLEVVPWRQDALVIVAAPTHALAQAAKQALVPLKALRQARWLLREPGSGTREAVEHVLLPHLHHLDSEMQPGSTEAIKQA
AAEGLGLACLSRCAVQDLVTLGRLVIVHTTLPRLRRRFYRIQHRQKRLSGNLQRFAAHCDRLEVEPF

Sequences:

>Translated_307_residues
MRLTRRQLLIFTAVADTGSTTAAGERVALSQSATSGALNELESLLGAQLFDRIGKRLLLNDNGRALLPQARALLDGVQEI
ERQFGLGAAGVATAPVPTRLRVGASTTIGNYVLPSLIAGYRTAWPGAAVDVVIGNTREVAAAVSRLEVDIGLIEGPCHEA
DLEVVPWRQDALVIVAAPTHALAQAAKQALVPLKALRQARWLLREPGSGTREAVEHVLLPHLHHLDSEMQPGSTEAIKQA
AAEGLGLACLSRCAVQDLVTLGRLVIVHTTLPRLRRRFYRIQHRQKRLSGNLQRFAAHCDRLEVEPF
>Mature_307_residues
MRLTRRQLLIFTAVADTGSTTAAGERVALSQSATSGALNELESLLGAQLFDRIGKRLLLNDNGRALLPQARALLDGVQEI
ERQFGLGAAGVATAPVPTRLRVGASTTIGNYVLPSLIAGYRTAWPGAAVDVVIGNTREVAAAVSRLEVDIGLIEGPCHEA
DLEVVPWRQDALVIVAAPTHALAQAAKQALVPLKALRQARWLLREPGSGTREAVEHVLLPHLHHLDSEMQPGSTEAIKQA
AAEGLGLACLSRCAVQDLVTLGRLVIVHTTLPRLRRRFYRIQHRQKRLSGNLQRFAAHCDRLEVEPF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=300, Percent_Identity=47.6666666666667, Blast_Score=266, Evalue=1e-72,
Organism=Escherichia coli, GI157672245, Length=214, Percent_Identity=29.4392523364486, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1788748, Length=289, Percent_Identity=25.9515570934256, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI87082132, Length=263, Percent_Identity=24.3346007604563, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1788296, Length=235, Percent_Identity=25.9574468085106, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1787530, Length=296, Percent_Identity=26.6891891891892, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI87081904, Length=189, Percent_Identity=31.2169312169312, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI145693105, Length=291, Percent_Identity=23.0240549828179, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33176; Mature: 33176

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTRRQLLIFTAVADTGSTTAAGERVALSQSATSGALNELESLLGAQLFDRIGKRLLLN
CCCCHHHEEEEEEECCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEC
DNGRALLPQARALLDGVQEIERQFGLGAAGVATAPVPTRLRVGASTTIGNYVLPSLIAGY
CCCCEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHH
RTAWPGAAVDVVIGNTREVAAAVSRLEVDIGLIEGPCHEADLEVVPWRQDALVIVAAPTH
HCCCCCCEEEEEECCHHHHHHHHHHHHHHEEEECCCCCCCCCCEECCCCCCEEEEECCHH
ALAQAAKQALVPLKALRQARWLLREPGSGTREAVEHVLLPHLHHLDSEMQPGSTEAIKQA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
AAEGLGLACLSRCAVQDLVTLGRLVIVHTTLPRLRRRFYRIQHRQKRLSGNLQRFAAHCD
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHC
RLEVEPF
CCCCCCC
>Mature Secondary Structure
MRLTRRQLLIFTAVADTGSTTAAGERVALSQSATSGALNELESLLGAQLFDRIGKRLLLN
CCCCHHHEEEEEEECCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEC
DNGRALLPQARALLDGVQEIERQFGLGAAGVATAPVPTRLRVGASTTIGNYVLPSLIAGY
CCCCEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHH
RTAWPGAAVDVVIGNTREVAAAVSRLEVDIGLIEGPCHEADLEVVPWRQDALVIVAAPTH
HCCCCCCEEEEEECCHHHHHHHHHHHHHHEEEECCCCCCCCCCEECCCCCCEEEEECCHH
ALAQAAKQALVPLKALRQARWLLREPGSGTREAVEHVLLPHLHHLDSEMQPGSTEAIKQA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
AAEGLGLACLSRCAVQDLVTLGRLVIVHTTLPRLRRRFYRIQHRQKRLSGNLQRFAAHCD
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHC
RLEVEPF
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]