| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623483
Identifier: 84623483
GI number: 84623483
Start: 2009627
End: 2010685
Strand: Direct
Name: 84623483
Synonym: XOO_1826
Alternate gene names: NA
Gene position: 2009627-2010685 (Clockwise)
Preceding gene: 84623477
Following gene: 84623484
Centisome position: 40.68
GC content: 63.17
Gene sequence:
>1059_bases ATGCCGGTGTCTGCTGTCCAACCATCCATGAAGAAGAGAGACGGACGTTTGGTATCGCGGGCGGCGCTGGAAGAAATGCG CCTGATGGCGTTGCAACGGATGGGCGAAGGCGAATCGCCGGCCGAAGTGGCCGCGTCGTTCGGATTGCATCGCGGCTGGG CGTACAAAGTGCTGGCGCGAGCACAGGAGGGCGGCGCTGGCGCATTGATGACGCGTAATGGCAGCGGTCGCCCGCGGACG TTGACGCCGGCGCAGGAGCGCCAGGTGTTCGGCTGGGTCAATGGCAAGAACCCTCGCCAGCATGGCTTCGACTTCGGTTT GTGGACGCGGCAGGTCGTGCGTGAACTGATCGAGAAGAAATGTGCCGCACGGTTGAGTTTGGCCAGCGTCGGGACGTTGC TGGCGCGGCTGGGGCTGAGCCTACAGAAGCCGCTGCAACACGCCTATCAGCGCGATCCACTGGCGGTAGCACAGTGGCAG GAGCAGACGTCCCCGGCGATCGTGACGCACGCCAAGCGGGAAAAGGCCGAGATTGACTTCTGGGACGAGTCTGGCTTCCG TGCCGATGCGGTGCAAGGACGGACGTGGGCCGTCAAGGGCGTCACGCCGGTTGTCGCGGTGCCGGGGCAGCGCCAGAGCA TCAGTGCGGCCTCGGCGGTGAACAGCAAGGGCGGTTTCTGGTTCGCCGTGTACAGCGGCGGCATGAACGGTGAATTGTTC GTGGCCCTGCTCAAGCGAATGATGAAGGGCCGTCGCCGTCCAATCCATCTGGTGCTCGATGGTTTGCCTGCCCACAAGAC CCGTGGCGTGCGCGATGACGTGGACAGCCTGAAGGGCAGGCTGACGCTGCATTTCCTGCCGGGTGACGCGCAGGACTTGA ATCCCGACGAGTTGGTGTGGAGCTACACCAAGCGCACGGGCGTAGCGCGCAGCCCGCTGCGCAGTGGCGAGAAGCTGGCC GATCGGGTGCATGATCAGTTGTCCGACATTGCAGCTCGACCAGAATTGGTGCGCTCATTCTTCAGGCATCCAAGTGTCGC CTATATTTCTGACTTATGA
Upstream 100 bases:
>100_bases GGCGGCAAAGCGGCTGATGGTGAGGTATGCGATCCCGCGCTGCGCGCATAGCGCTTGCGCGTGCCTGCGATTACTCATAA GTCAGTAAATTAGGGAACAA
Downstream 100 bases:
>100_bases GTAAAAGCGCAGCATGTTCAGCACTGCCTGCGCACATTGCGCTCATGGCAGTGGGCAAGCGCCTAGGCAGGCCGGCGGTA GCGACGCAGGGCAATGATGT
Product: ISXoo2 transposase
Products: NA
Alternate protein names: Transposase And Inactivated Derivatives; ISXo7 Transposase; Helix-Turn-Helix Type; Integrase Catalytic Region; ISXoo2 Transposase; Transposase And Inactivated Derivatives-Like Protein; Transposase IS; Transposase Of IS; Cation Diffusion Facilitator Family Transporter; Isxo7 Transposase; Transposase Fragmentary Gene
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MPVSAVQPSMKKRDGRLVSRAALEEMRLMALQRMGEGESPAEVAASFGLHRGWAYKVLARAQEGGAGALMTRNGSGRPRT LTPAQERQVFGWVNGKNPRQHGFDFGLWTRQVVRELIEKKCAARLSLASVGTLLARLGLSLQKPLQHAYQRDPLAVAQWQ EQTSPAIVTHAKREKAEIDFWDESGFRADAVQGRTWAVKGVTPVVAVPGQRQSISAASAVNSKGGFWFAVYSGGMNGELF VALLKRMMKGRRRPIHLVLDGLPAHKTRGVRDDVDSLKGRLTLHFLPGDAQDLNPDELVWSYTKRTGVARSPLRSGEKLA DRVHDQLSDIAARPELVRSFFRHPSVAYISDL
Sequences:
>Translated_352_residues MPVSAVQPSMKKRDGRLVSRAALEEMRLMALQRMGEGESPAEVAASFGLHRGWAYKVLARAQEGGAGALMTRNGSGRPRT LTPAQERQVFGWVNGKNPRQHGFDFGLWTRQVVRELIEKKCAARLSLASVGTLLARLGLSLQKPLQHAYQRDPLAVAQWQ EQTSPAIVTHAKREKAEIDFWDESGFRADAVQGRTWAVKGVTPVVAVPGQRQSISAASAVNSKGGFWFAVYSGGMNGELF VALLKRMMKGRRRPIHLVLDGLPAHKTRGVRDDVDSLKGRLTLHFLPGDAQDLNPDELVWSYTKRTGVARSPLRSGEKLA DRVHDQLSDIAARPELVRSFFRHPSVAYISDL >Mature_351_residues PVSAVQPSMKKRDGRLVSRAALEEMRLMALQRMGEGESPAEVAASFGLHRGWAYKVLARAQEGGAGALMTRNGSGRPRTL TPAQERQVFGWVNGKNPRQHGFDFGLWTRQVVRELIEKKCAARLSLASVGTLLARLGLSLQKPLQHAYQRDPLAVAQWQE QTSPAIVTHAKREKAEIDFWDESGFRADAVQGRTWAVKGVTPVVAVPGQRQSISAASAVNSKGGFWFAVYSGGMNGELFV ALLKRMMKGRRRPIHLVLDGLPAHKTRGVRDDVDSLKGRLTLHFLPGDAQDLNPDELVWSYTKRTGVARSPLRSGEKLAD RVHDQLSDIAARPELVRSFFRHPSVAYISDL
Specific function: Unknown
COG id: COG3335
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38887; Mature: 38756
Theoretical pI: Translated: 11.01; Mature: 11.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVSAVQPSMKKRDGRLVSRAALEEMRLMALQRMGEGESPAEVAASFGLHRGWAYKVLAR CCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHH AQEGGAGALMTRNGSGRPRTLTPAQERQVFGWVNGKNPRQHGFDFGLWTRQVVRELIEKK HCCCCCEEEEECCCCCCCCCCCCHHHCCEEEEECCCCCHHCCCCHHHHHHHHHHHHHHHH CAARLSLASVGTLLARLGLSLQKPLQHAYQRDPLAVAQWQEQTSPAIVTHAKREKAEIDF HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHCCCCCEEECCHHHCCCCEE WDESGFRADAVQGRTWAVKGVTPVVAVPGQRQSISAASAVNSKGGFWFAVYSGGMNGELF ECCCCCEECCCCCCEEEECCCCEEEECCCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHH VALLKRMMKGRRRPIHLVLDGLPAHKTRGVRDDVDSLKGRLTLHFLPGDAQDLNPDELVW HHHHHHHHHCCCCCEEEEEECCCCHHCCCCHHHHHHHCCEEEEEECCCCCCCCCHHHHHH SYTKRTGVARSPLRSGEKLADRVHDQLSDIAARPELVRSFFRHPSVAYISDL HHHHHCCCHHCHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEECCCC >Mature Secondary Structure PVSAVQPSMKKRDGRLVSRAALEEMRLMALQRMGEGESPAEVAASFGLHRGWAYKVLAR CCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHH AQEGGAGALMTRNGSGRPRTLTPAQERQVFGWVNGKNPRQHGFDFGLWTRQVVRELIEKK HCCCCCEEEEECCCCCCCCCCCCHHHCCEEEEECCCCCHHCCCCHHHHHHHHHHHHHHHH CAARLSLASVGTLLARLGLSLQKPLQHAYQRDPLAVAQWQEQTSPAIVTHAKREKAEIDF HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHCCCCCEEECCHHHCCCCEE WDESGFRADAVQGRTWAVKGVTPVVAVPGQRQSISAASAVNSKGGFWFAVYSGGMNGELF ECCCCCEECCCCCCEEEECCCCEEEECCCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHH VALLKRMMKGRRRPIHLVLDGLPAHKTRGVRDDVDSLKGRLTLHFLPGDAQDLNPDELVW HHHHHHHHHCCCCCEEEEEECCCCHHCCCCHHHHHHHCCEEEEEECCCCCCCCCHHHHHH SYTKRTGVARSPLRSGEKLADRVHDQLSDIAARPELVRSFFRHPSVAYISDL HHHHHCCCHHCHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA