| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623668
Identifier: 84623668
GI number: 84623668
Start: 2226833
End: 2227381
Strand: Direct
Name: 84623668
Synonym: XOO_2011
Alternate gene names: NA
Gene position: 2226833-2227381 (Clockwise)
Preceding gene: 84623661
Following gene: 84623670
Centisome position: 45.08
GC content: 68.12
Gene sequence:
>549_bases ATGGTGGATGCAACCCTGCGGCAGCAATTGGCGGCGTACCGACTGCGTTGGCCTGGCGAAGCCGCACTGGCCGAGCAGTT CGCGCAATTGCTGGACGATGCCACCGATCCGTTCGTGCGTGAGCGTGTCGAAGGTCATTTCACCGGGTCGGCGTGGGTGG TCAGTGCCGATGGCACGCGCACCTTGCTGACCCACCACCGCAAGCTGCAGCGCTGGCTGCAGCTGGGCGGGCACGCCGAC GGCGACCGCGATCTGGCACAGGTGGCGTTGCGCGAGGCGGAGGAAGAATCCGGGCTCAGCGGGCTGCGGCTGGCGGATGC GGCGTTGTTCGACCTGGACCGTCACTGGATTCCGACACGCGGCGAGGTGGCGGGGCATTGGCACTTCGATGCGCGTTACG TGGTGGTAGCCGGCGCGCACGAGGCGTTCGAAGTCAGCGAAGAATCCCTGGCGCTGGCGTGGCGCCCGATCGTCGCACTG CTGGCGGACCCGGAGCTCGATCCGTCGCTGCGGCGGATGGCGGAGAAGTGGCTGGAGAGCCGGGAGTAG
Upstream 100 bases:
>100_bases CCGCCTACGATGCCAAAGCTATACGCTCACGACAAGCGCGTACGCCGCATGACTGACGATAATGGCCGCTTGGCCCGCAC TGGGCGACCGAGAACGAGCG
Downstream 100 bases:
>100_bases GGATTGGAGATTCGGGATTGGCAGGAGCGGTGGGGCGGTGCCGATCCGCACGGCCAGGCCGAACGTTCATGCCCCTTCGC GCACGCTGACCCGTGAACCA
Product: hypothetical protein
Products: NA
Alternate protein names: Nudix Hydrolase; Nudix Family Hydrolase; NUDIX Family Hydrolase; (Di)Nucleoside Polyphosphate Hydrolase-Like Protein; Hydrolase Nudix Family Protein; NUDIX Family Protein; Nudix Hydrolase Family Protein; ADP-Ribose Pyrophosphatase; (Di)Nucleoside Polyphosphate Hydrolase; Phosphohydrolase MutT/Nudix Family Protein; Nudix Superfamily Hydrolase; Hydrolase NUDIX Family; Hydrolase Nudix
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MVDATLRQQLAAYRLRWPGEAALAEQFAQLLDDATDPFVRERVEGHFTGSAWVVSADGTRTLLTHHRKLQRWLQLGGHAD GDRDLAQVALREAEEESGLSGLRLADAALFDLDRHWIPTRGEVAGHWHFDARYVVVAGAHEAFEVSEESLALAWRPIVAL LADPELDPSLRRMAEKWLESRE
Sequences:
>Translated_182_residues MVDATLRQQLAAYRLRWPGEAALAEQFAQLLDDATDPFVRERVEGHFTGSAWVVSADGTRTLLTHHRKLQRWLQLGGHAD GDRDLAQVALREAEEESGLSGLRLADAALFDLDRHWIPTRGEVAGHWHFDARYVVVAGAHEAFEVSEESLALAWRPIVAL LADPELDPSLRRMAEKWLESRE >Mature_182_residues MVDATLRQQLAAYRLRWPGEAALAEQFAQLLDDATDPFVRERVEGHFTGSAWVVSADGTRTLLTHHRKLQRWLQLGGHAD GDRDLAQVALREAEEESGLSGLRLADAALFDLDRHWIPTRGEVAGHWHFDARYVVVAGAHEAFEVSEESLALAWRPIVAL LADPELDPSLRRMAEKWLESRE
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20497; Mature: 20497
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDATLRQQLAAYRLRWPGEAALAEQFAQLLDDATDPFVRERVEGHFTGSAWVVSADGTR CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEECCCCH TLLTHHRKLQRWLQLGGHADGDRDLAQVALREAEEESGLSGLRLADAALFDLDRHWIPTR HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC GEVAGHWHFDARYVVVAGAHEAFEVSEESLALAWRPIVALLADPELDPSLRRMAEKWLES CCCCEEEECCCEEEEEECCCHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC RE CC >Mature Secondary Structure MVDATLRQQLAAYRLRWPGEAALAEQFAQLLDDATDPFVRERVEGHFTGSAWVVSADGTR CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEECCCCH TLLTHHRKLQRWLQLGGHADGDRDLAQVALREAEEESGLSGLRLADAALFDLDRHWIPTR HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC GEVAGHWHFDARYVVVAGAHEAFEVSEESLALAWRPIVALLADPELDPSLRRMAEKWLES CCCCEEEECCCEEEEEECCCHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC RE CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA