| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623615
Identifier: 84623615
GI number: 84623615
Start: 2163236
End: 2164675
Strand: Direct
Name: 84623615
Synonym: XOO_1958
Alternate gene names: NA
Gene position: 2163236-2164675 (Clockwise)
Preceding gene: 84623614
Following gene: 84623616
Centisome position: 43.79
GC content: 65.62
Gene sequence:
>1440_bases ATGTGCACTGCGGCAAGCGCGCAAACGCCGCCACCGTCGATCGTGCCGACCGACCGTCTGCAGGAAGCTTGGTGGGCGCA GCGACATGCGCAGGTGCTGGAGCAGGTGAAGCAGCACCCGGATGCCAAGCTCCTGCTGATCGGCGATTCGATCACCCAGA ACTACGAAAAAGCCGAGGCGCCGGACGAAGACTTTCAACCGACCTGGCAGACCTTTTACGGCAGCCGCGGCGCACTCAAT CTGGGCTTCGGCGGCGATGGCACCGAAAACGTACTATGGCGGCTGGCCAATGGCGAAGTCGACGGGCTGCACCCGAAGGT CGCACTCGTGCTCATCGGCACCAACAACACCGGTCATCTCGGTCAAACCGCCGAACAGACCCGGCTCGGCATCGATGCGG TGGTCGCAGCGATCGAACAAAAGCTGCCGCGCACGCACATCCTGTTGCTGAGTGTGTTGCCCAGCGATATTTCCAGCGAA AAGTCGCGGCGCGATGCGCAGATCAACCAGGGCTTGGCCGTGCGTTACGGCGACAACCCGCGCGTGACCTATCTGGATGT GAGCTCGATCTTCCAGCGCGACGGCAAGCTGCGCACCGAGTTGTTCTACGACACCCGGTTCCGTCCGTCGGCCGGTGCGT TGCATCCGGACATGCAAGGGCAGCGCATGCTGGCCGAAGCGATCGAACCTACGCTGGCGCGGCTGCTGGGCGAGCCGCCG GTCAAGCCGCTGGCCGAACTTGGCCGTGATGCAGCGACCTCGCTGATACCGGTCGACTGGCTGGAGCAGGATTCCTATGA CTGGTACGCGCGCCACCACGCAGCGCTGGCAGCAGCGCGCAGCTTGAAGCCGGAGGTGGTGATGATCGGCGACTCGATCA CGCACTTCTGGTCCGGGCCGCCGCAGGCCACCCGGGTCAGTGGGCCTGAATCGTGGCAATGGCTGTATGGCAAGCGGCCG GTACTGAATCTGGGCTTCGGCTGGGACCGCACGCAAAACGTGCTGTGGCGCATTCGCCAGGGCGAACTCGATGGCCTGGA TCCGCGCTGGGTGGTGCTGCATATCGGCACCAATAACCTCACTGGCACCGCGCAATCGCGCGCCAGCACCCCGGCCGAAG CCGCGTTGGGTGTGCAGGCGGTGGTCGGCGAAGTGCGCCGGCGCCTGCCCGACAGCAAGCTGATCCTGATGGTGATCATG CCGCGTGGCCGCAATGCCGACGACGCGCGGCGCGCGCCAATTGCCGAGACCAACCGGCTGCTGGTCGCGCGCTACGCCAA AGACCCCGCAGTGCGCCTGGTCGATATCGGCCCGAAACTGGTGCAAGCCGACGGCACGCTGCCCGAAGCGCTGATGCCGG ACGGCACCCATCCCAGCGAAGCTGGCTACCGCATCTGGGCGCACGCCTTGCGCGAGGCCGGGATTACCGCTGCGCCGTAA
Upstream 100 bases:
>100_bases CGTGTCTGGTGCGCGCATGTCCTGGTCTTCGCACGCTACGACGTCTCGCGTTTCCCTGTCTGGCCTCGCGCGCACGCTTT GCTGTTTGGGGCTATTGCTG
Downstream 100 bases:
>100_bases AGCAGGTAGCACTCGGGCGCGTGCATCGAAAGGCCGGTGTAGCGGGTGAGCGCGACGGTGCTGCCACCGGCGCGTGCAAC CTCGCGCGCGCCACGGATGA
Product: acetylhydrolase
Products: NA
Alternate protein names: GDSL Family Lipase; Acetylhydrolase; Mucin-Desulfating Sulfatase; 1-Alkyl-2-Acetylglycerophosphocholine Esterase; Exo-1 4-Beta-Glucosidase; Sialate O-Acetylesterase; Acetylhydrolase Lipase_gdsl Protein; GDSL-Like Lipase/Acylhydrolase Domain-Containing Protein; 1 4-Beta-D-Glucan Glucohydrolase Cel3D; Glycoside Hydrolase Family 3 Domain Protein; Lipolytic G-D-S-L; GDSL-Like Lipase/Acylhydrolase; Lipolytic GDSL Family; Lipase/Acylhydrolase Family Protein; Platelet-Activating Factor Acetylhydrolase IB Gamma Subunit
