| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is yfjG [C]
Identifier: 84623562
GI number: 84623562
Start: 2104211
End: 2104642
Strand: Direct
Name: yfjG [C]
Synonym: XOO_1905
Alternate gene names: 84623562
Gene position: 2104211-2104642 (Clockwise)
Preceding gene: 84623556
Following gene: 84623563
Centisome position: 42.59
GC content: 64.35
Gene sequence:
>432_bases ATGCCTACCATCCGTCGCAGCGCCCTGGTCGAACACAGCGCCACCTGCATGTTCGATCTGGTCAATGATGTCGAAGCCTA TCCGCGCCGCTTCGGCTGGTGCGACGCTGCCCATGTGCTCGAAAAGGACCAGGCGCATGTCGTGGCGCGCCTGGATCTGG GGCTGGGGTCGTTCCGCACCTGGTTCACCACCGAGAACATCCTTGAGCGCCCCGAGCGCATCGTCATGCACTTGCGCGAG GGCCCGTTCAAGCGATTGGAAGGCCTGTGGGAATTCCAGGCGCTGAGCGAGAACGCTTGCAAGGTGAGTCTGACCCTGGA ACTGGAGACCAGCTCGCGCTTGCTGGGCCCTGCGCTGGCGCTGGGGTTCCAGGGCCTGGCCGATCGCATGGTCAACGATT TCGTACGCGTCGCCGACCGCGGCGAGGTCTAG
Upstream 100 bases:
>100_bases TCGCGCCGTTTGCTTTATCCTTGGTGGGTTTCTTGTTCATCCGCCCATTGTCGCCGATTCGGCGTCGTCAAACGATCTTC CGTCTTTCACAAGTTAGCGA
Downstream 100 bases:
>100_bases GCAGCGCTGCCGTATGCGCATCGAGGTCGTGCTGGCCTGGCCGGATCACTACAGTGCGGTGCAACTGGACTTGCCCGACG GCGCAACGGTGGCAGATGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MPTIRRSALVEHSATCMFDLVNDVEAYPRRFGWCDAAHVLEKDQAHVVARLDLGLGSFRTWFTTENILERPERIVMHLRE GPFKRLEGLWEFQALSENACKVSLTLELETSSRLLGPALALGFQGLADRMVNDFVRVADRGEV
Sequences:
>Translated_143_residues MPTIRRSALVEHSATCMFDLVNDVEAYPRRFGWCDAAHVLEKDQAHVVARLDLGLGSFRTWFTTENILERPERIVMHLRE GPFKRLEGLWEFQALSENACKVSLTLELETSSRLLGPALALGFQGLADRMVNDFVRVADRGEV >Mature_142_residues PTIRRSALVEHSATCMFDLVNDVEAYPRRFGWCDAAHVLEKDQAHVVARLDLGLGSFRTWFTTENILERPERIVMHLREG PFKRLEGLWEFQALSENACKVSLTLELETSSRLLGPALALGFQGLADRMVNDFVRVADRGEV
Specific function: Unknown
COG id: COG2867
COG function: function code I; Oligoketide cyclase/lipid transport protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0083 family [H]
Homologues:
Organism=Escherichia coli, GI1788972, Length=134, Percent_Identity=38.8059701492537, Blast_Score=106, Evalue=5e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005031 [H]
Pfam domain/function: PF03364 Polyketide_cyc [H]
EC number: NA
Molecular weight: Translated: 16231; Mature: 16100
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTIRRSALVEHSATCMFDLVNDVEAYPRRFGWCDAAHVLEKDQAHVVARLDLGLGSFRT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHEEEEEECCCCCHHH WFTTENILERPERIVMHLREGPFKRLEGLWEFQALSENACKVSLTLELETSSRLLGPALA HHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHH LGFQGLADRMVNDFVRVADRGEV HHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PTIRRSALVEHSATCMFDLVNDVEAYPRRFGWCDAAHVLEKDQAHVVARLDLGLGSFRT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHEEEEEECCCCCHHH WFTTENILERPERIVMHLREGPFKRLEGLWEFQALSENACKVSLTLELETSSRLLGPALA HHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHH LGFQGLADRMVNDFVRVADRGEV HHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA