| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is gtaB [H]
Identifier: 84623713
GI number: 84623713
Start: 2274982
End: 2275875
Strand: Direct
Name: gtaB [H]
Synonym: XOO_2056
Alternate gene names: 84623713
Gene position: 2274982-2275875 (Clockwise)
Preceding gene: 84623712
Following gene: 84623714
Centisome position: 46.05
GC content: 60.4
Gene sequence:
>894_bases ATGAGCCAGCGTATTCGCAAGGCAGTATTTCCCGTCGCAGGTCTTGGAACCCGCTTTCTTCCGGCAACCAAGACGGTGCC GAAAGAAATGCTGCCAATCATCGACAAGCCCTTGATTCAGTACGCCGTCGACGAAGCCATCCAGGCTGGTTGCGATACGT TGATCTTTGTGACCAACCGCTACAAACACTCCATTGCCGATTACTTCGACAAGGCCTACGAGCTGGAGCAAAAGCTTGAG CGTGCAGGCAAGTTGGAGCAGCTGGAGCTAGTACGCCATGCGTTGCCGGAAGGCGTTCGCGCCATTTTTGTGACGCAGGC AGAAGCGCTCGGCCTAGGCCACGCGGTGTTGTGTGCCAAGGCCGTGGTCGGTGACGAACCGTTCGCGGTGCTGCTGCCGG ACGATCTGATGTGGAACCGCGGCGATGCCGCGCTGACCCAGATGGCCGATGTTGCAGAGGCCTCCGGCGGCAGCGTCATT GCGGTGGAAGATGTGCCGCAGGAAAAGACGGCCAGCTACGGCATCGTCTCTACCGATGCATTCGATGGCCGCAAGGGCCG CATCACTGCGATCGTCGAGAAGCCCAAGCCGGAAGTGGCGCCGAGTAATCTGGCCGTAGTCGGTCGGTATGTGCTGAGCC CGAAGATCTTCGAATTTCTCGAGGCTACCGGTGCAGGCGCGGGCGGCGAGATCCAGCTGACCGACGCGATTGCCGAGCTG CTGAAGAAAGAGCAGGTCGATGCCTTCCGTTTCCAAGGTCGCCGTTTCGATTGCGGTGCGCATATCGGCCTGATCGAAGC CACCGTGCATTTCGCGCTCGAGCACGAAAAGCATGGCGGCCCAGCGAAGGAAATCCTGCGCAACGCATTGGCCCAGGCCG ACGCGCGCGGCTGA
Upstream 100 bases:
>100_bases TGGGCAGTCTGATGCCGGATTTCGCGGCTGCTCGACGGAAAGTCGACGCGCGATCTGATACGGTCGTTCCATTCCCCGCA CGTGAGGTCAGAAGACTGTA
Downstream 100 bases:
>100_bases TTGCTGCCTGATCGCTGTTTCCACGAACGACGCCAGCTGGCGTCGTTCGTCGTTCAGGACTCGCCACACGATGCCGCTGC GCTGGCAGAGCTCGGTATGG
Product: UTP-glucose-1-phosphate uridylyltransferase
Products: NA
Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MSQRIRKAVFPVAGLGTRFLPATKTVPKEMLPIIDKPLIQYAVDEAIQAGCDTLIFVTNRYKHSIADYFDKAYELEQKLE RAGKLEQLELVRHALPEGVRAIFVTQAEALGLGHAVLCAKAVVGDEPFAVLLPDDLMWNRGDAALTQMADVAEASGGSVI AVEDVPQEKTASYGIVSTDAFDGRKGRITAIVEKPKPEVAPSNLAVVGRYVLSPKIFEFLEATGAGAGGEIQLTDAIAEL LKKEQVDAFRFQGRRFDCGAHIGLIEATVHFALEHEKHGGPAKEILRNALAQADARG
Sequences:
>Translated_297_residues MSQRIRKAVFPVAGLGTRFLPATKTVPKEMLPIIDKPLIQYAVDEAIQAGCDTLIFVTNRYKHSIADYFDKAYELEQKLE RAGKLEQLELVRHALPEGVRAIFVTQAEALGLGHAVLCAKAVVGDEPFAVLLPDDLMWNRGDAALTQMADVAEASGGSVI AVEDVPQEKTASYGIVSTDAFDGRKGRITAIVEKPKPEVAPSNLAVVGRYVLSPKIFEFLEATGAGAGGEIQLTDAIAEL LKKEQVDAFRFQGRRFDCGAHIGLIEATVHFALEHEKHGGPAKEILRNALAQADARG >Mature_296_residues SQRIRKAVFPVAGLGTRFLPATKTVPKEMLPIIDKPLIQYAVDEAIQAGCDTLIFVTNRYKHSIADYFDKAYELEQKLER AGKLEQLELVRHALPEGVRAIFVTQAEALGLGHAVLCAKAVVGDEPFAVLLPDDLMWNRGDAALTQMADVAEASGGSVIA VEDVPQEKTASYGIVSTDAFDGRKGRITAIVEKPKPEVAPSNLAVVGRYVLSPKIFEFLEATGAGAGGEIQLTDAIAELL KKEQVDAFRFQGRRFDCGAHIGLIEATVHFALEHEKHGGPAKEILRNALAQADARG