Number of amino acids: Translated: 479; Mature: 479
Protein sequence:
>479_residues MCTAASAQTPPPSIVPTDRLQEAWWAQRHAQVLEQVKQHPDAKLLLIGDSITQNYEKAEAPDEDFQPTWQTFYGSRGALN LGFGGDGTENVLWRLANGEVDGLHPKVALVLIGTNNTGHLGQTAEQTRLGIDAVVAAIEQKLPRTHILLLSVLPSDISSE KSRRDAQINQGLAVRYGDNPRVTYLDVSSIFQRDGKLRTELFYDTRFRPSAGALHPDMQGQRMLAEAIEPTLARLLGEPP VKPLAELGRDAATSLIPVDWLEQDSYDWYARHHAALAAARSLKPEVVMIGDSITHFWSGPPQATRVSGPESWQWLYGKRP VLNLGFGWDRTQNVLWRIRQGELDGLDPRWVVLHIGTNNLTGTAQSRASTPAEAALGVQAVVGEVRRRLPDSKLILMVIM PRGRNADDARRAPIAETNRLLVARYAKDPAVRLVDIGPKLVQADGTLPEALMPDGTHPSEAGYRIWAHALREAGITAAP
Sequences:
>Translated_479_residues MCTAASAQTPPPSIVPTDRLQEAWWAQRHAQVLEQVKQHPDAKLLLIGDSITQNYEKAEAPDEDFQPTWQTFYGSRGALN LGFGGDGTENVLWRLANGEVDGLHPKVALVLIGTNNTGHLGQTAEQTRLGIDAVVAAIEQKLPRTHILLLSVLPSDISSE KSRRDAQINQGLAVRYGDNPRVTYLDVSSIFQRDGKLRTELFYDTRFRPSAGALHPDMQGQRMLAEAIEPTLARLLGEPP VKPLAELGRDAATSLIPVDWLEQDSYDWYARHHAALAAARSLKPEVVMIGDSITHFWSGPPQATRVSGPESWQWLYGKRP VLNLGFGWDRTQNVLWRIRQGELDGLDPRWVVLHIGTNNLTGTAQSRASTPAEAALGVQAVVGEVRRRLPDSKLILMVIM PRGRNADDARRAPIAETNRLLVARYAKDPAVRLVDIGPKLVQADGTLPEALMPDGTHPSEAGYRIWAHALREAGITAAP >Mature_479_residues MCTAASAQTPPPSIVPTDRLQEAWWAQRHAQVLEQVKQHPDAKLLLIGDSITQNYEKAEAPDEDFQPTWQTFYGSRGALN LGFGGDGTENVLWRLANGEVDGLHPKVALVLIGTNNTGHLGQTAEQTRLGIDAVVAAIEQKLPRTHILLLSVLPSDISSE KSRRDAQINQGLAVRYGDNPRVTYLDVSSIFQRDGKLRTELFYDTRFRPSAGALHPDMQGQRMLAEAIEPTLARLLGEPP VKPLAELGRDAATSLIPVDWLEQDSYDWYARHHAALAAARSLKPEVVMIGDSITHFWSGPPQATRVSGPESWQWLYGKRP VLNLGFGWDRTQNVLWRIRQGELDGLDPRWVVLHIGTNNLTGTAQSRASTPAEAALGVQAVVGEVRRRLPDSKLILMVIM PRGRNADDARRAPIAETNRLLVARYAKDPAVRLVDIGPKLVQADGTLPEALMPDGTHPSEAGYRIWAHALREAGITAAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI225543099, Length=214, Percent_Identity=32.2429906542056, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI225543097, Length=214, Percent_Identity=32.2429906542056, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI4505587, Length=214, Percent_Identity=32.2429906542056, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI4505585, Length=205, Percent_Identity=30.2439024390244, Blast_Score=105, Evalue=9e-23, Organism=Homo sapiens, GI296080768, Length=141, Percent_Identity=35.4609929078014, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI296080766, Length=127, Percent_Identity=37.7952755905512, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI296080770, Length=121, Percent_Identity=38.0165289256198, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI24642291, Length=197, Percent_Identity=30.9644670050761, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI24642289, Length=197, Percent_Identity=30.9644670050761, Blast_Score=100, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52700; Mature: 52700
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCTAASAQTPPPSIVPTDRLQEAWWAQRHAQVLEQVKQHPDAKLLLIGDSITQNYEKAEA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCHHHHCC PDEDFQPTWQTFYGSRGALNLGFGGDGTENVLWRLANGEVDGLHPKVALVLIGTNNTGHL CCCCCCCHHHHHCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCC GQTAEQTRLGIDAVVAAIEQKLPRTHILLLSVLPSDISSEKSRRDAQINQGLAVRYGDNP CCCHHHHHHHHHHHHHHHHHHCCHHEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCC RVTYLDVSSIFQRDGKLRTELFYDTRFRPSAGALHPDMQGQRMLAEAIEPTLARLLGEPP CEEEEEHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC VKPLAELGRDAATSLIPVDWLEQDSYDWYARHHAALAAARSLKPEVVMIGDSITHFWSGP CHHHHHCCHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHCCCC PQATRVSGPESWQWLYGKRPVLNLGFGWDRTQNVLWRIRQGELDGLDPRWVVLHIGTNNL CCCCCCCCCCCCCEECCCCCEEEECCCCCHHHHHHHEEECCCCCCCCCCEEEEEECCCCC TGTAQSRASTPAEAALGVQAVVGEVRRRLPDSKLILMVIMPRGRNADDARRAPIAETNRL CCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHCCCCCCCCCE LVARYAKDPAVRLVDIGPKLVQADGTLPEALMPDGTHPSEAGYRIWAHALREAGITAAP EEEEECCCCCEEEEECCCEEEECCCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MCTAASAQTPPPSIVPTDRLQEAWWAQRHAQVLEQVKQHPDAKLLLIGDSITQNYEKAEA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCHHHHCC PDEDFQPTWQTFYGSRGALNLGFGGDGTENVLWRLANGEVDGLHPKVALVLIGTNNTGHL CCCCCCCHHHHHCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCC GQTAEQTRLGIDAVVAAIEQKLPRTHILLLSVLPSDISSEKSRRDAQINQGLAVRYGDNP CCCHHHHHHHHHHHHHHHHHHCCHHEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCC RVTYLDVSSIFQRDGKLRTELFYDTRFRPSAGALHPDMQGQRMLAEAIEPTLARLLGEPP CEEEEEHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC VKPLAELGRDAATSLIPVDWLEQDSYDWYARHHAALAAARSLKPEVVMIGDSITHFWSGP CHHHHHCCHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHCCCC PQATRVSGPESWQWLYGKRPVLNLGFGWDRTQNVLWRIRQGELDGLDPRWVVLHIGTNNL CCCCCCCCCCCCCEECCCCCEEEECCCCCHHHHHHHEEECCCCCCCCCCEEEEEECCCCC TGTAQSRASTPAEAALGVQAVVGEVRRRLPDSKLILMVIMPRGRNADDARRAPIAETNRL CCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHCCCCCCCCCE LVARYAKDPAVRLVDIGPKLVQADGTLPEALMPDGTHPSEAGYRIWAHALREAGITAAP EEEEECCCCCEEEEECCCEEEECCCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA