| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is tagO [H]
Identifier: 84623711
GI number: 84623711
Start: 2272093
End: 2273061
Strand: Direct
Name: tagO [H]
Synonym: XOO_2054
Alternate gene names: 84623711
Gene position: 2272093-2273061 (Clockwise)
Preceding gene: 84623710
Following gene: 84623712
Centisome position: 45.99
GC content: 62.54
Gene sequence:
>969_bases ATGGCGTGGCTGTGGTGCGTGCTGCACCTGCTGGTTGCGGGGCTGGGAACCTGGCTGTTGCGGCGTTATGCCTTGCACCG CCGCTTGCTCGATCATCCCGGCGAACGGCGCAGCCATGTCGTGGCGACGCCGCGTGGCGGCGGCATGGCAATCGTGGCGG CAATCTTGCTGGGCTGCGTCGCGGCAAGTGTGCTGTGGCCAACAGCGAGCCTGACGCTCGGCTGGTTCGCAGTGGGTTTG ATTGCGGTGGCCGGTGTGGGCTGGTGGGACGACCACCGGCCGCTTTCGGCCAGGCTGCGGTTTGCGATCCACCTGGCCGC ATCGGCCTCGTTGGGTGGATTGGTTTGCCATCACACGGGTAGCGTGTGGGATGGGGTGCTCACTGCCGCCGCGTCTGTGG TGTTGATCAACGTCTGGAACTTCATGGACGGCATCAACGGGCTGGCCAGCAGTCAGGCGGCATTGGCTGCCTTCGGATTT TTGCTGGTGGCGCCGGCTGGGTGGTCATGGGCCGGGCTGGCAGTTTCAGCATCGTGCCTGGGATTTATCCCATTCAATTT TCCTCGTGCGCGCATCTTCATGGGCGATGGCGGCAGTGGTGCGCTCGGCTATGTGTTGGCAGCGTTGCTGGCCCTGAACG TGGCGAGTGGTCAGGTGAGCTGGTGGATCAGTTGGTTTCCGTTGACGGCCTTTCTTGTAGACGCCGGCTTCACGCTGCTT GCTCGCCTGCTCGCAGGAGAGCGTTGGTGGGAGCCACATGCGCAGCATGTTTACCAGCGTCTGGCACGTCGGCTTGAGAC GCACGTTCCGGTAACCGGCATTTATTTCGCTTTCAGCGTCGCTGCCGTCTGCTTGTATGTGTTGATCCGCCATAATGCAT TTTGGCAGCAGGTGTCCGGAGCTCTGGTCTGGGGCGTGGGCGCTACTGCAATCTGGCACTTTCTGCGCGATGGACTGCGC AATTCCTGA
Upstream 100 bases:
>100_bases GCACGCGCTGCGGCTTCGGGGCCAAGACGCACCACTGGCAGTGCCCGAGCTGCAAGGAGTGGGGTACGGTCAAACCGTTG TTGAACTACGCGGTGGTCTG
Downstream 100 bases:
>100_bases GTAATGGATTTTTATGATTTCCTCGCGTGACCGTTTGACCAAGGCCCTGCCGCAGATAGCGGTCGTGGTACACGACCTAT TGATGGTGTGGGTGTGCTGG
Product: lipopolysaccharide core biosynthesis protein
Products: UMP; Undecaprenyl N-Acetyl-Alpha-D-Glucosaminyl Pyrophosphate. [C]
Alternate protein names: UDP-GlcNAc:undecaprenyl-phosphate GlcNAc-1-phosphate transferase; Undecaprenyl-Phosphate GlcNAc-1-phosphate transferase [H]
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MAWLWCVLHLLVAGLGTWLLRRYALHRRLLDHPGERRSHVVATPRGGGMAIVAAILLGCVAASVLWPTASLTLGWFAVGL IAVAGVGWWDDHRPLSARLRFAIHLAASASLGGLVCHHTGSVWDGVLTAAASVVLINVWNFMDGINGLASSQAALAAFGF LLVAPAGWSWAGLAVSASCLGFIPFNFPRARIFMGDGGSGALGYVLAALLALNVASGQVSWWISWFPLTAFLVDAGFTLL ARLLAGERWWEPHAQHVYQRLARRLETHVPVTGIYFAFSVAAVCLYVLIRHNAFWQQVSGALVWGVGATAIWHFLRDGLR NS
Sequences:
>Translated_322_residues MAWLWCVLHLLVAGLGTWLLRRYALHRRLLDHPGERRSHVVATPRGGGMAIVAAILLGCVAASVLWPTASLTLGWFAVGL IAVAGVGWWDDHRPLSARLRFAIHLAASASLGGLVCHHTGSVWDGVLTAAASVVLINVWNFMDGINGLASSQAALAAFGF LLVAPAGWSWAGLAVSASCLGFIPFNFPRARIFMGDGGSGALGYVLAALLALNVASGQVSWWISWFPLTAFLVDAGFTLL ARLLAGERWWEPHAQHVYQRLARRLETHVPVTGIYFAFSVAAVCLYVLIRHNAFWQQVSGALVWGVGATAIWHFLRDGLR NS >Mature_321_residues AWLWCVLHLLVAGLGTWLLRRYALHRRLLDHPGERRSHVVATPRGGGMAIVAAILLGCVAASVLWPTASLTLGWFAVGLI AVAGVGWWDDHRPLSARLRFAIHLAASASLGGLVCHHTGSVWDGVLTAAASVVLINVWNFMDGINGLASSQAALAAFGFL LVAPAGWSWAGLAVSASCLGFIPFNFPRARIFMGDGGSGALGYVLAALLALNVASGQVSWWISWFPLTAFLVDAGFTLLA RLLAGERWWEPHAQHVYQRLARRLETHVPVTGIYFAFSVAAVCLYVLIRHNAFWQQVSGALVWGVGATAIWHFLRDGLRN S
