| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is bfr [H]
Identifier: 84623542
GI number: 84623542
Start: 2081362
End: 2081847
Strand: Direct
Name: bfr [H]
Synonym: XOO_1885
Alternate gene names: 84623542
Gene position: 2081362-2081847 (Clockwise)
Preceding gene: 84623538
Following gene: 84623545
Centisome position: 42.13
GC content: 60.29
Gene sequence:
>486_bases ATGAAAGGCCATCCCGAAGTCGTCGATTACCTCAAGCAGCTGCTACGCGGCGAATTGGCGGCGCGCGATCAATATTTCCT GCATTCACGCCGCTACGAGGATCAGGGGCTGATGGCGCTGTACGAGCGCATCAACCATGAGATGGAAGAAGAAACCGAGC ACGCCGACGCGTTGTTGCGGCGCATCCTGTTTCTGGAAGGCGACCCGGACATGCGACCAGCCGAGTTTGCGCCCGGCAAG ACCGTGGTGGAGATGCTCGAGCGCGATCTGGTCGTCGAATACGAAGTGCGCGCCGCGCTCGCCGCCGGCATGAAGCTGTG CGAAGACCACGGCGATTACGTTAGCCGCGACATATTGCTCAAGCAGCTGCAGGACACCGAAGAAGATCATGCGTGGTGGC TGGAGCAGCAGCTTGGCCTGATCAAGCGCATCGGTCTGGAGCTGTACCAGACCTCGAAGATCGACAAGGGCCACGCTGCC GGTTGA
Upstream 100 bases:
>100_bases GTGGCGGGTCTGGCCGCAAGCGCAACTGAAAGTGATTCCGATTAGATCATTGCACGCCTGCTTAGGGCACCATGCGCGCA TTGCGTCGTTGGAGCACACC
Downstream 100 bases:
>100_bases GCCGGCAGCCCACGCTGCGCAGTCGTCTGGCTGACGCAGCGTGGGTATCGGCTCGGCATGGAGTACGAGTGCCTTGCCAT TCGCGACGATTTGCTGATGA
Product: bacterioferritin
Products: NA
Alternate protein names: BFR [H]
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MKGHPEVVDYLKQLLRGELAARDQYFLHSRRYEDQGLMALYERINHEMEEETEHADALLRRILFLEGDPDMRPAEFAPGK TVVEMLERDLVVEYEVRAALAAGMKLCEDHGDYVSRDILLKQLQDTEEDHAWWLEQQLGLIKRIGLELYQTSKIDKGHAA G
Sequences:
>Translated_161_residues MKGHPEVVDYLKQLLRGELAARDQYFLHSRRYEDQGLMALYERINHEMEEETEHADALLRRILFLEGDPDMRPAEFAPGK TVVEMLERDLVVEYEVRAALAAGMKLCEDHGDYVSRDILLKQLQDTEEDHAWWLEQQLGLIKRIGLELYQTSKIDKGHAA G >Mature_161_residues MKGHPEVVDYLKQLLRGELAARDQYFLHSRRYEDQGLMALYERINHEMEEETEHADALLRRILFLEGDPDMRPAEFAPGK TVVEMLERDLVVEYEVRAALAAGMKLCEDHGDYVSRDILLKQLQDTEEDHAWWLEQQLGLIKRIGLELYQTSKIDKGHAA G
Specific function: May perform analogous functions in iron detoxification and storage to that of animal ferritins [H]
COG id: COG2193
COG function: function code P; Bacterioferritin (cytochrome b1)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
Organism=Escherichia coli, GI1789733, Length=155, Percent_Identity=41.2903225806452, Blast_Score=108, Evalue=2e-25,
Paralogues:
None
Copy number: 1639 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002024 - InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: NA
Molecular weight: Translated: 18694; Mature: 18694
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS50905 FERRITIN_LIKE ; PS00549 BACTERIOFERRITIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGHPEVVDYLKQLLRGELAARDQYFLHSRRYEDQGLMALYERINHEMEEETEHADALLR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RILFLEGDPDMRPAEFAPGKTVVEMLERDLVVEYEVRAALAAGMKLCEDHGDYVSRDILL HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQLQDTEEDHAWWLEQQLGLIKRIGLELYQTSKIDKGHAAG HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKGHPEVVDYLKQLLRGELAARDQYFLHSRRYEDQGLMALYERINHEMEEETEHADALLR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RILFLEGDPDMRPAEFAPGKTVVEMLERDLVVEYEVRAALAAGMKLCEDHGDYVSRDILL HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQLQDTEEDHAWWLEQQLGLIKRIGLELYQTSKIDKGHAAG HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]