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The map label for this gene is ydhP [H]

Identifier: 84623453

GI number: 84623453

Start: 1982213

End: 1983424

Strand: Direct

Name: ydhP [H]

Synonym: XOO_1796

Alternate gene names: 84623453

Gene position: 1982213-1983424 (Clockwise)

Preceding gene: 84623450

Following gene: 84623454

Centisome position: 40.12

GC content: 64.6

Gene sequence:

>1212_bases
ATGACCGATACCGATCTTTCTTCGCCACGCGTGTCCCGGCGCGATTACGTGCTGATTCTGCTTGCGCTGGCGATGGGCGG
CTTTGCGATCGGCATCAGCGAATTCTCCACCATGGGCCTGATGACGCAGATTGCGCAGGGCTTGCAGATCAGCGAGCCGC
AGGTCGGCCACGTCATCAGCGCGTATGCCCTGGGCGTTGTGGTCGGTGCGCCCTTGCTGGCGATTCTGGGGGCGCGCTGG
CCGCGGCGCACCTTGTTGCTGCTGTTGATGGTGTTCTATGCGCTGGGCAATGTGGCCAGCGCATTGGCACCGAGCTACTA
CACCATGCTGCTGTGCCGCTTTATCGCCGGGCTGCCGCATGGCGCGTACTTCGGCGTTGCGTCGCTGGTAGCCGCATCGA
TCAGCCCACCCAATCAACGTGCCACTGCAGTGGGGCGGGTCTTGTTGGGGTTGAGCGTCGCGTTGCTGGTGGGCAATCCG
CTGGCGACCTGGCTGGGGCAAATCGTGAGCTGGCGCTGGGCCTATGCATCGGTCTCGGTGATTGCGCTGGGCACGGTCGC
CGCTGTGGCGATTCTGCTGCCTCCGCAGCCCGACGAGCCGCGTCAGCAGCCGCTGCGCGAATTGCGTGCGTTCAATCAGC
CGCAGGTGTGGCTGGCATTGGCGATCGGCGCGGTGGGTTTTTCCGGCATGTTCTGCGTCTTCAGTTACCTTGCGCCGACG
TTGACTGCGGTGACCGGCGTGACCGCAGCGCGCATTCCGCTGGCGATGGTGGCGTTTGGTGTGGGCGGGGTGCTGGGAAG
CATCCTGGGCGGTTGGTTGTTCGACCGCATGCAGTTCTGCGCGGTGCCGGTGTTGCTGGTGTGGTCGGTGATGGTGATGT
TGACGTTTCCGCTGGCCGCGCAGTCAGACATATGGGTGTTCGTTTCCATCGTGGCGGTCGGCACCATGGGCGCCTTGGCG
CCTGCCTTGCAGACACGTTTGATGGACGTGGCGGCAGAAGCGCAGACCCTGGCTGCAGCCTCCAACCATGCAGCATTCAA
TACGGCCAATGCATTGGGTCCATGGCTGGGTGGCATGGCGATCACGGCAGGCTGGGGCTGGACCTCCACCGGCTACGTTG
GCGCGGCCACCGCGCTCGGCGGGTTGCTGGTCTACGCACTGGCGGTGTGGCAGGAGCGTCGCCAGCAGCGCTCGGTCTTG
GCGAATTGCTGA

Upstream 100 bases:

>100_bases
GATGGCTGAGGCGTTGGTGCTGAACCGACTCCGGTGTCGCACTTTCCTGCTCTGTTGCATTGCACAATAATAGGCCGCCC
CGCCATCACTGGAGTCGGGC

Downstream 100 bases:

>100_bases
GGCAGCGCATACCGATGTGGTGTGCGCATCTGGCGCGGCAGTGTGGCGCTAAGTGCCCGCAAATTCGCATCGCTGCGCGG
TTGTATAGAAGATACGCGTG

Product: MFS transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 402

Protein sequence:

>403_residues
MTDTDLSSPRVSRRDYVLILLALAMGGFAIGISEFSTMGLMTQIAQGLQISEPQVGHVISAYALGVVVGAPLLAILGARW
PRRTLLLLLMVFYALGNVASALAPSYYTMLLCRFIAGLPHGAYFGVASLVAASISPPNQRATAVGRVLLGLSVALLVGNP
LATWLGQIVSWRWAYASVSVIALGTVAAVAILLPPQPDEPRQQPLRELRAFNQPQVWLALAIGAVGFSGMFCVFSYLAPT
LTAVTGVTAARIPLAMVAFGVGGVLGSILGGWLFDRMQFCAVPVLLVWSVMVMLTFPLAAQSDIWVFVSIVAVGTMGALA
PALQTRLMDVAAEAQTLAAASNHAAFNTANALGPWLGGMAITAGWGWTSTGYVGAATALGGLLVYALAVWQERRQQRSVL
ANC

Sequences:

>Translated_403_residues
MTDTDLSSPRVSRRDYVLILLALAMGGFAIGISEFSTMGLMTQIAQGLQISEPQVGHVISAYALGVVVGAPLLAILGARW
PRRTLLLLLMVFYALGNVASALAPSYYTMLLCRFIAGLPHGAYFGVASLVAASISPPNQRATAVGRVLLGLSVALLVGNP
LATWLGQIVSWRWAYASVSVIALGTVAAVAILLPPQPDEPRQQPLRELRAFNQPQVWLALAIGAVGFSGMFCVFSYLAPT
LTAVTGVTAARIPLAMVAFGVGGVLGSILGGWLFDRMQFCAVPVLLVWSVMVMLTFPLAAQSDIWVFVSIVAVGTMGALA
PALQTRLMDVAAEAQTLAAASNHAAFNTANALGPWLGGMAITAGWGWTSTGYVGAATALGGLLVYALAVWQERRQQRSVL
ANC
>Mature_402_residues
TDTDLSSPRVSRRDYVLILLALAMGGFAIGISEFSTMGLMTQIAQGLQISEPQVGHVISAYALGVVVGAPLLAILGARWP
RRTLLLLLMVFYALGNVASALAPSYYTMLLCRFIAGLPHGAYFGVASLVAASISPPNQRATAVGRVLLGLSVALLVGNPL
ATWLGQIVSWRWAYASVSVIALGTVAAVAILLPPQPDEPRQQPLRELRAFNQPQVWLALAIGAVGFSGMFCVFSYLAPTL
TAVTGVTAARIPLAMVAFGVGGVLGSILGGWLFDRMQFCAVPVLLVWSVMVMLTFPLAAQSDIWVFVSIVAVGTMGALAP
ALQTRLMDVAAEAQTLAAASNHAAFNTANALGPWLGGMAITAGWGWTSTGYVGAATALGGLLVYALAVWQERRQQRSVLA
NC

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=384, Percent_Identity=39.84375, Blast_Score=228, Evalue=5e-61,
Organism=Escherichia coli, GI1786595, Length=384, Percent_Identity=33.3333333333333, Blast_Score=202, Evalue=3e-53,
Organism=Escherichia coli, GI145693198, Length=265, Percent_Identity=24.1509433962264, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1787808, Length=380, Percent_Identity=25, Blast_Score=92, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42314; Mature: 42183

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTDLSSPRVSRRDYVLILLALAMGGFAIGISEFSTMGLMTQIAQGLQISEPQVGHVIS
CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
AYALGVVVGAPLLAILGARWPRRTLLLLLMVFYALGNVASALAPSYYTMLLCRFIAGLPH
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GAYFGVASLVAASISPPNQRATAVGRVLLGLSVALLVGNPLATWLGQIVSWRWAYASVSV
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
IALGTVAAVAILLPPQPDEPRQQPLRELRAFNQPQVWLALAIGAVGFSGMFCVFSYLAPT
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LTAVTGVTAARIPLAMVAFGVGGVLGSILGGWLFDRMQFCAVPVLLVWSVMVMLTFPLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QSDIWVFVSIVAVGTMGALAPALQTRLMDVAAEAQTLAAASNHAAFNTANALGPWLGGMA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHCCEE
ITAGWGWTSTGYVGAATALGGLLVYALAVWQERRQQRSVLANC
EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TDTDLSSPRVSRRDYVLILLALAMGGFAIGISEFSTMGLMTQIAQGLQISEPQVGHVIS
CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
AYALGVVVGAPLLAILGARWPRRTLLLLLMVFYALGNVASALAPSYYTMLLCRFIAGLPH
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GAYFGVASLVAASISPPNQRATAVGRVLLGLSVALLVGNPLATWLGQIVSWRWAYASVSV
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
IALGTVAAVAILLPPQPDEPRQQPLRELRAFNQPQVWLALAIGAVGFSGMFCVFSYLAPT
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LTAVTGVTAARIPLAMVAFGVGGVLGSILGGWLFDRMQFCAVPVLLVWSVMVMLTFPLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QSDIWVFVSIVAVGTMGALAPALQTRLMDVAAEAQTLAAASNHAAFNTANALGPWLGGMA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHCCEE
ITAGWGWTSTGYVGAATALGGLLVYALAVWQERRQQRSVLANC
EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]