Specific function: Catalyzes the formation of undecaprenyl-PP-N- acetylglucosamine. Involved in the synthesis of anionic cell-wall polymers as it mediates the initiation of the linkage unit formation that appears to be common to the two types of teichoic acids attached to t
COG id: COG0472
COG function: function code M; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 4 family [H]
Homologues:
Organism=Escherichia coli, GI1790218, Length=271, Percent_Identity=28.0442804428044, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000715 - InterPro: IPR018480 [H]
Pfam domain/function: PF00953 Glycos_transf_4 [H]
EC number: 2.7.8.- [C]
Molecular weight: Translated: 34747; Mature: 34616
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWLWCVLHLLVAGLGTWLLRRYALHRRLLDHPGERRSHVVATPRGGGMAIVAAILLGCV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHH AASVLWPTASLTLGWFAVGLIAVAGVGWWDDHRPLSARLRFAIHLAASASLGGLVCHHTG HHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEECCCCCCCEEEECCC SVWDGVLTAAASVVLINVWNFMDGINGLASSQAALAAFGFLLVAPAGWSWAGLAVSASCL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH GFIPFNFPRARIFMGDGGSGALGYVLAALLALNVASGQVSWWISWFPLTAFLVDAGFTLL EEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHH ARLLAGERWWEPHAQHVYQRLARRLETHVPVTGIYFAFSVAAVCLYVLIRHNAFWQQVSG HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCC ALVWGVGATAIWHFLRDGLRNS CEEECHHHHHHHHHHHHHCCCC >Mature Secondary Structure AWLWCVLHLLVAGLGTWLLRRYALHRRLLDHPGERRSHVVATPRGGGMAIVAAILLGCV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHH AASVLWPTASLTLGWFAVGLIAVAGVGWWDDHRPLSARLRFAIHLAASASLGGLVCHHTG HHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEECCCCCCCEEEECCC SVWDGVLTAAASVVLINVWNFMDGINGLASSQAALAAFGFLLVAPAGWSWAGLAVSASCL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH GFIPFNFPRARIFMGDGGSGALGYVLAALLALNVASGQVSWWISWFPLTAFLVDAGFTLL EEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHH ARLLAGERWWEPHAQHVYQRLARRLETHVPVTGIYFAFSVAAVCLYVLIRHNAFWQQVSG HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCC ALVWGVGATAIWHFLRDGLRNS CEEECHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: UDP-N-Acetyl-D-Glucosamine; Undecaprenyl Phosphate [C]
Specific reaction: UDP-N-Acetyl-D-Glucosamine + Undecaprenyl Phosphate = UMP + Undecaprenyl N-Acetyl-Alpha-D-Glucosaminyl Pyrophosphate. [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12101296; 9384377 [H]