Specific function: Catalyzes the formation of UDP-glucose from glucose-1- phosphate and UTP. This is an intermediate step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG), i.e. a glycolipid found in the membrane, which is also used as a membrane anchor for lipote
COG id: COG1210
COG function: function code M; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1787488, Length=297, Percent_Identity=45.4545454545455, Blast_Score=247, Evalue=8e-67, Organism=Escherichia coli, GI1788355, Length=297, Percent_Identity=42.4242424242424, Blast_Score=223, Evalue=2e-59, Organism=Escherichia coli, GI1788351, Length=284, Percent_Identity=26.4084507042254, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1790224, Length=277, Percent_Identity=25.6317689530686, Blast_Score=76, Evalue=3e-15, Organism=Caenorhabditis elegans, GI133931050, Length=214, Percent_Identity=32.7102803738318, Blast_Score=77, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6320148, Length=298, Percent_Identity=24.496644295302, Blast_Score=66, Evalue=7e-12, Organism=Drosophila melanogaster, GI21355443, Length=257, Percent_Identity=25.2918287937743, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI24644084, Length=257, Percent_Identity=25.2918287937743, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005771 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.9 [H]
Molecular weight: Translated: 32113; Mature: 31982
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQRIRKAVFPVAGLGTRFLPATKTVPKEMLPIIDKPLIQYAVDEAIQAGCDTLIFVTNR CCHHHHHHHCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECH YKHSIADYFDKAYELEQKLERAGKLEQLELVRHALPEGVRAIFVTQAEALGLGHAVLCAK HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEEHHHHHCCCHHHHHHH AVVGDEPFAVLLPDDLMWNRGDAALTQMADVAEASGGSVIAVEDVPQEKTASYGIVSTDA HHHCCCCEEEEECCHHCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHCCCCEEECCC FDGRKGRITAIVEKPKPEVAPSNLAVVGRYVLSPKIFEFLEATGAGAGGEIQLTDAIAEL CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCEEEEHHHHHHH LKKEQVDAFRFQGRRFDCGAHIGLIEATVHFALEHEKHGGPAKEILRNALAQADARG HHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure SQRIRKAVFPVAGLGTRFLPATKTVPKEMLPIIDKPLIQYAVDEAIQAGCDTLIFVTNR CHHHHHHHCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECH YKHSIADYFDKAYELEQKLERAGKLEQLELVRHALPEGVRAIFVTQAEALGLGHAVLCAK HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEEHHHHHCCCHHHHHHH AVVGDEPFAVLLPDDLMWNRGDAALTQMADVAEASGGSVIAVEDVPQEKTASYGIVSTDA HHHCCCCEEEEECCHHCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHCCCCEEECCC FDGRKGRITAIVEKPKPEVAPSNLAVVGRYVLSPKIFEFLEATGAGAGGEIQLTDAIAEL CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCEEEEHHHHHHH LKKEQVDAFRFQGRRFDCGAHIGLIEATVHFALEHEKHGGPAKEILRNALAQADARG HHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA